• HOME
  • BROWSE
  • SEARCH
  • LINK
  • DOWNLOAD
  • USER GUIDE
  • Protein
  • Gene
  • Annotation
  • Classification
  • Domain Profile
  • Function
  • Protein Sequence
  • Nucleotide Sequence
  • Keyword
  • GO
  • Orthology
  • TOP

Basic Information Integrated Annotations
Tag Content
UUCD2 ID IUUC-Ath-006612
UUCD1 version UUC-ArT-00158
Ensembl Protein ID AT2G46560.1
UniProt Accession F4IJ68; F4IJ68_ARATH
Genbank Protein ID AEC10721.1
Protein Name Transducin family protein / WD-40 repeat family protein
Genbank Nucleotide ID CP002685
Gene Name At2g46560; F13A10.9
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT2G46560 AT2G46560.1 AT2G46560.1
AT2G46560 AT2G46560.2 AT2G46560.2
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpress
DNA & RNA Element
TRANSFAC
Post-translational Modifications (PTMs)
dbPPT
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 1.90e-15 57.3 2416 2451
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWDlrtgvl 35
           H +svt +a    + l+++Gs Dg +k+WD +  +l
   Q: 2416 HLGSVTKIATipRTSLFLTGSKDGEVKLWDAKAAKL 2451
           999*****96664489**************766655 PP
   
Organism Arabidopsis thaliana
Protein Sequence
(Fasta)
MRYRIQLKPS GLERGSGDPR TDRIDHLPLR QLRSEIVPPA PTRSQSSIDW LPDFANYSWL 60
AYGASTLVVI SHLPSPLRGE DSTNGPFFRQ ILEVSGEPVT AVCWSPVTPS VGELAVGSGN 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Ath-006612|E3,WD_repeat|Arabidopsis thaliana
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGAGATATA GGATCCAGCT CAAACCTTCT GGCTTGGAAC GAGGGTCCGG TGATCCTCGT 60
ACTGGTAAGT TGTGTAGCAC AATCGGAAAA AAATAGTTGT GGTCTAAGAT TTGAGTTTTC 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Ath-006612|E3,WD_repeat|Arabidopsis thaliana
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat
Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR022033--Rav1p_C
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF12234--Rav1p_C
PF00400--WD40
SMART

SM00320--WD40
Gene Ontology

GO:0043291--C:RAVE complex
GO:0007035--P:vacuolar acidification
GO:0070072--P:vacuolar proton-transporting V-type ATPase complex assembly
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000362 Aegilops tauschii 59.01 2.00e-52 196.00
IUUC-Aml-001368 Ailuropoda melanoleuca 32.27 1.00e-34 142.00
IUUC-Atr-002754 Amborella trichopoda 55.56 0.00e+00 627.00
IUUC-Apl-003377 Anas platyrhynchos 32.29 3.00e-34 141.00
IUUC-Aca-004649 Anolis carolinensis 33.45 4.00e-36 147.00
IUUC-Aly-006404 Arabidopsis lyrata 89.46 0.00e+00 4369.00
IUUC-Afu-009077 Aspergillus fumigatus 34.50 8.00e-37 149.00
IUUC-Ani-009437 Aspergillus nidulans 26.20 3.00e-38 154.00
IUUC-Ang-009742 Aspergillus niger 28.02 4.00e-41 163.00
IUUC-Ame-010919 Astyanax mexicanus 29.40 2.00e-37 152.00
IUUC-Bta-013088 Bos taurus 33.07 7.00e-35 144.00
IUUC-Bdi-014471 Brachypodium distachyon 43.62 1.00e-169 589.00
IUUC-Bol-016375 Brassica oleracea 81.00 0.00e+00 3932.00
IUUC-Bra-016630 Brassica rapa 80.68 0.00e+00 3974.00
IUUC-Cel-018537 Caenorhabditis elegans 29.52 2.00e-24 109.00
IUUC-Cja-019137 Callithrix jacchus 33.05 2.00e-33 139.00
IUUC-Cfa-021215 Canis familiaris 31.87 4.00e-34 141.00
IUUC-Cpo-022333 Cavia porcellus 32.67 8.00e-35 143.00
IUUC-Csa-023972 Chlorocebus sabaeus 28.12 2.00e-34 142.00
IUUC-Cho-024762 Choloepus hoffmanni 28.32 1.00e-33 139.00
IUUC-Csv-026055 Ciona savignyi 33.99 5.00e-37 150.00
IUUC-Dre-028673 Danio rerio 28.28 2.00e-34 142.00
IUUC-Dno-029855 Dasypus novemcinctus 29.11 2.00e-26 115.00
IUUC-Dor-030381 Dipodomys ordii 32.77 2.00e-34 142.00
IUUC-Dme-031825 Drosophila melanogaster 36.22 2.00e-39 159.00
IUUC-Ete-033176 Echinops telfairi 33.19 3.00e-33 138.00
IUUC-Eca-033386 Equus caballus 32.64 2.00e-33 139.00
IUUC-Eeu-035011 Erinaceus europaeus 29.47 7.00e-32 134.00
IUUC-Fca-035735 Felis catus 29.97 4.00e-35 144.00
IUUC-Fal-037367 Ficedula albicollis 30.18 2.00e-35 145.00
IUUC-Gmo-038687 Gadus morhua 31.79 5.00e-35 144.00
IUUC-Gga-040693 Gallus gallus 30.03 1.00e-35 145.00
IUUC-Gac-041986 Gasterosteus aculeatus 30.23 2.00e-37 152.00
IUUC-Gma-044099 Glycine max 46.89 0.00e+00 2068.00
IUUC-Ggo-044811 Gorilla gorilla 31.69 5.00e-34 140.00
IUUC-Hsa-045950 Homo sapiens 31.69 6.00e-34 140.00
IUUC-Hvu-047213 Hordeum vulgare 65.12 4.00e-117 413.00
IUUC-Itr-047982 Ictidomys tridecemlineatus 24.67 1.00e-33 140.00
IUUC-Lch-050020 Latimeria chalumnae 29.91 2.00e-35 145.00
IUUC-Lpe-051382 Leersia perrieri 38.12 0.00e+00 1243.00
IUUC-Loc-052909 Lepisosteus oculatus 28.64 5.00e-39 157.00
IUUC-Laf-054195 Loxodonta africana 33.19 2.00e-34 142.00
IUUC-Mcc-055646 Macaca mulatta 31.34 9.00e-34 140.00
IUUC-Meu-056627 Macropus eugenii 29.46 1.00e-22 102.00
IUUC-Mtr-058725 Medicago truncatula 46.73 0.00e+00 2076.00
IUUC-Mga-059386 Meleagris gallopavo 28.32 2.00e-34 142.00
IUUC-Mmr-060784 Microcebus murinus 28.53 2.00e-35 145.00
IUUC-Mdo-062837 Monodelphis domestica 33.19 2.00e-28 122.00
IUUC-Mmu-063808 Mus musculus 31.13 5.00e-37 150.00
IUUC-Mac-065224 Musa acuminata 41.31 0.00e+00 1696.00
IUUC-Mpu-066054 Mustela putorius furo 28.12 5.00e-34 141.00
IUUC-Mlu-067458 Myotis lucifugus 33.33 2.00e-34 142.00
IUUC-Nfi-068420 Neosartorya fischeri 30.68 4.00e-36 146.00
IUUC-Nle-070123 Nomascus leucogenys 31.69 5.00e-34 140.00
IUUC-Opr-070543 Ochotona princeps 25.74 2.00e-18 89.00
IUUC-Ont-071658 Oreochromis niloticus 30.15 4.00e-38 154.00
IUUC-Oan-072796 Ornithorhynchus anatinus 28.85 3.00e-15 73.90
IUUC-Ocu-074711 Oryctolagus cuniculus 28.64 6.00e-34 140.00
IUUC-Oba-075826 Oryza barthii 37.15 0.00e+00 1461.00
IUUC-Obr-076145 Oryza brachyantha 36.90 0.00e+00 1441.00
IUUC-Ogu-078307 Oryza glumaepatula 36.93 0.00e+00 1478.00
IUUC-Oin-080118 Oryza indica 35.87 0.00e+00 862.00
IUUC-Olo-080848 Oryza longistaminata 46.94 9.00e-165 574.00
IUUC-Oni-082792 Oryza nivara 38.39 0.00e+00 1178.00
IUUC-Opu-084153 Oryza punctata 38.33 0.00e+00 1196.00
IUUC-Oru-084415 Oryza rufipogon 37.63 0.00e+00 1141.00
IUUC-Osa-085332 Oryza sativa 52.91 1.00e-174 605.00
IUUC-Ola-087560 Oryzias latipes 34.48 2.00e-32 135.00
IUUC-Oga-088816 Otolemur garnettii 30.11 4.00e-35 144.00
IUUC-Oar-089618 Ovis aries 33.07 9.00e-35 143.00
IUUC-Ptr-090937 Pan troglodytes 31.69 6.00e-34 140.00
IUUC-Pan-092151 Papio anubis 32.77 2.00e-33 139.00
IUUC-Psi-093590 Pelodiscus sinensis 31.23 3.00e-33 138.00
IUUC-Ppa-095505 Physcomitrella patens 45.38 1.00e-114 408.00
IUUC-Pfo-097445 Poecilia formosa 29.06 1.00e-37 153.00
IUUC-Pab-098237 Pongo abelii 32.67 7.00e-34 140.00
IUUC-Pop-098812 Populus trichocarpa 48.67 0.00e+00 2152.00
IUUC-Pca-101008 Procavia capensis 31.69 5.00e-34 140.00
IUUC-Ppe-101610 Prunus persica 49.63 0.00e+00 2286.00
IUUC-Pva-102348 Pteropus vampyrus 33.19 1.00e-33 139.00
IUUC-Rno-105076 Rattus norvegicus 31.13 2.00e-36 149.00
IUUC-Sha-106860 Sarcophilus harrisii 32.95 1.00e-33 139.00
IUUC-Sja-107657 Schizosaccharomyces japonicus 32.62 4.00e-28 120.00
IUUC-Smo-109444 Selaginella moellendorffii 51.30 3.00e-120 424.00
IUUC-Sit-109981 Setaria italica 41.21 0.00e+00 789.00
IUUC-Sly-110968 Solanum lycopersicum 43.99 0.00e+00 1911.00
IUUC-Stu-111939 Solanum tuberosum 71.59 1.00e-76 277.00
IUUC-Sar-113751 Sorex araneus 28.57 2.00e-20 96.30
IUUC-Sbi-113768 Sorghum bicolor 65.54 1.00e-65 241.00
IUUC-Ssc-116371 Sus scrofa 32.67 1.00e-34 143.00
IUUC-Tgu-117108 Taeniopygia guttata 32.41 5.00e-35 144.00
IUUC-Tru-117628 Takifugu rubripes 29.69 6.00e-38 154.00
IUUC-Tsy-119228 Tarsius syrichta 31.37 2.00e-33 139.00
IUUC-Tni-120709 Tetraodon nigroviridis 28.34 6.00e-37 150.00
IUUC-Tca-121789 Theobroma cacao 49.77 0.00e+00 2058.00
IUUC-Tae-125726 Triticum aestivum 38.18 0.00e+00 1459.00
IUUC-Tur-126437 Triticum urartu 40.56 2.00e-60 227.00
IUUC-Tbe-127760 Tupaia belangeri 28.31 3.00e-34 142.00
IUUC-Ttr-128991 Tursiops truncatus 31.56 5.00e-35 144.00
IUUC-Vpa-130309 Vicugna pacos 33.61 2.00e-34 142.00
IUUC-Vvi-131584 Vitis vinifera 44.65 0.00e+00 821.00
IUUC-Xtr-132638 Xenopus tropicalis 30.64 2.00e-34 142.00
IUUC-Xma-134109 Xiphophorus maculatus 28.25 2.00e-37 152.00
Created Date 25-Jun-2017

https://dev.news.makassarkota.go.id/public/pgsoft-demo/ https://jdih.sumbawabaratkab.go.id/lato/pg-soft-demo/ https://dev.news.makassarkota.go.id/public/slot-gacor/ http://pbb.tanahbumbukab.go.id/-/slot-gacor/ slot gacor https://siakad.unipra.ac.id/sass/slot-gacor-x500/ http://kpm.dinus.ac.id/assets/images/berita/slot/
Copyright © 2004-2017.The CUCKOO Workgroup. All Rights Reserved