iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121633

Ensembl Protein ID

EOY32908

UniProt Accession

A0A061GU17; A0A061GU17_THECC

Genbank Protein ID

EOY32908.1

Protein Name

RING/U-box superfamily protein isoform 1

Genbank Nucleotide ID

CM001887

Gene Name

TCM_040934

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_040934	EOY32909	EOY32909
TCM_040934	EOY32908	EOY32908

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.10e-06	29.1	45	88

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl+ +  ++  lv +C H+++ +C+ +w       sk  +CP C+
   Q: 45   CAICLDKIvlQETALVKGCEHAYCVTCILRW----ATYSKMPTCPQCK 88
           ******998855588999*************....889999******6 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MTSVIKIDAE QIVNALPNLS LQDQKEMKNK GAVGEEGCEN HSGICAICLD KIVLQETALV 60
KGCEHAYCVT CILRWATYSK MPTCPQCKHP FEFLNVHRSL DGRINDYMFE ESVCLLLRAA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAAAAAGTT GAAATCAACA CCATGACTTC AGTCATCAAG ATAGACGCTG AGCAAATAGT 60
CAACGCTCTT CCCAATCTCT CCCTTCAAGA TCAGGTGCTC TTTCTTCTTC TTTCTTTCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002853	Amborella trichopoda	62.38	3.00e-55	207.00
IUUC-Aly-006143	Arabidopsis lyrata	55.29	2.00e-59	221.00
IUUC-Ath-007240	Arabidopsis thaliana	58.29	1.00e-59	221.00
IUUC-Bdi-014704	Brachypodium distachyon	64.42	6.00e-49	186.00
IUUC-Bol-015356	Brassica oleracea	57.44	7.00e-56	209.00
IUUC-Cpo-021419	Cavia porcellus	35.00	9.00e-08	52.40
IUUC-Cre-022875	Chlamydomonas reinhardtii	62.03	1.00e-26	110.00
IUUC-Csa-023947	Chlorocebus sabaeus	33.33	1.00e-07	52.00
IUUC-Cho-024396	Choloepus hoffmanni	34.92	2.00e-08	54.30
IUUC-Cme-027236	Cyanidioschyzon merolae	34.48	1.00e-07	48.90
IUUC-Dno-029714	Dasypus novemcinctus	38.00	2.00e-07	51.60
IUUC-Ggo-044786	Gorilla gorilla	35.48	8.00e-06	45.10
IUUC-Hsa-046200	Homo sapiens	28.45	2.00e-08	50.40
IUUC-Lpe-050939	Leersia perrieri	66.67	9.00e-67	245.00
IUUC-Oan-073333	Ornithorhynchus anatinus	32.73	4.00e-07	46.20
IUUC-Oba-075008	Oryza barthii	67.63	1.00e-65	242.00
IUUC-Obr-076867	Oryza brachyantha	68.27	5.00e-64	236.00
IUUC-Ogl-077681	Oryza glaberrima	68.12	2.00e-66	244.00
IUUC-Ogu-078356	Oryza glumaepatula	68.12	2.00e-66	244.00
IUUC-Oin-079949	Oryza indica	68.12	2.00e-66	244.00
IUUC-Olo-080990	Oryza longistaminata	67.63	2.00e-65	241.00
IUUC-Ome-081618	Oryza meridionalis	68.12	2.00e-66	244.00
IUUC-Oni-082491	Oryza nivara	68.12	2.00e-66	244.00
IUUC-Opu-083979	Oryza punctata	64.18	7.00e-61	226.00
IUUC-Osa-085324	Oryza sativa	68.12	2.00e-66	244.00
IUUC-Olu-087720	Ostreococcus lucimarinus	32.24	6.00e-15	73.90
IUUC-Ptr-091454	Pan troglodytes	35.48	8.00e-06	45.10
IUUC-Pan-092016	Papio anubis	33.33	1.00e-05	44.30
IUUC-Pab-098106	Pongo abelii	33.85	9.00e-06	45.10
IUUC-Pop-099205	Populus trichocarpa	66.38	1.00e-79	288.00
IUUC-Ppe-101850	Prunus persica	72.65	1.00e-77	281.00
IUUC-Ptt-103977	Puccinia triticina	42.65	3.00e-06	44.70
IUUC-Sit-110148	Setaria italica	67.28	2.00e-57	214.00
IUUC-Sly-110879	Solanum lycopersicum	66.53	6.00e-74	269.00
IUUC-Stu-112540	Solanum tuberosum	66.53	1.00e-74	271.00
IUUC-Sbi-114796	Sorghum bicolor	66.26	4.00e-49	187.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence