iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099249

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000339

Gene Name

POPTRDRAFT_756767; POPTR_0003s06050g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0003s06050	POPTR_0003s06050.1	POPTR_0003s06050.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	59.38	1.10e-02	38.90	IUUC-Hsa-046495

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MWNRLPSELL ANIFSFLSPD SLARAKTACR YWRTCANSYP LSTAASMVRH HQAWFVALPT 60
RSRGLCCYLH NPNIDKWHVL SLDFQPHPTR PIASIGSLIL SRPTDSTTLQ LAISNPFTKE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTGGAACC GCCTCCCATC TGAACTCCTT GCTAACATCT TCTCCTTCCT CTCTCCGGAC 60
TCCTTGGCAC GTGCCAAGAC AGCATGCCGG TACTGGCGCA CTTGTGCCAA TTCATACCCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR013187--F-box-assoc_dom_typ3
IPR017451--F-box-assoc_interact_dom
IPR001810--F-box_dom
IPR015915--Kelch-typ_b-propeller

PROSITE

PS50181--FBOX

Pfam

PF12937--F-box-like
PF08268--FBA_3

SMART

SM00256--FBOX

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity
GO:0031146--P:SCF-dependent proteasomal ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0003s06050g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001877	Ailuropoda melanoleuca	59.38	5.00e-04	38.90
IUUC-Aca-004463	Anolis carolinensis	54.84	3.00e-04	39.70
IUUC-Cja-019596	Callithrix jacchus	59.38	5.00e-04	38.90
IUUC-Cfa-021277	Canis familiaris	59.38	5.00e-04	38.90
IUUC-Csa-023690	Chlorocebus sabaeus	59.38	5.00e-04	38.90
IUUC-Cho-024460	Choloepus hoffmanni	59.38	5.00e-04	38.90
IUUC-Cgl-026584	Colletotrichum gloeosporioides	38.89	5.20e-02	32.70
IUUC-Dno-029088	Dasypus novemcinctus	51.61	7.00e-04	38.50
IUUC-Dor-031137	Dipodomys ordii	62.50	3.00e-04	40.00
IUUC-Fal-036634	Ficedula albicollis	54.84	2.00e-04	39.70
IUUC-Gga-040605	Gallus gallus	62.50	3.00e-04	39.30
IUUC-Ggo-045512	Gorilla gorilla	59.38	5.00e-04	38.90
IUUC-Hsa-046495	Homo sapiens	59.38	5.00e-04	38.90
IUUC-Laf-053475	Loxodonta africana	54.84	2.00e-04	40.00
IUUC-Mcc-055139	Macaca mulatta	59.38	4.00e-04	38.90
IUUC-Meu-056055	Macropus eugenii	59.38	6.00e-04	38.50
IUUC-Mlu-067120	Myotis lucifugus	51.61	8.00e-04	38.10
IUUC-Nle-069732	Nomascus leucogenys	59.38	5.00e-04	38.90
IUUC-Oga-088461	Otolemur garnettii	59.38	5.00e-04	38.90
IUUC-Ptr-091577	Pan troglodytes	59.38	5.00e-04	38.90
IUUC-Pan-092148	Papio anubis	59.38	5.00e-04	38.90
IUUC-Pab-098714	Pongo abelii	59.38	5.00e-04	38.90
IUUC-Rno-105524	Rattus norvegicus	59.38	5.00e-04	38.90
IUUC-Sar-113735	Sorex araneus	59.38	5.00e-04	38.90
IUUC-Tgu-117400	Taeniopygia guttata	54.84	3.00e-04	39.70

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence