iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-098797

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000340

Gene Name

POPTRDRAFT_791108; POPTR_0004s12060g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0004s12060	POPTR_0004s12060.1	POPTR_0004s12060.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.60e-21	77.3	921	992

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlp.sGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceen 72
           e+p+efl+pI+ +lM+dPv+lp s+it+dr  I+++l s+++ +P++r++lt ++l+Pn++l++ i++++ ++
   Q: 921  EIPDEFLDPIQCTLMKDPVILPsSRITVDRPVIQRHLLSDNT-DPFNRSHLTVDMLIPNTELKARIKEFVRSQ 992
           69***************************************9.**************************9876 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MATTSNKPQR SLQEIEDIVL RRILSVSLAD SSDPRIFYLE MTAAEILSEG KDLKLTRDLI 60
ERVLIDRLSV QSPNAEPPFN YLLGCYRRAV DELKKIANMK DKNVKSELEL SIKQVKKLSV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCAACGA CCTCAAATAA ACCTCAGAGA TCTCTCCAAG AAATCGAGGA CATTGTCCTC 60
CGCAGAATCC TCTCAGTCTC CCTCGCCGAC TCCTCTGATC CTCGAATTTT CTACTTAGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR019474--Ub_conjug_fac_E4_core
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box
PF10408--Ufd2P_core

SMART

SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0000151--C:ubiquitin ligase complex
GO:0034450--F:ubiquitin-ubiquitin ligase activity
GO:0000209--P:protein polyubiquitination
GO:0030433--P:ubiquitin-dependent ERAD pathway

KEGG

pop:POPTR_0004s12060g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000585	Aegilops tauschii	66.22	0.00e+00	1062.00
IUUC-Aml-002396	Ailuropoda melanoleuca	29.98	7.00e-96	345.00
IUUC-Apl-003747	Anas platyrhynchos	30.16	2.00e-100	360.00
IUUC-Ago-007880	Ashbya gossypii	27.80	8.00e-86	311.00
IUUC-Ate-010300	Aspergillus terreus	27.86	4.00e-107	382.00
IUUC-Bgr-011995	Blumeria graminis	30.19	1.00e-109	390.00
IUUC-Bta-013056	Bos taurus	30.08	7.00e-96	345.00
IUUC-Cel-018606	Caenorhabditis elegans	25.33	5.00e-60	226.00
IUUC-Cja-018872	Callithrix jacchus	29.99	5.00e-96	345.00
IUUC-Cre-022726	Chlamydomonas reinhardtii	38.48	5.00e-62	231.00
IUUC-Cho-024614	Choloepus hoffmanni	37.56	1.00e-73	271.00
IUUC-Cme-027352	Cyanidioschyzon merolae	28.61	1.00e-96	347.00
IUUC-Dno-029282	Dasypus novemcinctus	29.74	9.00e-96	345.00
IUUC-Dse-031393	Dothistroma septosporum	26.33	2.00e-99	357.00
IUUC-Eca-033778	Equus caballus	29.71	2.00e-93	337.00
IUUC-Eeu-035315	Erinaceus europaeus	41.92	5.00e-33	136.00
IUUC-Fal-037638	Ficedula albicollis	30.35	4.00e-101	362.00
IUUC-Fox-037909	Fusarium oxysporum	29.34	1.00e-102	367.00
IUUC-Fso-038406	Fusarium solani	28.00	3.00e-94	340.00
IUUC-Gac-041910	Gasterosteus aculeatus	31.73	4.00e-100	359.00
IUUC-Hsa-046880	Homo sapiens	30.19	8.00e-99	355.00
IUUC-Hvu-047157	Hordeum vulgare	66.42	0.00e+00	1030.00
IUUC-Itr-048469	Ictidomys tridecemlineatus	37.10	5.00e-77	281.00
IUUC-Kpa-049211	Komagataella pastoris	34.16	2.00e-67	250.00
IUUC-Lma-053241	Leptosphaeria maculans	27.89	1.00e-103	370.00
IUUC-Laf-053646	Loxodonta africana	29.91	2.00e-95	344.00
IUUC-Mcc-055588	Macaca mulatta	29.98	2.00e-96	347.00
IUUC-Mvi-060343	Microbotryum violaceum	29.46	3.00e-117	416.00
IUUC-Mdo-062102	Monodelphis domestica	29.55	9.00e-99	354.00
IUUC-Mmu-063223	Mus musculus	30.29	1.00e-99	357.00
IUUC-Mlu-068018	Myotis lucifugus	30.16	1.00e-95	344.00
IUUC-Nle-069605	Nomascus leucogenys	29.60	3.00e-94	340.00
IUUC-Ocu-074910	Oryctolagus cuniculus	30.45	2.00e-99	357.00
IUUC-Oga-087969	Otolemur garnettii	32.21	9.00e-89	321.00
IUUC-Oar-090020	Ovis aries	31.78	6.00e-95	342.00
IUUC-Ptr-091589	Pan troglodytes	30.19	8.00e-99	355.00
IUUC-Psi-093013	Pelodiscus sinensis	29.65	3.00e-100	360.00
IUUC-Pma-094627	Petromyzon marinus	38.85	7.00e-80	290.00
IUUC-Pno-094840	Phaeosphaeria nodorum	28.33	4.00e-114	405.00
IUUC-Pca-100762	Procavia capensis	29.09	3.00e-76	279.00
IUUC-Pva-102459	Pteropus vampyrus	32.38	3.00e-93	337.00
IUUC-Pte-104084	Pyrenophora teres	26.61	3.00e-108	386.00
IUUC-Pyt-104484	Pyrenophora triticirepentis	27.45	7.00e-110	391.00
IUUC-Rno-105719	Rattus norvegicus	30.29	7.00e-99	355.00
IUUC-Sha-106760	Sarcophilus harrisii	30.05	8.00e-99	354.00
IUUC-Sja-107698	Schizosaccharomyces japonicus	29.82	1.00e-102	367.00
IUUC-Spo-108076	Schizosaccharomyces pombe	28.32	4.00e-96	345.00
IUUC-Ssl-108624	Sclerotinia sclerotiorum	28.05	4.00e-107	382.00
IUUC-Sit-109949	Setaria italica	62.02	0.00e+00	1147.00
IUUC-Stu-112372	Solanum tuberosum	76.45	0.00e+00	1579.00
IUUC-Sar-113131	Sorex araneus	34.58	2.00e-63	237.00
IUUC-Sbi-113828	Sorghum bicolor	63.85	0.00e+00	1188.00
IUUC-Tgu-117290	Taeniopygia guttata	29.76	1.00e-96	347.00
IUUC-Tsy-118926	Tarsius syrichta	29.99	2.00e-96	347.00
IUUC-Tvi-122345	Trichoderma virens	28.56	4.00e-99	356.00
IUUC-Tae-124607	Triticum aestivum	61.92	0.00e+00	1091.00
IUUC-Tur-126056	Triticum urartu	66.10	0.00e+00	1059.00
IUUC-Tbe-127533	Tupaia belangeri	32.25	2.00e-94	340.00
IUUC-Xtr-132364	Xenopus tropicalis	31.28	8.00e-98	352.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence