iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ocu-073760

UUCD1 version

UUC-OrC-01030

Ensembl Protein ID

ENSOCUP00000001630.3

UniProt Accession

G1SGC9; G1SGC9_RABIT

Protein Name

Uncharacterized protein

Gene Name

USP40

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOCUG00000001884.3	ENSOCUT00000001890.3	ENSOCUP00000001630.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	4.40e-80	269.4	42	482

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkg....ellkslqklfeelwkskkkavsprellkalkkeaeefsg 86
           G++N+g tCY+NS+LQ+L+++pe+re+l++  +e+l   ++k++       +  +lq+lf++l+  +++a s+++l+++++++++e  +
   Q: 42   GIRNQGGTCYLNSLLQTLHFTPEFREALFSLGPEELGSLEDKDKPDakvrIIPLQLQRLFAQLLLLDQEAASTEDLTDSFGWTSNE--E 128
           9*****************************777777665543332234458899******************************98..* PP
   S: 87   yeqqDaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslp 175
           ++q+D+qE+ ++l+++le++l                            +++++lis+l++g + +qi+c+ec+n+s+++e+fldl+++
   Q: 129  MRQHDVQELNRILFSALETSL--------------------------VGTSGHDLISRLYHGAVVNQIVCKECKNTSEKQEDFLDLTVA 191
           *********************..........................789*************************************** PP
   S: 176  vpgkeetkkeslqdcL.esftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlsp 263
           v++ +      l+d+L +++++ee ++++n yyce+c+k+++a+k+ kl+klP++L++ L Rf+f+  ++ r k ++ ++fpl+++l+p
   Q: 192  VKNVS-----GLEDALwNMYVEEEVFDCDNLYYCETCDKLVKATKSAKLRKLPPFLTVSLLRFNFDFVKCERYKETSPYTFPLRINLKP 275
           *****.....9****************************************************************************** PP
   S: 264  fctspeekqkekkkYeLiavvvHsGslssGHYvayvkn................................................... 301
           fc+++e ++  +++Y+L++v++H+G++ +GHY++y+k+                                                   
   Q: 276  FCEQSELDDL-EYIYDLFSVIIHKGGCYGGHYHVYIKDidhlgnwqfqeekskpdmklkdlkneeeiddplmilkaillqeknnlipvd 363
           ****999987.9***************************************************************************** PP
   S: 302  ...............................................................................ekgk....Wl 307
                                                                                          +       W+
   Q: 364  qlgqklmkkigvswnkkyrkhhgplrkflqlhsqvfllssdestvtllkspplqagsetqrpdrhvfqtptaeapglndT--AscphWF 450
           *********************************************************99999999999999988887641..24567** PP
   S: 308  lfdDskVtevkeeevleetg..staYvlfYkr 337
            +dDs+V++++e++++++ +  ++aY+lfY++
   Q: 451  DIDDSRVQPIEEKDIEQQFQgkESAYMLFYRK 482
           *****************9889*********98 PP

Organism

Oryctolagus cuniculus

Protein Sequence
(Fasta)

MFGDLFEEDY SSVSNNQYGK GKKLKPKALE PPAPREFTNL SGIRNQGGTC YLNSLLQTLH 60
FTPEFREALF SLGPEELGSL EDKDKPDAKV RIIPLQLQRL FAQLLLLDQE AASTEDLTDS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCAGTACTTT AGTTTCACAA TGTTTGGGGA CCTATTTGAA GAGGATTATT CCAGTGTGTC 60
CAATAATCAG TATGGAAAAG GGAAGAAATT AAAGCCTAAA GCATTGGAGC CACCTGCTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF00443--UCH

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

ocu:100345891

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001216	Ailuropoda melanoleuca	81.52	0.00e+00	1891.00
IUUC-Apl-004105	Anas platyrhynchos	62.76	0.00e+00	1519.00
IUUC-Aca-004715	Anolis carolinensis	61.76	0.00e+00	1462.00
IUUC-Ame-011073	Astyanax mexicanus	47.70	0.00e+00	1030.00
IUUC-Bta-012487	Bos taurus	79.68	0.00e+00	1937.00
IUUC-Cja-018937	Callithrix jacchus	81.81	0.00e+00	2023.00
IUUC-Cfa-020645	Canis familiaris	75.32	0.00e+00	1203.00
IUUC-Cpo-022160	Cavia porcellus	77.87	0.00e+00	1904.00
IUUC-Csa-023078	Chlorocebus sabaeus	81.47	0.00e+00	2046.00
IUUC-Cho-025013	Choloepus hoffmanni	63.56	0.00e+00	786.00
IUUC-Csv-026193	Ciona savignyi	56.90	1.00e-60	225.00
IUUC-Dre-027416	Danio rerio	49.77	0.00e+00	1139.00
IUUC-Dno-029639	Dasypus novemcinctus	77.28	0.00e+00	1627.00
IUUC-Dor-030624	Dipodomys ordii	88.37	3.00e-149	522.00
IUUC-Ete-032626	Echinops telfairi	63.96	0.00e+00	752.00
IUUC-Eca-034208	Equus caballus	81.47	0.00e+00	2023.00
IUUC-Eeu-035340	Erinaceus europaeus	46.15	2.00e-91	331.00
IUUC-Fca-035886	Felis catus	73.85	0.00e+00	788.00
IUUC-Fal-036925	Ficedula albicollis	63.07	0.00e+00	1429.00
IUUC-Gmo-038597	Gadus morhua	45.13	0.00e+00	886.00
IUUC-Gga-041171	Gallus gallus	62.47	0.00e+00	1498.00
IUUC-Gac-041362	Gasterosteus aculeatus	46.50	0.00e+00	979.00
IUUC-Ggo-045069	Gorilla gorilla	80.27	0.00e+00	1844.00
IUUC-Hsa-046715	Homo sapiens	82.28	0.00e+00	2037.00
IUUC-Itr-049006	Ictidomys tridecemlineatus	79.02	0.00e+00	1922.00
IUUC-Lch-050182	Latimeria chalumnae	51.86	0.00e+00	1146.00
IUUC-Loc-052705	Lepisosteus oculatus	54.86	0.00e+00	1269.00
IUUC-Laf-054132	Loxodonta africana	79.22	0.00e+00	1967.00
IUUC-Mcc-055734	Macaca mulatta	81.80	0.00e+00	2050.00
IUUC-Meu-056135	Macropus eugenii	84.12	6.00e-112	399.00
IUUC-Mga-060092	Meleagris gallopavo	62.18	0.00e+00	1474.00
IUUC-Mmr-061546	Microcebus murinus	78.61	0.00e+00	1918.00
IUUC-Mdo-061935	Monodelphis domestica	61.02	0.00e+00	1477.00
IUUC-Mmu-063630	Mus musculus	76.72	0.00e+00	1880.00
IUUC-Mpu-066579	Mustela putorius furo	78.82	0.00e+00	1967.00
IUUC-Mlu-068034	Myotis lucifugus	80.44	0.00e+00	1921.00
IUUC-Nle-069082	Nomascus leucogenys	79.36	0.00e+00	1671.00
IUUC-Opr-070953	Ochotona princeps	76.41	0.00e+00	1053.00
IUUC-Ont-072435	Oreochromis niloticus	47.73	0.00e+00	1104.00
IUUC-Oan-073339	Ornithorhynchus anatinus	66.27	0.00e+00	1553.00
IUUC-Ola-087015	Oryzias latipes	46.50	0.00e+00	919.00
IUUC-Oga-088960	Otolemur garnettii	81.57	0.00e+00	2015.00
IUUC-Oar-089853	Ovis aries	80.13	0.00e+00	1971.00
IUUC-Ptr-091093	Pan troglodytes	81.96	0.00e+00	2030.00
IUUC-Pan-091962	Papio anubis	80.76	0.00e+00	2026.00
IUUC-Psi-093691	Pelodiscus sinensis	65.44	0.00e+00	1579.00
IUUC-Pma-094428	Petromyzon marinus	65.47	4.00e-93	334.00
IUUC-Pfo-096983	Poecilia formosa	48.37	0.00e+00	1024.00
IUUC-Pab-097860	Pongo abelii	80.89	0.00e+00	1871.00
IUUC-Pca-100514	Procavia capensis	75.73	0.00e+00	634.00
IUUC-Pva-102771	Pteropus vampyrus	80.09	0.00e+00	1830.00
IUUC-Rno-105405	Rattus norvegicus	75.89	0.00e+00	1835.00
IUUC-Sha-107376	Sarcophilus harrisii	62.93	0.00e+00	1444.00
IUUC-Ssc-115819	Sus scrofa	75.06	0.00e+00	1339.00
IUUC-Tgu-117262	Taeniopygia guttata	62.35	0.00e+00	1491.00
IUUC-Tru-117601	Takifugu rubripes	48.22	0.00e+00	1093.00
IUUC-Tsy-118996	Tarsius syrichta	69.95	0.00e+00	1540.00
IUUC-Tni-120682	Tetraodon nigroviridis	43.36	0.00e+00	873.00
IUUC-Tbe-127616	Tupaia belangeri	61.67	0.00e+00	1205.00
IUUC-Ttr-129075	Tursiops truncatus	77.31	0.00e+00	1805.00
IUUC-Vpa-130108	Vicugna pacos	79.91	0.00e+00	1751.00
IUUC-Xtr-132623	Xenopus tropicalis	53.27	0.00e+00	1202.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence