iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ssc-115641

Ensembl Protein ID

ENSSSCP00000023119.1

UniProt Accession

I3LGC6; I3LGC6_PIG

Genbank Protein ID

ENSSSCP00000023119

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

FP565775

Gene Name

USP24

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000029633.1	ENSSSCT00000024705.1	ENSSSCP00000023119.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	3.40e-79	266.7	1509	1861

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgy 87
           +Gl+N g+tCYmN+v Q+L++ p l e ll+     ++++  ++p+ ++  ++q+lf +l++sk +++ p++++k++k++++e+   
   Q: 1509 VGLRNGGATCYMNAVFQQLYMQPGLPESLLS-----VDDD-TDNPDDSVFYQVQSLFGHLMESKLQYYVPENFWKIFKMWNKELYVR 1589
           6******************************.....5444.468999**************************************** PP
   S: 88   eqqDaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlsl 174
           eqqDa Ef++ l+dq++e+l                          kk+  +++ +++Fqg +++q +c++c ++++ree f+ l+l
   Q: 1590 EQQDAYEFFTSLIDQMDEYL--------------------------KKMGRDQIFKNTFQGIYSDQKICKDCPHRYEREEAFMALNL 1650
           ********************..........................78999************************************ PP
   S: 175  pvpgkeetkkeslqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdl 261
            v + +     sl+ +L++f++ e leg+n+yycekck+k+ ++k++ +k+lP vL++hL+Rf f+ e ++++k ++++ fp +L++
   Q: 1651 GVTSCQ-----SLEISLDQFVRGEVLEGSNAYYCEKCKEKRITVKRTCIKSLPSVLVIHLMRFGFDWESGRSIKYDEQIRFPWMLNM 1732
           ******.....9*************************************************************************** PP
   S: 262  spfcts.....peekqke.........................kkkYeLiavvvHsGslssGHYvayvkn....ekgkWllfdDskV 314
           +p+++s     +     +                         +++YeL++vvvHsG+++ GHY++++k+     kgkW++f+D+ +
   Q: 1733 EPYTVSgmarqD-----SssevgengrstdqggggsprkkvalTENYELVGVVVHSGQAHAGHYYSFIKDrrgcGKGKWYKFNDTVI 1814
           ******666550.....34445555555666666666666666***************************55555666********* PP
   S: 315  tevk.eeevleetg.......................staYvlfYkr 337
           +e +  +e le +                        ++aY+lfY+r
   Q: 1815 EEFDlNDETLEYECfggeyrpkvydqtnpytdvrrryWNAYMLFYQR 1861
           ***844666664449******************************98 PP

Organism

Sus scrofa

Protein Sequence
(Fasta)

LLTSSAVHKW GTEIHEGIYN MLMLLIELVA ERIKQDPIPT GLLAVLTMAF NPDNEYHFKN 60
RMKVSQRNWA EVFGEGNMFA VSPVSTFQKE PHGWVVDLVN KFGELGGFAA IQAKLHSEDI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTCTGACAT CAAGCGCTGT TCACAAGTGG GGAACTGAAA TTCATGAAGG GATCTACAAC 60
ATGTTGATGC TGTTAATAGA ACTGGTTGCA GAGAGAATAA AACAAGACCC AATTCCCACT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR001394--Peptidase_C19_UCH
IPR029071--Ubiquitin-rel_dom
IPR033382--USP24
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF00443--UCH

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002266	Ailuropoda melanoleuca	97.34	0.00e+00	4606.00
IUUC-Apl-003203	Anas platyrhynchos	72.75	0.00e+00	3323.00
IUUC-Aca-004396	Anolis carolinensis	90.33	0.00e+00	4234.00
IUUC-Ame-011886	Astyanax mexicanus	84.62	0.00e+00	1771.00
IUUC-Bta-013381	Bos taurus	97.34	0.00e+00	4586.00
IUUC-Cel-018352	Caenorhabditis elegans	30.13	7.00e-62	233.00
IUUC-Cja-018955	Callithrix jacchus	96.58	0.00e+00	4375.00
IUUC-Cfa-020720	Canis familiaris	97.50	0.00e+00	4629.00
IUUC-Cpo-022430	Cavia porcellus	93.47	0.00e+00	3385.00
IUUC-Csa-024180	Chlorocebus sabaeus	97.13	0.00e+00	4573.00
IUUC-Cho-025074	Choloepus hoffmanni	92.64	0.00e+00	1849.00
IUUC-Dre-027696	Danio rerio	80.71	0.00e+00	3847.00
IUUC-Dno-029307	Dasypus novemcinctus	95.06	0.00e+00	4449.00
IUUC-Dor-030889	Dipodomys ordii	94.67	0.00e+00	4444.00
IUUC-Ete-032294	Echinops telfairi	94.25	0.00e+00	1964.00
IUUC-Eca-033823	Equus caballus	91.44	0.00e+00	4306.00
IUUC-Eeu-035178	Erinaceus europaeus	85.30	0.00e+00	1914.00
IUUC-Fca-035444	Felis catus	97.21	0.00e+00	4563.00
IUUC-Fal-037555	Ficedula albicollis	91.89	0.00e+00	4305.00
IUUC-Gmo-038587	Gadus morhua	79.47	0.00e+00	2469.00
IUUC-Gga-041231	Gallus gallus	91.76	0.00e+00	4316.00
IUUC-Gac-041584	Gasterosteus aculeatus	79.41	0.00e+00	2438.00
IUUC-Ggo-044502	Gorilla gorilla	97.21	0.00e+00	4572.00
IUUC-Hsa-045851	Homo sapiens	97.25	0.00e+00	4573.00
IUUC-Itr-048746	Ictidomys tridecemlineatus	98.19	0.00e+00	1583.00
IUUC-Lch-049999	Latimeria chalumnae	79.07	0.00e+00	3628.00
IUUC-Loc-051767	Lepisosteus oculatus	82.79	0.00e+00	3845.00
IUUC-Laf-054139	Loxodonta africana	96.52	0.00e+00	4552.00
IUUC-Mcc-055217	Macaca mulatta	97.09	0.00e+00	4567.00
IUUC-Meu-056659	Macropus eugenii	81.68	0.00e+00	2261.00
IUUC-Mga-059267	Meleagris gallopavo	91.89	0.00e+00	4341.00
IUUC-Mmr-060971	Microcebus murinus	95.74	0.00e+00	4522.00
IUUC-Mdo-061925	Monodelphis domestica	92.61	0.00e+00	4408.00
IUUC-Mmu-064019	Mus musculus	96.02	0.00e+00	4609.00
IUUC-Mpu-066652	Mustela putorius furo	97.91	0.00e+00	4617.00
IUUC-Mlu-067518	Myotis lucifugus	96.80	0.00e+00	4556.00
IUUC-Nle-069763	Nomascus leucogenys	96.93	0.00e+00	4551.00
IUUC-Opr-071031	Ochotona princeps	89.59	0.00e+00	4193.00
IUUC-Ont-072136	Oreochromis niloticus	78.58	0.00e+00	3714.00
IUUC-Oan-072908	Ornithorhynchus anatinus	81.04	0.00e+00	912.00
IUUC-Ocu-073880	Oryctolagus cuniculus	96.02	0.00e+00	4565.00
IUUC-Ola-086544	Oryzias latipes	77.49	0.00e+00	3565.00
IUUC-Oga-088695	Otolemur garnettii	96.68	0.00e+00	4602.00
IUUC-Oar-089401	Ovis aries	96.93	0.00e+00	4559.00
IUUC-Ptr-091657	Pan troglodytes	97.17	0.00e+00	4573.00
IUUC-Pan-092394	Papio anubis	97.13	0.00e+00	4568.00
IUUC-Psi-093813	Pelodiscus sinensis	92.22	0.00e+00	4325.00
IUUC-Pma-094698	Petromyzon marinus	53.33	5.00e-139	487.00
IUUC-Pfo-096811	Poecilia formosa	79.41	0.00e+00	3710.00
IUUC-Pab-097814	Pongo abelii	97.05	0.00e+00	4562.00
IUUC-Pca-101135	Procavia capensis	93.10	0.00e+00	2232.00
IUUC-Pva-102334	Pteropus vampyrus	95.36	0.00e+00	4358.00
IUUC-Rno-105040	Rattus norvegicus	95.90	0.00e+00	4560.00
IUUC-Sha-106658	Sarcophilus harrisii	93.12	0.00e+00	4445.00
IUUC-Sar-113153	Sorex araneus	85.22	0.00e+00	2541.00
IUUC-Tgu-117467	Taeniopygia guttata	92.12	0.00e+00	3269.00
IUUC-Tru-118074	Takifugu rubripes	71.83	0.00e+00	3306.00
IUUC-Tsy-119165	Tarsius syrichta	92.54	0.00e+00	4322.00
IUUC-Tni-119923	Tetraodon nigroviridis	67.87	0.00e+00	3070.00
IUUC-Tbe-127910	Tupaia belangeri	93.61	0.00e+00	1625.00
IUUC-Ttr-128218	Tursiops truncatus	96.89	0.00e+00	4578.00
IUUC-Vpa-130090	Vicugna pacos	98.99	0.00e+00	1567.00
IUUC-Xtr-131911	Xenopus tropicalis	84.54	0.00e+00	1675.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence