iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
microRNA	RAID2
Protein-protein Interaction
IID	iRefIndex	PINA	Mentha
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/SCF/SKP1	5.70e-26	90.5	111	158

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/SCF/SKP1

   S: 1    ksLLdltcktVadmikgktpeeiRktFnienDftpeEeakvReEnqWA 48
           ++LLd+tcktVa+mikgk+p+ iR tF i+nDf p Ee++vR+En+W+
   Q: 111  QGLLDVTCKTVANMIKGKSPQAIRDTFAIQNDFLPQEEEQVRKENEWC 158
           79*********************************************9 PP

Organism

Drosophila melanogaster

Protein Sequence
(Fasta)

MPIIRLESAD KEIFDTDQEI AKCSETIRIA IEDLGDESDN SVLPLPNVNS LILKKVLHWA 60
TYHKDDPVVT EEVENKEKRT DDISSWDADF LKVDQGTLFE LILAANYLNI QGLLDVTCKT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACGACGTTCT AGTTTTCTAA GAATCCGGGG AATTATTGGC AGCCAAGTTC TTTATTTAAC 60
AAACGCTCTG TTCTCAGGCG GCCGCCGCAC CAGTCCGGTT CAAGTTGAAG GCAAGGGAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR016897--SKP1
IPR001232--SKP1-like
IPR011333--SKP1/BTB/POZ
IPR016072--Skp1_comp_dimer
IPR016073--Skp1_comp_POZ

Pfam

PF01466--Skp1
PF03931--Skp1_POZ

SMART

SM00512--Skp1

Gene Ontology

GO:0019005--C:SCF ubiquitin ligase complex
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

dme:Dmel_CG8881

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Cho-024854	Choloepus hoffmanni	44.53	1.00e-17	80.90
IUUC-Eeu-034817	Erinaceus europaeus	85.11	3.00e-19	85.10
IUUC-Olo-080619	Oryza longistaminata	44.10	3.00e-31	127.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence