iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Obr-076546

Ensembl Protein ID

OB11G25000.1

UniProt Accession

J3N9L4; J3N9L4_ORYBR

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OB11G25000	OB11G25000.1	OB11G25000.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	3.30e-51	175.2	965	1308

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 4    kNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelw.....kskkkavsprellkalkkeaeefsgyeqqDaq 93
            N gN C +N+vLQ+L+ + elr+ + e     ln      ++g++l +l++lf++        +++   +  ++++ ++++ + ++++e +D+ 
   Q: 965  PNSGNICHFNAVLQSLLVLDELRRKMIE-----LNV-----QHGTILLELKDLFKKTSagtnyAEDTLEREAGKVFDEMCSKGPDYKKSEMNDSI 1049
           69**************************.....443.....368*************76665456666677777********************* PP
   S: 94   EflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeetkke... 185
           + l+ ll+ l++e                            +   +++++ +F+++++++++c++c+ +s++ ++ l+lsl++p k++  +e   
   Q: 1050 DTLNLLLNCLKKED---------------------------EGNDSTIVNPTFRFEMSTTVTCKRCKGQSTSPQEGLYLSLDLPAKKHL-PEcas 1116
           **********9987...........................4567899**************************************965.447** PP
   S: 186  .................................slqdcLesftkeeelegenkyycekck........kkqeaekklklkklPevLilhLkRfsf 239
                                            s++ c+++f++ e  +    y c++c+        +k  a+k++ ++k+++vLi++LkR+ +
   Q: 1117 lpptdrdqnrdiditthkinnindgvydiddpiSIEICFDNFVSDELSD----YVCQHCNgtdgntvdQKGSATKQIFITKVSPVLIVQLKRY-W 1206
           ********************************************99887....*******777777776677*********************.9 PP
   S: 240  seeqksrekinkkvefpleLdlspfctspeekqkekkkYeLiavvvHsG.slssGHYvayvkn.....ekgk..WllfdDskVtevkeeevleet 326
           ++ ++s++k+ + v+f + Ld++++++ + +++ +k++Y L+av+ H+G sl+ GHY+ayv+      +++k  W + +D +++e+++eevle  
   Q: 1207 QSPEGSPKKLMSGVKFEELLDITKYMEARPSEN-TKCIYHLVAVIQHTGnSLDAGHYTAYVRAnriagQEKKilWAHANDANIKECSQEEVLE-- 1298
           9999*************99*****999865554.59***************************77666455589*******************.. PP
   S: 327  gstaYvlfYkr 337
            ++aY+lfY++
   Q: 1299 -RQAYILFYEQ 1308
           .********97 PP

Organism

Oryza brachyantha

Protein Sequence
(Fasta)

MAIVNWLRLE QSSWKAVAIV GPVGSGKTTL AAQVYDEISG QFDCSVQVSA ASSHTADISK 60
ALTYILSLVD PGYHNKKTEP PENWLGLTAS MHTCLNAKRY IILIDDIWDS KFLSRIFYAF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGATCG TCAATTGGCT ACGGCTCGAA CAGAGCTCGT GGAAAGCGGT CGCCATCGTT 60
GGACCCGTCG GGTCGGGAAA GACTACCCTC GCTGCTCAAG TGTACGATGA AATCAGCGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR009072--Histone-fold
IPR032675--L_dom-like
IPR002182--NB-ARC
IPR027417--P-loop_NTPase
IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom
IPR011991--WHTH_DNA-bd_dom

PROSITE

PS00973--USP_2
PS50235--USP_3

Pfam

PF00931--NB-ARC
PF00443--UCH

Gene Ontology

GO:0043531--F:ADP binding
GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Cho-024877	Choloepus hoffmanni	38.58	8.00e-15	74.70
IUUC-Olo-081076	Oryza longistaminata	44.58	3.00e-111	395.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence