iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSRNOG00000015213.8	ENSRNOT00000071614.2	ENSRNOP00000066555.2
ENSRNOG00000015213.8	ENSRNOT00000020412.8	ENSRNOP00000020412.7

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
RAID2
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/Other/Other	69.23	2.00e-75	279.00	IUUC-Hsa-046921

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MWTFGRRAAA GLLPRTASRA SAWVRNPRGR ERIGTCGRRG LHVTANADAI RHSHLNLHYL 60
GQILNIKKQS VCVVHLRNSG TLGNPSSLDE TAYERLAEET LDALAEFFED LADKPYTLKD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTGGACGT TCGGACGCCG CGCAGCCGCG GGCTTGCTGC CCCGGACGGC CTCCCGGGCC 60
TCCGCCTGGG TCCGGAACCC ACGCGGGAGG GAACGGATTG GAACCTGCGG CCGCCGAGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR017789--Frataxin
IPR002908--Frataxin/CyaY

PROSITE

PS50810--FRATAXIN_2

Pfam

PF01491--Frataxin_Cyay

PRINTS

PR00904--FRATAXIN

SMART

SM01219--Frataxin_Cyay

Gene Ontology

GO:0005829--C:cytosol
GO:0005739--C:mitochondrion
GO:0051537--F:2 iron, 2 sulfur cluster binding
GO:0008199--F:ferric iron binding
GO:0008198--F:ferrous iron binding
GO:0004322--F:ferroxidase activity
GO:0034986--F:iron chaperone activity
GO:0007628--P:adult walking behavior
GO:0009060--P:aerobic respiration
GO:0006879--P:cellular iron ion homeostasis
GO:0070301--P:cellular response to hydrogen peroxide
GO:0009792--P:embryo development ending in birth or egg hatching
GO:0018283--P:iron incorporation into metallo-sulfur cluster
GO:0007005--P:mitochondrion organization
GO:0040015--P:negative regulation of multicellular organism growth
GO:0046621--P:negative regulation of organ growth
GO:0090201--P:negative regulation of release of cytochrome c from mitochondria
GO:0006119--P:oxidative phosphorylation
GO:1904234--P:positive regulation of aconitate hydratase activity
GO:0030307--P:positive regulation of cell growth
GO:0008284--P:positive regulation of cell proliferation
GO:1904231--P:positive regulation of succinate dehydrogenase activity
GO:0019230--P:proprioception
GO:0016540--P:protein autoprocessing
GO:0010722--P:regulation of ferrochelatase activity
GO:0010039--P:response to iron ion

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002122	Ailuropoda melanoleuca	67.15	3.00e-73	267.00
IUUC-Apl-003853	Anas platyrhynchos	74.38	3.00e-50	189.00
IUUC-Aca-005026	Anolis carolinensis	63.95	4.00e-52	196.00
IUUC-Aly-006200	Arabidopsis lyrata	42.22	5.00e-14	70.50
IUUC-Ath-007033	Arabidopsis thaliana	42.22	4.00e-14	71.20
IUUC-Ago-007707	Ashbya gossypii	41.82	2.00e-16	77.00
IUUC-Acl-008146	Aspergillus clavatus	35.54	2.00e-14	72.00
IUUC-Afl-008501	Aspergillus flavus	40.96	2.00e-11	62.40
IUUC-Afu-008851	Aspergillus fumigatus	34.09	2.00e-14	72.80
IUUC-Ani-009129	Aspergillus nidulans	37.11	7.00e-11	60.50
IUUC-Ang-009557	Aspergillus niger	33.86	4.00e-14	71.20
IUUC-Ate-010486	Aspergillus terreus	35.48	2.00e-14	72.00
IUUC-Bgr-012108	Blumeria graminis	35.90	3.00e-10	58.20
IUUC-Bta-013437	Bos taurus	65.88	2.00e-68	251.00
IUUC-Bci-013810	Botrytis cinerea	45.45	1.00e-11	62.80
IUUC-Bdi-014226	Brachypodium distachyon	40.52	2.00e-19	89.00
IUUC-Bol-015092	Brassica oleracea	42.22	2.00e-14	72.00
IUUC-Bra-017945	Brassica rapa	41.24	4.00e-14	70.50
IUUC-Cel-018466	Caenorhabditis elegans	44.04	2.00e-21	94.70
IUUC-Cja-019306	Callithrix jacchus	68.25	8.00e-67	246.00
IUUC-Cfa-020063	Canis familiaris	67.77	3.00e-73	267.00
IUUC-Cpo-021325	Cavia porcellus	71.63	9.00e-81	292.00
IUUC-Cre-022889	Chlamydomonas reinhardtii	44.68	4.00e-16	77.80
IUUC-Csa-023739	Chlorocebus sabaeus	68.27	2.00e-76	278.00
IUUC-Cho-024324	Choloepus hoffmanni	67.30	2.00e-63	234.00
IUUC-Cgl-026402	Colletotrichum gloeosporioides	37.72	1.00e-14	72.80
IUUC-Cne-027094	Cryptococcus neoformans	34.57	1.00e-10	59.70
IUUC-Cme-027112	Cyanidioschyzon merolae	34.45	3.00e-08	51.20
IUUC-Dre-028813	Danio rerio	60.68	2.00e-38	151.00
IUUC-Dno-029949	Dasypus novemcinctus	77.21	5.00e-47	179.00
IUUC-Dse-031482	Dothistroma septosporum	35.59	2.00e-15	75.10
IUUC-Dme-031608	Drosophila melanogaster	44.62	4.00e-27	114.00
IUUC-Ete-032937	Echinops telfairi	73.33	6.00e-07	46.60
IUUC-Eca-033899	Equus caballus	82.35	6.00e-61	226.00
IUUC-Fca-036579	Felis catus	73.26	5.00e-60	223.00
IUUC-Fox-037940	Fusarium oxysporum	42.24	9.00e-19	86.70
IUUC-Fso-038465	Fusarium solani	43.97	8.00e-19	86.70
IUUC-Ggr-040089	Gaeumannomyces graminis	39.66	2.00e-17	82.40
IUUC-Gga-040910	Gallus gallus	63.75	8.00e-57	212.00
IUUC-Gma-044349	Glycine max	41.32	4.00e-19	87.40
IUUC-Ggo-044854	Gorilla gorilla	70.19	7.00e-67	246.00
IUUC-Hsa-046921	Homo sapiens	69.23	3.00e-65	240.00
IUUC-Hvu-047142	Hordeum vulgare	38.93	4.00e-20	91.30
IUUC-Kpa-049187	Komagataella pastoris	35.40	2.00e-11	61.60
IUUC-Lch-050614	Latimeria chalumnae	68.70	5.00e-50	190.00
IUUC-Lpe-051184	Leersia perrieri	36.64	3.00e-19	87.80
IUUC-Loc-052083	Lepisosteus oculatus	62.18	4.00e-42	162.00
IUUC-Lma-053209	Leptosphaeria maculans	34.82	1.00e-11	62.40
IUUC-Laf-054090	Loxodonta africana	67.31	8.00e-75	272.00
IUUC-Meu-056814	Macropus eugenii	67.33	7.00e-58	215.00
IUUC-Mor-057169	Magnaporthe oryzae	42.74	2.00e-18	85.50
IUUC-Mpo-057483	Magnaporthe poae	41.38	3.00e-18	84.70
IUUC-Mtr-058166	Medicago truncatula	43.93	3.00e-14	71.20
IUUC-Mla-059015	Melampsora laricipopulina	39.81	7.00e-16	76.30
IUUC-Mvi-060356	Microbotryum violaceum	45.45	8.00e-16	76.60
IUUC-Mdo-062658	Monodelphis domestica	72.00	4.00e-60	224.00
IUUC-Mmu-063470	Mus musculus	87.02	2.00e-101	360.00
IUUC-Mac-065327	Musa acuminata	41.13	8.00e-20	90.10
IUUC-Mpu-065761	Mustela putorius furo	76.47	6.00e-61	226.00
IUUC-Mlu-067175	Myotis lucifugus	64.84	9.00e-72	262.00
IUUC-Nfi-068535	Neosartorya fischeri	34.09	1.00e-14	72.80
IUUC-Ncr-068966	Neurospora crassa	33.55	8.00e-18	83.60
IUUC-Opr-070533	Ochotona princeps	51.32	2.00e-27	114.00
IUUC-Oan-073024	Ornithorhynchus anatinus	72.19	2.00e-53	201.00
IUUC-Ocu-074451	Oryctolagus cuniculus	69.15	3.00e-60	224.00
IUUC-Oba-075540	Oryza barthii	41.38	2.00e-19	89.00
IUUC-Obr-076285	Oryza brachyantha	35.37	1.00e-19	90.10
IUUC-Ogl-077827	Oryza glaberrima	41.38	2.00e-19	89.00
IUUC-Ogu-078491	Oryza glumaepatula	41.38	1.00e-19	89.40
IUUC-Oin-080149	Oryza indica	41.38	2.00e-19	89.00
IUUC-Olo-080318	Oryza longistaminata	39.34	3.00e-17	80.50
IUUC-Oni-083037	Oryza nivara	41.38	2.00e-19	89.00
IUUC-Opu-083448	Oryza punctata	39.84	9.00e-20	89.70
IUUC-Oru-084793	Oryza rufipogon	42.24	6.00e-20	90.50
IUUC-Osa-086032	Oryza sativa	41.38	2.00e-19	89.00
IUUC-Ola-086956	Oryzias latipes	57.03	1.00e-37	149.00
IUUC-Olu-087806	Ostreococcus lucimarinus	37.00	1.00e-10	59.30
IUUC-Oga-089029	Otolemur garnettii	72.38	7.00e-74	269.00
IUUC-Oar-089471	Ovis aries	63.98	3.00e-66	244.00
IUUC-Pan-092091	Papio anubis	68.75	8.00e-77	279.00
IUUC-Psi-093193	Pelodiscus sinensis	70.39	4.00e-60	223.00
IUUC-Pma-094540	Petromyzon marinus	57.14	2.00e-37	147.00
IUUC-Pno-094873	Phaeosphaeria nodorum	29.69	5.00e-14	70.90
IUUC-Ppa-095343	Physcomitrella patens	39.77	8.00e-13	67.40
IUUC-Pfo-097093	Poecilia formosa	53.62	5.00e-39	154.00
IUUC-Pab-098781	Pongo abelii	83.54	9.00e-23	99.00
IUUC-Pop-098983	Populus trichocarpa	38.79	2.00e-16	78.60
IUUC-Pca-100872	Procavia capensis	62.56	5.00e-53	200.00
IUUC-Ppe-101711	Prunus persica	45.56	4.00e-15	74.30
IUUC-Pva-102256	Pteropus vampyrus	68.25	2.00e-73	267.00
IUUC-Pgr-103607	Puccinia graminis	38.71	5.00e-17	80.90
IUUC-Pte-104220	Pyrenophora teres	31.93	2.00e-11	61.20
IUUC-Pyt-104562	Pyrenophora triticirepentis	31.93	7.00e-12	63.50
IUUC-Sce-106182	Saccharomyces cerevisiae	38.89	2.00e-11	62.00
IUUC-Sha-107279	Sarcophilus harrisii	71.33	1.00e-59	223.00
IUUC-Sja-107819	Schizosaccharomyces japonicus	34.13	7.00e-16	76.30
IUUC-Spo-108197	Schizosaccharomyces pombe	38.60	2.00e-17	82.00
IUUC-Smo-108810	Selaginella moellendorffii	45.24	5.00e-16	75.90
IUUC-Sit-110256	Setaria italica	37.40	1.00e-19	89.70
IUUC-Sly-111448	Solanum lycopersicum	39.66	1.00e-16	79.30
IUUC-Stu-112702	Solanum tuberosum	39.66	7.00e-17	80.10
IUUC-Sbi-113956	Sorghum bicolor	40.87	7.00e-20	90.10
IUUC-Sre-115024	Sporisorium reilianum	31.62	3.00e-12	65.10
IUUC-Ssc-116034	Sus scrofa	69.67	1.00e-75	275.00
IUUC-Tgu-117503	Taeniopygia guttata	69.01	3.00e-50	190.00
IUUC-Tsy-119166	Tarsius syrichta	65.58	1.00e-43	168.00
IUUC-Tni-120703	Tetraodon nigroviridis	46.32	7.00e-27	113.00
IUUC-Tca-121473	Theobroma cacao	43.33	3.00e-14	71.20
IUUC-Tre-122241	Trichoderma reesei	38.79	4.00e-16	76.60
IUUC-Tvi-122347	Trichoderma virens	36.21	2.00e-14	71.60
IUUC-Tae-124560	Triticum aestivum	37.50	3.00e-18	84.70
IUUC-Tur-126452	Triticum urartu	40.35	3.00e-19	87.80
IUUC-Tme-127205	Tuber melanosporum	43.75	3.00e-16	76.60
IUUC-Ttr-128186	Tursiops truncatus	67.02	1.00e-64	238.00
IUUC-Uma-129523	Ustilago maydis	28.68	2.00e-10	58.90
IUUC-Vda-129793	Verticillium dahliae	38.79	8.00e-17	80.10
IUUC-Vpa-130040	Vicugna pacos	77.92	1.00e-66	244.00
IUUC-Vvi-131588	Vitis vinifera	35.07	1.00e-15	75.90
IUUC-Yli-134631	Yarrowia lipolytica	38.04	1.00e-13	69.30
IUUC-Zma-135478	Zea mays	40.65	4.00e-20	91.30

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence