iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bta-013408

Ensembl Protein ID

ENSBTAP00000021729.4

UniProt Accession

F1N426; F1N426_BOVIN

Genbank Protein ID

ENSBTAP00000021729

Protein Name

DNA-binding protein SATB; Special AT-rich sequence-binding protein

Genbank Nucleotide ID

DAAA02005537

Gene Name

SATB2

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSBTAG00000016334.4	ENSBTAT00000021729.4	ENSBTAP00000021729.4

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UBQ/UBQ_Other	2.40e-06	27.5	94	180

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UBQ/UBQ_Other

   S: 1    vqvtvksldgs.eltlkvnpsd.tVaeLKeki.....ekk.lgip.peqqrLiykGki.L..eddktLady.glkdgstihllekksg 75
           v+++v++ldgs e++ + ++++ +V+++K+ +     e++ l ++ +++++ + +G+i L  +++ +L+++ +++d++++++l+++++
   Q: 94   VFCVVEQLDGSlEYDNR-EEHAeFVLVRKDVLfsqlvETAlLALGySHSSAAQAQGIIkLgrWNPLPLSYVtDAPDATVADMLQDVYH 180
           689************99.77777*******55555578888****************96599************************98 PP

Organism

Bos taurus

Protein Sequence
(Fasta)

PSFGFAVGHR VSGPCAFYCD LPVGTLSPSR SSMERRSESP CLRDSPDRRS GSPDVKGPPS 60
AKVARLEQNG SPMGARGRPN GAVAKAVGGL MIPVFCVVEQ LDGSLEYDNR EEHAEFVLVR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCAAGTTTTG GGTTTGCTGT GGGCCACCGA GTGTCAGGTT GGGTCCGGTT TCCCCGGCCA 60
ACCGATGTTC GGGCCCCTCG GGCAGCGTGG GAGGAAGTTT GGGTGGCTTT GGTGCGGCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0238--DNA-binding
KW-0371--Homeobox
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR003350--CUT_dom
IPR032355--CUTL
IPR009057--Homeobox-like
IPR001356--Homeobox_dom
IPR010982--Lambda_DNA-bd_dom
IPR032392--ULD

PROSITE

PS51042--CUT
PS50071--HOMEOBOX_2

Pfam

PF02376--CUT
PF16557--CUTL
PF00046--Homeobox
PF16534--ULD

SMART

SM01109--CUT
SM00389--HOX

Gene Ontology

GO:0000118--C:histone deacetylase complex
GO:0005634--C:nucleus
GO:0005667--C:transcription factor complex
GO:0003682--F:chromatin binding
GO:0000978--F:RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0043565--F:sequence-specific DNA binding
GO:0001077--F:transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding
GO:0051216--P:cartilage development
GO:0071310--P:cellular response to organic substance
GO:0006338--P:chromatin remodeling
GO:0021902--P:commitment of neuronal cell to specific neuron type in forebrain
GO:0009880--P:embryonic pattern specification
GO:0048704--P:embryonic skeletal system morphogenesis
GO:0000122--P:negative regulation of transcription from RNA polymerase II promoter
GO:0001764--P:neuron migration
GO:0002076--P:osteoblast development
GO:0060021--P:palate development
GO:0006357--P:regulation of transcription from RNA polymerase II promoter

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001646	Ailuropoda melanoleuca	97.77	0.00e+00	1209.00
IUUC-Apl-004052	Anas platyrhynchos	94.83	0.00e+00	1145.00
IUUC-Aca-004787	Anolis carolinensis	89.74	0.00e+00	1255.00
IUUC-Cja-019389	Callithrix jacchus	99.45	0.00e+00	1258.00
IUUC-Cfa-020265	Canis familiaris	98.69	0.00e+00	1234.00
IUUC-Cpo-022536	Cavia porcellus	93.89	0.00e+00	1040.00
IUUC-Csa-023562	Chlorocebus sabaeus	99.45	0.00e+00	1258.00
IUUC-Cho-024887	Choloepus hoffmanni	99.05	0.00e+00	1255.00
IUUC-Dno-029724	Dasypus novemcinctus	99.18	0.00e+00	1223.00
IUUC-Dor-030304	Dipodomys ordii	96.68	0.00e+00	719.00
IUUC-Ete-032494	Echinops telfairi	98.65	2.00e-126	446.00
IUUC-Eca-034263	Equus caballus	99.34	0.00e+00	1265.00
IUUC-Eeu-035070	Erinaceus europaeus	86.36	0.00e+00	1078.00
IUUC-Fca-035798	Felis catus	99.13	0.00e+00	1214.00
IUUC-Fal-037543	Ficedula albicollis	94.96	0.00e+00	1144.00
IUUC-Ggo-045271	Gorilla gorilla	99.45	0.00e+00	1259.00
IUUC-Hsa-046324	Homo sapiens	99.45	0.00e+00	1259.00
IUUC-Laf-053934	Loxodonta africana	99.18	0.00e+00	1257.00
IUUC-Mcc-054634	Macaca mulatta	99.59	0.00e+00	1260.00
IUUC-Meu-056505	Macropus eugenii	97.33	5.00e-132	464.00
IUUC-Mga-060057	Meleagris gallopavo	94.24	0.00e+00	1134.00
IUUC-Mmr-061381	Microcebus murinus	99.70	0.00e+00	1109.00
IUUC-Mdo-061840	Monodelphis domestica	97.54	0.00e+00	1279.00
IUUC-Mmu-064308	Mus musculus	99.32	0.00e+00	1259.00
IUUC-Mpu-066080	Mustela putorius furo	99.71	0.00e+00	1221.00
IUUC-Mlu-066936	Myotis lucifugus	96.38	0.00e+00	1226.00
IUUC-Nle-069956	Nomascus leucogenys	99.59	0.00e+00	1260.00
IUUC-Ocu-073904	Oryctolagus cuniculus	98.91	0.00e+00	1223.00
IUUC-Oga-088311	Otolemur garnettii	98.80	0.00e+00	1254.00
IUUC-Oar-089530	Ovis aries	99.72	0.00e+00	1231.00
IUUC-Ptr-090832	Pan troglodytes	99.45	0.00e+00	1259.00
IUUC-Pan-091847	Papio anubis	99.45	0.00e+00	1258.00
IUUC-Psi-093659	Pelodiscus sinensis	95.23	0.00e+00	1276.00
IUUC-Pab-098649	Pongo abelii	99.45	0.00e+00	1259.00
IUUC-Pca-100908	Procavia capensis	97.82	0.00e+00	1196.00
IUUC-Pva-102867	Pteropus vampyrus	99.56	0.00e+00	1221.00
IUUC-Rno-105849	Rattus norvegicus	98.91	0.00e+00	1262.00
IUUC-Sha-106557	Sarcophilus harrisii	97.14	0.00e+00	1294.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence