iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ssc-115385

Ensembl Protein ID

ENSSSCP00000023668.1

UniProt Accession

I3LHX0; I3LHX0_PIG

Genbank Protein ID

ENSSSCP00000023668

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

FP325221

Gene Name

TSSC1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000028755.1	ENSSSCT00000030705.1	ENSSSCP00000023668.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.40e-15	57.1	227	259

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd..tllvsGsdDgtikvWDlr 31
           H   v++l+f ++    l+s++dD+ +k WD+r
   Q: 227  HGQLVRDLDFnPNkqYCLASCGDDCRVKFWDTR 259
           8999******96654449*************87 PP

Organism

Sus scrofa

Protein Sequence
(Fasta)

MEDDAPVIYG LEFQARALTP QTAETDAIRF LVGTQSLKYD NQIHIIDFDD ENNIINKNVL 60
LHRAGEIWHI SASPADKGVL ATCYNKTADS KVLTCAAVWR MPAELEPGGH ESPEDAASPA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACAGTGATGA CGAAAAAGAA AGGCGCCGGA AGTGAGCCCT ACCGAAGCCG GACTGGGCTA 60
TAAAGATTTT CCGGTTAGAC GCCGCCTGGG CTGAGGGAAT GAATGGATAG TGAGCTGTGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

ssc:100626341

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001118	Aegilops tauschii	34.27	6.00e-36	144.00
IUUC-Aml-002348	Ailuropoda melanoleuca	90.73	1.00e-126	444.00
IUUC-Atr-003028	Amborella trichopoda	34.24	2.00e-49	188.00
IUUC-Apl-004211	Anas platyrhynchos	77.11	2.00e-170	591.00
IUUC-Aca-004893	Anolis carolinensis	85.79	0.00e+00	633.00
IUUC-Aly-006294	Arabidopsis lyrata	33.33	6.00e-51	194.00
IUUC-Ath-006902	Arabidopsis thaliana	33.86	3.00e-51	194.00
IUUC-Ame-010619	Astyanax mexicanus	83.72	0.00e+00	638.00
IUUC-Bta-013035	Bos taurus	92.51	0.00e+00	716.00
IUUC-Bdi-014619	Brachypodium distachyon	33.95	1.00e-49	190.00
IUUC-Bol-016581	Brassica oleracea	33.42	3.00e-51	195.00
IUUC-Bra-017885	Brassica rapa	33.60	4.00e-52	198.00
IUUC-Cel-018344	Caenorhabditis elegans	33.68	3.00e-52	198.00
IUUC-Cja-018975	Callithrix jacchus	80.92	0.00e+00	643.00
IUUC-Cfa-020214	Canis familiaris	89.92	0.00e+00	665.00
IUUC-Cpo-021363	Cavia porcellus	86.30	2.00e-177	614.00
IUUC-Cre-022554	Chlamydomonas reinhardtii	27.15	8.00e-35	140.00
IUUC-Csa-023240	Chlorocebus sabaeus	87.86	0.00e+00	629.00
IUUC-Cho-024713	Choloepus hoffmanni	81.88	1.00e-167	582.00
IUUC-Cin-025678	Ciona intestinalis	48.20	4.00e-105	374.00
IUUC-Csv-026022	Ciona savignyi	47.44	4.00e-102	364.00
IUUC-Dre-027817	Danio rerio	82.69	0.00e+00	664.00
IUUC-Dno-030097	Dasypus novemcinctus	88.11	0.00e+00	631.00
IUUC-Dme-031866	Drosophila melanogaster	39.29	7.00e-73	267.00
IUUC-Ete-032575	Echinops telfairi	75.68	2.00e-125	441.00
IUUC-Eca-034323	Equus caballus	89.74	2.00e-139	487.00
IUUC-Eeu-035217	Erinaceus europaeus	68.99	1.00e-134	472.00
IUUC-Fca-035709	Felis catus	90.00	3.00e-165	573.00
IUUC-Fal-036989	Ficedula albicollis	84.75	0.00e+00	628.00
IUUC-Gmo-038623	Gadus morhua	71.39	2.00e-152	531.00
IUUC-Gga-040157	Gallus gallus	84.75	4.00e-178	616.00
IUUC-Gac-041368	Gasterosteus aculeatus	60.61	1.00e-105	376.00
IUUC-Gma-044196	Glycine max	32.70	2.00e-49	189.00
IUUC-Ggo-044513	Gorilla gorilla	82.28	1.00e-177	615.00
IUUC-Hsa-046844	Homo sapiens	81.88	2.00e-177	614.00
IUUC-Hvu-047435	Hordeum vulgare	34.30	6.00e-50	191.00
IUUC-Itr-048726	Ictidomys tridecemlineatus	83.62	6.00e-134	469.00
IUUC-Lch-049696	Latimeria chalumnae	83.72	1.00e-178	618.00
IUUC-Lpe-050988	Leersia perrieri	33.94	4.00e-37	147.00
IUUC-Loc-052440	Lepisosteus oculatus	83.25	3.00e-178	617.00
IUUC-Laf-054088	Loxodonta africana	87.86	4.00e-180	623.00
IUUC-Mcc-055575	Macaca mulatta	81.55	3.00e-169	587.00
IUUC-Meu-056807	Macropus eugenii	64.01	2.00e-127	448.00
IUUC-Mtr-058599	Medicago truncatula	32.16	7.00e-49	187.00
IUUC-Mga-059336	Meleagris gallopavo	82.17	1.00e-170	592.00
IUUC-Mmr-061706	Microcebus murinus	86.82	2.00e-178	618.00
IUUC-Mdo-062736	Monodelphis domestica	86.56	5.00e-176	609.00
IUUC-Mmu-064265	Mus musculus	86.05	0.00e+00	640.00
IUUC-Mac-065342	Musa acuminata	32.80	2.00e-49	189.00
IUUC-Mpu-066514	Mustela putorius furo	89.66	0.00e+00	699.00
IUUC-Mlu-067072	Myotis lucifugus	90.36	3.00e-109	386.00
IUUC-Nle-069307	Nomascus leucogenys	78.99	7.00e-167	579.00
IUUC-Opr-070283	Ochotona princeps	69.77	1.00e-137	482.00
IUUC-Ont-072532	Oreochromis niloticus	80.88	1.00e-171	595.00
IUUC-Oan-073222	Ornithorhynchus anatinus	83.48	4.00e-167	580.00
IUUC-Oba-075849	Oryza barthii	33.33	5.00e-38	151.00
IUUC-Obr-076488	Oryza brachyantha	31.79	8.00e-43	167.00
IUUC-Ogl-077928	Oryza glaberrima	33.67	1.00e-40	159.00
IUUC-Ogu-077997	Oryza glumaepatula	33.33	5.00e-38	151.00
IUUC-Oin-079848	Oryza indica	33.67	4.00e-40	158.00
IUUC-Oni-082492	Oryza nivara	33.33	5.00e-38	151.00
IUUC-Oru-085119	Oryza rufipogon	33.33	5.00e-38	151.00
IUUC-Osa-086152	Oryza sativa	33.67	1.00e-40	159.00
IUUC-Ola-086694	Oryzias latipes	72.32	2.00e-169	588.00
IUUC-Olu-087749	Ostreococcus lucimarinus	35.78	2.00e-28	118.00
IUUC-Oga-088180	Otolemur garnettii	85.33	5.00e-134	469.00
IUUC-Oar-089621	Ovis aries	73.33	2.00e-137	481.00
IUUC-Ptr-091053	Pan troglodytes	83.20	7.00e-176	609.00
IUUC-Pan-091918	Papio anubis	87.34	0.00e+00	625.00
IUUC-Psi-093545	Pelodiscus sinensis	85.01	2.00e-179	620.00
IUUC-Pma-094439	Petromyzon marinus	72.01	3.00e-156	544.00
IUUC-Pfo-096127	Poecilia formosa	80.88	3.00e-178	617.00
IUUC-Pab-097916	Pongo abelii	78.74	1.00e-173	602.00
IUUC-Pop-098864	Populus trichocarpa	32.80	3.00e-48	185.00
IUUC-Pca-100797	Procavia capensis	77.27	2.00e-108	385.00
IUUC-Ppe-101796	Prunus persica	33.77	1.00e-53	202.00
IUUC-Pva-103228	Pteropus vampyrus	84.30	0.00e+00	649.00
IUUC-Rno-104877	Rattus norvegicus	86.30	0.00e+00	631.00
IUUC-Sha-106940	Sarcophilus harrisii	84.54	2.00e-180	624.00
IUUC-Smo-109355	Selaginella moellendorffii	33.33	1.00e-55	209.00
IUUC-Sit-109958	Setaria italica	33.60	6.00e-49	187.00
IUUC-Sly-111871	Solanum lycopersicum	33.24	8.00e-50	190.00
IUUC-Stu-112128	Solanum tuberosum	32.25	3.00e-46	178.00
IUUC-Sar-113084	Sorex araneus	73.86	1.00e-110	392.00
IUUC-Sbi-114122	Sorghum bicolor	33.25	3.00e-48	185.00
IUUC-Tgu-117090	Taeniopygia guttata	81.77	5.00e-168	583.00
IUUC-Tru-118548	Takifugu rubripes	71.36	7.00e-164	569.00
IUUC-Tsy-119435	Tarsius syrichta	81.64	5.00e-170	590.00
IUUC-Tni-120311	Tetraodon nigroviridis	69.41	5.00e-143	500.00
IUUC-Tca-121141	Theobroma cacao	33.16	5.00e-49	187.00
IUUC-Tae-122717	Triticum aestivum	34.04	1.00e-49	189.00
IUUC-Tbe-127623	Tupaia belangeri	62.73	2.00e-106	378.00
IUUC-Ttr-128706	Tursiops truncatus	80.36	2.00e-160	558.00
IUUC-Vvi-130871	Vitis vinifera	32.89	3.00e-47	181.00
IUUC-Xtr-131950	Xenopus tropicalis	81.91	0.00e+00	627.00
IUUC-Xma-133364	Xiphophorus maculatus	80.10	4.00e-176	610.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence