iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017498

Ensembl Protein ID

Bra010743.1-P

UniProt Accession

M4D2P0; M4D2P0_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra010743	Bra010743.1	Bra010743.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.20e-21	76.9	55	89

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           Ht+ v+ ++f  d ++lvsGsdD ++ +WD++t +
   Q: 55   HTGCVNTVSFnADgDILVSGSDDRQVILWDWDTAT 89
           9**********666****************99875 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MSRRPSKRQR SSDHTVVRIW ERELGQLPNR SFSNRFSASE HLLNRLGLHK KLQEHTGCVN 60
TVSFNADGDI LVSGSDDRQV ILWDWDTATV KLSFDSGHCN NIFQAKFMPF SDDRSIVTSS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGTAGAC GGCCGAGCAA AAGACAGAGA AGCAGCGACC ATACCGTGGT GAGAATCTGG 60
GAAAGGGAGC TGGGTCAGCT GCCCAATCGT AGTTTCTCCA ATCGTTTCTC AGCCTCTGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Apl-003181	Anas platyrhynchos	34.27	5.00e-37	149.00
IUUC-Aly-005872	Arabidopsis lyrata	79.47	0.00e+00	645.00
IUUC-Ath-006619	Arabidopsis thaliana	80.86	0.00e+00	675.00
IUUC-Bol-015450	Brassica oleracea	91.89	0.00e+00	807.00
IUUC-Cho-024527	Choloepus hoffmanni	28.86	1.00e-27	118.00
IUUC-Dor-030879	Dipodomys ordii	28.22	3.00e-24	107.00
IUUC-Loc-052880	Lepisosteus oculatus	34.17	5.00e-37	149.00
IUUC-Mga-059697	Meleagris gallopavo	40.85	9.00e-33	134.00
IUUC-Oan-072748	Ornithorhynchus anatinus	35.34	4.00e-15	75.50
IUUC-Ola-086755	Oryzias latipes	36.02	2.00e-38	154.00
IUUC-Tgu-116760	Taeniopygia guttata	33.46	2.00e-37	150.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence