iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lch-050209

Ensembl Protein ID

ENSLACP00000005329.1

UniProt Accession

H3A6Q8; H3A6Q8_LATCH

Genbank Protein ID

ENSLACP00000005329

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AFYH01236978

Gene Name

SMU1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000004738.1	ENSLACT00000005376.1	ENSLACP00000005329.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.60e-24	85.2	347	383

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           gH++ v+   f +d ++++s+s Dgt+k+W+++t  +
   Q: 347  GHSSFVNEATFtQDgHYIISASSDGTVKIWNMKTTEC 383
           7999999999**888****************999877 PP

Organism

Latimeria chalumnae

Protein Sequence
(Fasta)

MSIEIESSDV IRLIMQYLKE NNLHRTLATL QEETTVSLNT VDSIESFVAD INSGHWDTVL 60
QAIQSLKLPD KTLIDLYEQV VLELIELREL GAARSLLRQT DPMIMLKQTQ PERYIHLENL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCCGCCCACT TCTGAGAGGC ACGCCATGAT CACGTGATAA GGGTGGAAAA CCATAGATAT 60
CTTCTAAGAC AGTTAGCTAT GATTGAAAAA AACAAACAAA CAACAAAAAC AAAACACCAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006595--CTLH_C
IPR020472--G-protein_beta_WD-40_rep
IPR006594--LisH
IPR002469--Peptidase_S9B_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00668--CTLH
SM00667--LisH
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000857	Aegilops tauschii	60.27	5.00e-49	186.00
IUUC-Aml-001330	Ailuropoda melanoleuca	92.02	0.00e+00	976.00
IUUC-Atr-002570	Amborella trichopoda	61.40	0.00e+00	657.00
IUUC-Apl-003826	Anas platyrhynchos	90.91	0.00e+00	932.00
IUUC-Aca-005183	Anolis carolinensis	91.28	0.00e+00	970.00
IUUC-Aly-005632	Arabidopsis lyrata	60.31	0.00e+00	656.00
IUUC-Ath-007219	Arabidopsis thaliana	60.31	0.00e+00	650.00
IUUC-Ame-011374	Astyanax mexicanus	90.08	0.00e+00	962.00
IUUC-Bta-012890	Bos taurus	92.02	0.00e+00	976.00
IUUC-Bdi-014061	Brachypodium distachyon	60.62	0.00e+00	662.00
IUUC-Bol-016332	Brassica oleracea	60.62	0.00e+00	659.00
IUUC-Bra-017612	Brassica rapa	60.51	0.00e+00	660.00
IUUC-Cel-018238	Caenorhabditis elegans	58.01	2.00e-176	612.00
IUUC-Cja-019336	Callithrix jacchus	92.02	0.00e+00	976.00
IUUC-Cfa-021108	Canis familiaris	91.83	0.00e+00	974.00
IUUC-Cpo-022052	Cavia porcellus	92.02	0.00e+00	976.00
IUUC-Cre-022595	Chlamydomonas reinhardtii	54.58	1.00e-167	582.00
IUUC-Csa-023488	Chlorocebus sabaeus	92.02	0.00e+00	976.00
IUUC-Cho-025010	Choloepus hoffmanni	82.10	0.00e+00	848.00
IUUC-Cin-025251	Ciona intestinalis	76.70	0.00e+00	825.00
IUUC-Csv-026092	Ciona savignyi	70.65	0.00e+00	754.00
IUUC-Dre-027382	Danio rerio	89.69	0.00e+00	952.00
IUUC-Dno-029007	Dasypus novemcinctus	91.83	0.00e+00	975.00
IUUC-Dor-030180	Dipodomys ordii	78.42	1.00e-175	609.00
IUUC-Dme-031762	Drosophila melanogaster	73.74	0.00e+00	800.00
IUUC-Ete-032933	Echinops telfairi	90.95	0.00e+00	798.00
IUUC-Eca-033864	Equus caballus	91.88	0.00e+00	957.00
IUUC-Eeu-034635	Erinaceus europaeus	87.71	0.00e+00	777.00
IUUC-Fca-036119	Felis catus	92.02	0.00e+00	976.00
IUUC-Fal-037396	Ficedula albicollis	91.40	0.00e+00	946.00
IUUC-Gmo-038962	Gadus morhua	87.94	0.00e+00	944.00
IUUC-Gga-040134	Gallus gallus	91.63	0.00e+00	973.00
IUUC-Gac-041630	Gasterosteus aculeatus	87.94	0.00e+00	938.00
IUUC-Gma-043928	Glycine max	61.21	0.00e+00	666.00
IUUC-Ggo-045061	Gorilla gorilla	92.04	0.00e+00	977.00
IUUC-Hsa-046215	Homo sapiens	92.02	0.00e+00	976.00
IUUC-Hvu-047799	Hordeum vulgare	61.22	2.00e-129	454.00
IUUC-Itr-048826	Ictidomys tridecemlineatus	92.02	0.00e+00	976.00
IUUC-Lpe-050740	Leersia perrieri	60.43	0.00e+00	659.00
IUUC-Loc-052739	Lepisosteus oculatus	82.69	0.00e+00	874.00
IUUC-Laf-053895	Loxodonta africana	91.84	0.00e+00	971.00
IUUC-Mcc-055183	Macaca mulatta	92.02	0.00e+00	976.00
IUUC-Mtr-057730	Medicago truncatula	60.62	0.00e+00	649.00
IUUC-Mga-059222	Meleagris gallopavo	90.21	0.00e+00	789.00
IUUC-Mmr-061749	Microcebus murinus	91.05	0.00e+00	961.00
IUUC-Mdo-062920	Monodelphis domestica	91.63	0.00e+00	974.00
IUUC-Mmu-063228	Mus musculus	92.02	0.00e+00	976.00
IUUC-Mac-065084	Musa acuminata	61.60	0.00e+00	672.00
IUUC-Mpu-066162	Mustela putorius furo	92.02	0.00e+00	976.00
IUUC-Mlu-067471	Myotis lucifugus	91.05	0.00e+00	967.00
IUUC-Nle-070129	Nomascus leucogenys	92.02	0.00e+00	976.00
IUUC-Opr-071176	Ochotona princeps	91.88	0.00e+00	957.00
IUUC-Ont-071830	Oreochromis niloticus	89.30	0.00e+00	953.00
IUUC-Oan-072778	Ornithorhynchus anatinus	91.63	0.00e+00	975.00
IUUC-Ocu-074570	Oryctolagus cuniculus	92.02	0.00e+00	976.00
IUUC-Oba-075507	Oryza barthii	60.43	0.00e+00	662.00
IUUC-Obr-076672	Oryza brachyantha	60.82	0.00e+00	667.00
IUUC-Ogl-077110	Oryza glaberrima	60.43	0.00e+00	662.00
IUUC-Ogu-077976	Oryza glumaepatula	60.43	0.00e+00	662.00
IUUC-Oin-079525	Oryza indica	60.43	0.00e+00	662.00
IUUC-Olo-080391	Oryza longistaminata	58.90	0.00e+00	652.00
IUUC-Oni-082778	Oryza nivara	60.43	0.00e+00	662.00
IUUC-Opu-083710	Oryza punctata	60.43	0.00e+00	662.00
IUUC-Oru-084250	Oryza rufipogon	60.43	0.00e+00	662.00
IUUC-Osa-085363	Oryza sativa	60.43	0.00e+00	662.00
IUUC-Ola-087092	Oryzias latipes	88.72	0.00e+00	947.00
IUUC-Olu-087753	Ostreococcus lucimarinus	47.00	4.00e-123	434.00
IUUC-Oga-088278	Otolemur garnettii	83.62	0.00e+00	862.00
IUUC-Oar-089664	Ovis aries	91.86	0.00e+00	977.00
IUUC-Ptr-090991	Pan troglodytes	92.02	0.00e+00	976.00
IUUC-Pan-092697	Papio anubis	92.02	0.00e+00	976.00
IUUC-Psi-093204	Pelodiscus sinensis	91.80	0.00e+00	949.00
IUUC-Ppa-095325	Physcomitrella patens	61.60	0.00e+00	670.00
IUUC-Pfo-096988	Poecilia formosa	88.91	0.00e+00	955.00
IUUC-Pab-098288	Pongo abelii	92.02	0.00e+00	976.00
IUUC-Pop-098787	Populus trichocarpa	61.28	0.00e+00	671.00
IUUC-Pca-100583	Procavia capensis	84.95	0.00e+00	861.00
IUUC-Ppe-101307	Prunus persica	60.43	0.00e+00	660.00
IUUC-Pva-102711	Pteropus vampyrus	92.02	0.00e+00	976.00
IUUC-Rno-105614	Rattus norvegicus	92.02	0.00e+00	976.00
IUUC-Sha-107017	Sarcophilus harrisii	91.83	0.00e+00	975.00
IUUC-Smo-109547	Selaginella moellendorffii	58.95	8.00e-176	609.00
IUUC-Sit-110278	Setaria italica	60.23	0.00e+00	639.00
IUUC-Sly-111777	Solanum lycopersicum	62.18	0.00e+00	670.00
IUUC-Stu-112293	Solanum tuberosum	61.99	0.00e+00	669.00
IUUC-Sar-112955	Sorex araneus	88.13	0.00e+00	933.00
IUUC-Sbi-114802	Sorghum bicolor	60.43	0.00e+00	636.00
IUUC-Ssc-116054	Sus scrofa	92.02	0.00e+00	976.00
IUUC-Tgu-116909	Taeniopygia guttata	90.45	0.00e+00	961.00
IUUC-Tru-118195	Takifugu rubripes	88.52	0.00e+00	949.00
IUUC-Tsy-119420	Tarsius syrichta	84.24	0.00e+00	872.00
IUUC-Tni-120416	Tetraodon nigroviridis	88.13	0.00e+00	943.00
IUUC-Tca-121653	Theobroma cacao	61.28	0.00e+00	644.00
IUUC-Tae-125609	Triticum aestivum	60.43	0.00e+00	662.00
IUUC-Tur-126197	Triticum urartu	60.22	3.00e-136	478.00
IUUC-Tbe-128009	Tupaia belangeri	89.44	0.00e+00	627.00
IUUC-Ttr-128719	Tursiops truncatus	83.66	0.00e+00	870.00
IUUC-Vpa-130579	Vicugna pacos	91.63	0.00e+00	967.00
IUUC-Vvi-131127	Vitis vinifera	61.99	0.00e+00	671.00
IUUC-Xtr-132950	Xenopus tropicalis	85.14	0.00e+00	893.00
IUUC-Xma-133537	Xiphophorus maculatus	88.91	0.00e+00	955.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence