iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Yli-134580

Ensembl Protein ID

CAG78145

UniProt Accession

Q6C1X4; Q6C1X4_YARLI

Genbank Protein ID

CAG78145.1

Protein Name

YALI0F12661p

Genbank Nucleotide ID

CR382132

Gene Name

YALI0_F12661g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
YALI0_F12661g	CAG78145	CAG78145

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.50e-12	44.2	95	125

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    HtdsvtclafsdtllvsGsdDgtikvWDlrt 32
           H  s+ cla s+++lvsGs D +i+++Dl +
   Q: 95   HIQSIKCLATSGRYLVSGSADENIRIYDLQK 125
           7789999998669***************965 PP

Organism

Yarrowia lipolytica

Protein Sequence
(Fasta)

MSKITKPKSA LKGSKSDKKQ VKMAAEAVEK IVAEKPVEET PADLSKTIVS TSSSTSSVDP 60
AFRIVTGSYE HNLFCVSLLL GTSPVFSPIF HFTPHIQSIK CLATSGRYLV SGSADENIRI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGCAAAA TCACCAAGCC CAAGAGCGCC CTGAAGGGCT CCAAATCCGA CAAGAAGCAG 60
GTCAAGATGG CCGCGGAGGC CGTGGAGAAA ATTGTGGCCG AAAAGCCCGT CGAGGAGACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0016020--C:membrane
GO:0000466--P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000463--P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000027--P:ribosomal large subunit assembly

KEGG

yli:YALI0F12661g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001803	Ailuropoda melanoleuca	31.17	2.00e-34	137.00
IUUC-Atr-003018	Amborella trichopoda	27.97	3.00e-22	97.80
IUUC-Apl-004199	Anas platyrhynchos	38.33	7.00e-34	135.00
IUUC-Aca-005157	Anolis carolinensis	37.13	6.00e-32	129.00
IUUC-Aly-006245	Arabidopsis lyrata	27.65	4.00e-18	83.60
IUUC-Ath-007309	Arabidopsis thaliana	27.65	2.00e-18	84.30
IUUC-Ago-007878	Ashbya gossypii	39.66	7.00e-56	208.00
IUUC-Acl-008015	Aspergillus clavatus	27.08	2.00e-30	124.00
IUUC-Afl-008460	Aspergillus flavus	28.81	2.00e-24	104.00
IUUC-Afu-008760	Aspergillus fumigatus	29.83	2.00e-33	134.00
IUUC-Ani-009358	Aspergillus nidulans	28.33	2.00e-32	131.00
IUUC-Aor-010146	Aspergillus oryzae	28.81	2.00e-24	104.00
IUUC-Ate-010411	Aspergillus terreus	26.54	8.00e-28	116.00
IUUC-Ame-011121	Astyanax mexicanus	36.32	3.00e-34	136.00
IUUC-Bgr-012152	Blumeria graminis	26.93	2.00e-28	117.00
IUUC-Bta-012383	Bos taurus	29.13	3.00e-34	137.00
IUUC-Bci-013752	Botrytis cinerea	25.92	6.00e-28	116.00
IUUC-Bol-015330	Brassica oleracea	29.38	1.00e-18	85.10
IUUC-Bra-017790	Brassica rapa	28.91	2.00e-18	84.30
IUUC-Cja-018803	Callithrix jacchus	31.97	1.00e-34	138.00
IUUC-Cfa-020178	Canis familiaris	32.22	8.00e-35	139.00
IUUC-Cpo-021785	Cavia porcellus	31.44	1.00e-35	142.00
IUUC-Cre-022703	Chlamydomonas reinhardtii	30.90	4.00e-21	94.70
IUUC-Csa-023179	Chlorocebus sabaeus	30.29	3.00e-37	147.00
IUUC-Cho-025088	Choloepus hoffmanni	27.78	2.00e-20	91.30
IUUC-Csv-025887	Ciona savignyi	28.73	2.00e-25	107.00
IUUC-Cgl-026525	Colletotrichum gloeosporioides	26.37	8.00e-28	115.00
IUUC-Cne-027021	Cryptococcus neoformans	31.30	8.00e-33	134.00
IUUC-Dre-027360	Danio rerio	28.14	1.00e-34	138.00
IUUC-Dno-029836	Dasypus novemcinctus	30.27	2.00e-36	144.00
IUUC-Dor-030677	Dipodomys ordii	32.00	1.00e-35	141.00
IUUC-Dse-031177	Dothistroma septosporum	26.60	8.00e-22	96.30
IUUC-Dme-032004	Drosophila melanogaster	24.40	1.00e-18	85.50
IUUC-Ete-032837	Echinops telfairi	32.73	4.00e-36	142.00
IUUC-Eca-033291	Equus caballus	29.97	6.00e-38	149.00
IUUC-Eeu-035347	Erinaceus europaeus	31.75	5.00e-35	139.00
IUUC-Fca-036577	Felis catus	32.26	2.00e-35	140.00
IUUC-Fal-036810	Ficedula albicollis	36.27	4.00e-33	133.00
IUUC-Fox-037844	Fusarium oxysporum	27.27	4.00e-29	120.00
IUUC-Fso-038338	Fusarium solani	27.27	1.00e-29	122.00
IUUC-Gmo-038537	Gadus morhua	31.75	1.00e-34	138.00
IUUC-Ggr-039772	Gaeumannomyces graminis	26.92	1.00e-25	109.00
IUUC-Gga-040566	Gallus gallus	30.29	1.00e-36	144.00
IUUC-Gac-042422	Gasterosteus aculeatus	29.55	2.00e-34	137.00
IUUC-Gma-044199	Glycine max	28.57	3.00e-19	87.00
IUUC-Ggo-045365	Gorilla gorilla	25.40	4.00e-22	97.10
IUUC-Hsa-046121	Homo sapiens	30.29	2.00e-38	150.00
IUUC-Itr-048361	Ictidomys tridecemlineatus	31.60	8.00e-36	142.00
IUUC-Kpa-049407	Komagataella pastoris	37.43	3.00e-59	220.00
IUUC-Lch-049767	Latimeria chalumnae	32.96	5.00e-37	146.00
IUUC-Loc-051940	Lepisosteus oculatus	32.54	1.00e-37	148.00
IUUC-Lma-053288	Leptosphaeria maculans	26.18	7.00e-28	116.00
IUUC-Laf-054463	Loxodonta africana	29.76	6.00e-36	142.00
IUUC-Mcc-055412	Macaca mulatta	29.60	3.00e-37	147.00
IUUC-Mor-056986	Magnaporthe oryzae	25.81	3.00e-25	107.00
IUUC-Mpo-057401	Magnaporthe poae	27.41	2.00e-27	114.00
IUUC-Mtr-057886	Medicago truncatula	28.57	8.00e-14	68.90
IUUC-Mla-058862	Melampsora laricipopulina	28.29	1.00e-13	69.30
IUUC-Mga-060109	Meleagris gallopavo	29.79	1.00e-32	131.00
IUUC-Mvi-060326	Microbotryum violaceum	34.56	4.00e-29	120.00
IUUC-Mmr-060681	Microcebus murinus	31.25	1.00e-35	141.00
IUUC-Mdo-063004	Monodelphis domestica	31.52	1.00e-35	141.00
IUUC-Mmu-064184	Mus musculus	29.55	2.00e-35	140.00
IUUC-Mac-064987	Musa acuminata	35.15	4.00e-17	80.10
IUUC-Mpu-065847	Mustela putorius furo	29.87	3.00e-35	140.00
IUUC-Mlu-067608	Myotis lucifugus	30.97	5.00e-38	149.00
IUUC-Nfi-068531	Neosartorya fischeri	29.56	5.00e-32	130.00
IUUC-Ncr-068937	Neurospora crassa	25.96	2.00e-25	108.00
IUUC-Nle-069302	Nomascus leucogenys	30.56	9.00e-38	149.00
IUUC-Ont-072591	Oreochromis niloticus	42.24	7.00e-34	135.00
IUUC-Oan-073558	Ornithorhynchus anatinus	31.60	2.00e-25	107.00
IUUC-Ocu-074558	Oryctolagus cuniculus	31.13	2.00e-33	134.00
IUUC-Ogu-078660	Oryza glumaepatula	24.52	2.00e-04	38.10
IUUC-Oin-079790	Oryza indica	23.75	5.00e-09	53.10
IUUC-Ome-081631	Oryza meridionalis	25.16	4.00e-05	40.40
IUUC-Opu-083394	Oryza punctata	25.00	7.00e-11	59.30
IUUC-Ola-086955	Oryzias latipes	31.00	7.00e-37	145.00
IUUC-Olu-087657	Ostreococcus lucimarinus	25.60	2.00e-13	68.20
IUUC-Oga-088108	Otolemur garnettii	31.73	1.00e-37	148.00
IUUC-Oar-090019	Ovis aries	29.43	7.00e-35	139.00
IUUC-Ptr-091544	Pan troglodytes	30.29	2.00e-38	150.00
IUUC-Pan-092562	Papio anubis	30.03	3.00e-37	147.00
IUUC-Psi-094025	Pelodiscus sinensis	32.52	7.00e-23	99.40
IUUC-Pma-094322	Petromyzon marinus	36.72	1.00e-30	124.00
IUUC-Pno-095112	Phaeosphaeria nodorum	29.18	2.00e-23	101.00
IUUC-Ppa-095541	Physcomitrella patens	32.21	5.00e-19	86.70
IUUC-Pfo-096667	Poecilia formosa	34.63	2.00e-30	124.00
IUUC-Pab-098064	Pongo abelii	30.29	4.00e-39	153.00
IUUC-Pop-099969	Populus trichocarpa	28.91	4.00e-14	70.10
IUUC-Pca-101053	Procavia capensis	29.91	3.00e-36	143.00
IUUC-Ppe-101839	Prunus persica	24.85	8.00e-17	79.00
IUUC-Pva-102963	Pteropus vampyrus	31.44	3.00e-34	137.00
IUUC-Pgr-103276	Puccinia graminis	26.17	5.00e-15	73.60
IUUC-Ptt-103769	Puccinia triticina	33.52	2.00e-17	80.90
IUUC-Pte-104117	Pyrenophora teres	30.34	7.00e-29	119.00
IUUC-Pyt-104649	Pyrenophora triticirepentis	30.25	2.00e-30	125.00
IUUC-Rno-105975	Rattus norvegicus	31.34	1.00e-36	144.00
IUUC-Sce-106226	Saccharomyces cerevisiae	39.78	3.00e-63	233.00
IUUC-Sha-106907	Sarcophilus harrisii	32.25	8.00e-36	142.00
IUUC-Sja-107867	Schizosaccharomyces japonicus	31.93	3.00e-15	73.60
IUUC-Spo-108377	Schizosaccharomyces pombe	24.84	6.00e-16	75.90
IUUC-Ssl-108647	Sclerotinia sclerotiorum	26.34	1.00e-27	115.00
IUUC-Smo-108738	Selaginella moellendorffii	28.03	4.00e-21	93.20
IUUC-Sly-111581	Solanum lycopersicum	27.00	4.00e-17	80.10
IUUC-Stu-112770	Solanum tuberosum	27.30	5.00e-18	82.80
IUUC-Sre-114941	Sporisorium reilianum	36.89	6.00e-34	136.00
IUUC-Ssc-116346	Sus scrofa	30.36	9.00e-36	142.00
IUUC-Tgu-116628	Taeniopygia guttata	33.21	2.00e-34	137.00
IUUC-Tru-117646	Takifugu rubripes	31.71	8.00e-34	135.00
IUUC-Tsy-119593	Tarsius syrichta	27.78	3.00e-17	80.90
IUUC-Tni-119872	Tetraodon nigroviridis	32.63	7.00e-38	148.00
IUUC-Tca-121500	Theobroma cacao	26.94	6.00e-19	85.90
IUUC-Tre-122151	Trichoderma reesei	27.06	2.00e-29	121.00
IUUC-Tvi-122619	Trichoderma virens	29.22	1.00e-27	115.00
IUUC-Tae-124450	Triticum aestivum	25.67	5.00e-05	39.70
IUUC-Tme-127158	Tuber melanosporum	28.57	7.00e-23	99.80
IUUC-Tbe-127959	Tupaia belangeri	36.93	1.00e-31	127.00
IUUC-Ttr-129125	Tursiops truncatus	30.95	1.00e-36	145.00
IUUC-Uma-129567	Ustilago maydis	37.33	3.00e-35	140.00
IUUC-Vda-129955	Verticillium dahliae	25.67	3.00e-24	103.00
IUUC-Vpa-130157	Vicugna pacos	38.69	2.00e-29	120.00
IUUC-Vvi-131065	Vitis vinifera	27.98	3.00e-20	90.50
IUUC-Xtr-132601	Xenopus tropicalis	29.69	3.00e-25	107.00
IUUC-Xma-133142	Xiphophorus maculatus	35.18	2.00e-35	140.00
IUUC-Zma-135330	Zea mays	31.28	3.00e-15	73.90

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence