iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000016306.2	ENSSSCT00000017757.2	ENSSSCP00000017276.2
ENSSSCG00000016306.2	ENSSSCT00000017759.2	ENSSSCP00000017278.2
ENSSSCG00000016306.2	ENSSSCT00000017758.2	ENSSSCP00000017277.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	4.40e-21	75.7	29	240

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 257  leLdlspfctspeekqkekkkYeLiavvvHsGslssGHYvayvkn............................................ 301
           l+++l+pfc+++e ++  ++ Y+L++v++H+G++ +GHY++y+k+                                            
   Q: 29   LMINLKPFCEQSELDDL-EYMYDLFSVIIHKGGCYGGHYHVYIKDvdhlgnwqfqedksnpdvnledlqsekeiddplmilkaillqke 116
           5699*******999987.9********************************************************************** PP
   S: 302  ....................................................................................ekgk. 305
                                                                                               +    
   Q: 117  esnqipvdqlgqkllkkkgvswnkkyrkqygplrkflqlhsqmfqlssdertvsllkdrslqaesdfqrsdqktstsespglndR--Ps 203
           **************************************************************99999999988888877776440..25 PP
   S: 306  ...WllfdDskVtevkeeevleetg..staYvlfYkr 337
              W+ ++D kV+++ke++++++ +  ++aY+lfY++
   Q: 204  cphWFDINDAKVQPIKEKDIEQQFQgkESAYMLFYRK 240
           667*******************9889*********98 PP

Organism

Sus scrofa

Protein Sequence
(Fasta)

MRQHDVQELN RILFSALETS LVGTSGHDLM INLKPFCEQS ELDDLEYMYD LFSVIIHKGG 60
CYGGHYHVYI KDVDHLGNWQ FQEDKSNPDV NLEDLQSEKE IDDPLMILKA ILLQKEESNQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNTATGACA ACTTATACCA 60
CTGTGGAACT TGTGACAAGC TGGTTAAAGC AGCAAAGGTA AAGATAGGTC CTGCCTTTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS00973--USP_2
PS50235--USP_3

Pfam

PF00443--UCH

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001216	Ailuropoda melanoleuca	80.53	0.00e+00	1404.00
IUUC-Apl-004105	Anas platyrhynchos	58.31	0.00e+00	1016.00
IUUC-Aca-004715	Anolis carolinensis	56.47	0.00e+00	987.00
IUUC-Ame-011073	Astyanax mexicanus	39.23	6.00e-171	594.00
IUUC-Bta-012487	Bos taurus	83.10	0.00e+00	1460.00
IUUC-Cja-018937	Callithrix jacchus	78.86	0.00e+00	1405.00
IUUC-Cfa-020645	Canis familiaris	78.30	0.00e+00	1201.00
IUUC-Cpo-022160	Cavia porcellus	73.03	0.00e+00	1282.00
IUUC-Csa-023078	Chlorocebus sabaeus	78.60	0.00e+00	1414.00
IUUC-Cho-025013	Choloepus hoffmanni	63.56	0.00e+00	776.00
IUUC-Dre-027416	Danio rerio	41.77	0.00e+00	645.00
IUUC-Dno-029639	Dasypus novemcinctus	76.74	0.00e+00	1358.00
IUUC-Dor-030624	Dipodomys ordii	68.01	2.00e-125	443.00
IUUC-Ete-032626	Echinops telfairi	61.25	0.00e+00	695.00
IUUC-Eca-034208	Equus caballus	81.92	0.00e+00	1479.00
IUUC-Eeu-035340	Erinaceus europaeus	43.41	4.00e-81	296.00
IUUC-Fca-035886	Felis catus	76.47	0.00e+00	724.00
IUUC-Fal-036925	Ficedula albicollis	56.74	0.00e+00	974.00
IUUC-Gmo-038597	Gadus morhua	37.58	3.00e-151	529.00
IUUC-Gga-041171	Gallus gallus	57.53	0.00e+00	984.00
IUUC-Gac-041362	Gasterosteus aculeatus	38.20	1.00e-176	613.00
IUUC-Ggo-045069	Gorilla gorilla	77.97	0.00e+00	1363.00
IUUC-Hsa-046715	Homo sapiens	79.75	0.00e+00	1435.00
IUUC-Itr-049006	Ictidomys tridecemlineatus	74.80	0.00e+00	1313.00
IUUC-Lch-050182	Latimeria chalumnae	45.80	0.00e+00	675.00
IUUC-Loc-052705	Lepisosteus oculatus	47.43	0.00e+00	754.00
IUUC-Laf-054132	Loxodonta africana	76.80	0.00e+00	1387.00
IUUC-Mcc-055734	Macaca mulatta	79.06	0.00e+00	1418.00
IUUC-Meu-056135	Macropus eugenii	44.12	8.00e-103	368.00
IUUC-Mga-060092	Meleagris gallopavo	57.47	0.00e+00	971.00
IUUC-Mmr-061546	Microcebus murinus	78.11	0.00e+00	1373.00
IUUC-Mdo-061935	Monodelphis domestica	57.30	0.00e+00	983.00
IUUC-Mmu-063630	Mus musculus	73.65	0.00e+00	1321.00
IUUC-Mpu-066579	Mustela putorius furo	76.77	0.00e+00	1373.00
IUUC-Mlu-068034	Myotis lucifugus	81.49	0.00e+00	1440.00
IUUC-Nle-069082	Nomascus leucogenys	78.83	0.00e+00	1415.00
IUUC-Opr-070953	Ochotona princeps	68.15	0.00e+00	880.00
IUUC-Ont-072435	Oreochromis niloticus	39.74	0.00e+00	631.00
IUUC-Oan-073339	Ornithorhynchus anatinus	59.46	0.00e+00	1047.00
IUUC-Ocu-073760	Oryctolagus cuniculus	75.06	0.00e+00	1360.00
IUUC-Ola-087015	Oryzias latipes	37.90	3.00e-165	575.00
IUUC-Oga-088960	Otolemur garnettii	78.17	0.00e+00	1383.00
IUUC-Oar-089853	Ovis aries	83.26	0.00e+00	1459.00
IUUC-Ptr-091093	Pan troglodytes	79.41	0.00e+00	1428.00
IUUC-Pan-091962	Papio anubis	78.17	0.00e+00	1397.00
IUUC-Psi-093691	Pelodiscus sinensis	60.16	0.00e+00	1051.00
IUUC-Pfo-096983	Poecilia formosa	40.28	0.00e+00	647.00
IUUC-Pab-097860	Pongo abelii	79.06	0.00e+00	1405.00
IUUC-Pca-100514	Procavia capensis	63.73	3.00e-139	489.00
IUUC-Pva-102771	Pteropus vampyrus	80.00	0.00e+00	1403.00
IUUC-Rno-105405	Rattus norvegicus	72.28	0.00e+00	1274.00
IUUC-Sha-107376	Sarcophilus harrisii	58.70	0.00e+00	1017.00
IUUC-Tgu-117262	Taeniopygia guttata	55.97	0.00e+00	980.00
IUUC-Tru-117601	Takifugu rubripes	39.31	1.00e-175	610.00
IUUC-Tsy-118996	Tarsius syrichta	65.90	0.00e+00	1106.00
IUUC-Tni-120682	Tetraodon nigroviridis	40.00	6.00e-172	598.00
IUUC-Tbe-127616	Tupaia belangeri	61.65	0.00e+00	854.00
IUUC-Ttr-129075	Tursiops truncatus	81.01	0.00e+00	1450.00
IUUC-Vpa-130108	Vicugna pacos	81.92	0.00e+00	1464.00
IUUC-Xtr-132623	Xenopus tropicalis	46.51	0.00e+00	766.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence