iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-098968

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000350

Gene Name

POPTRDRAFT_730589; POPTR_0014s18590g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0014s18590	POPTR_0014s18590.1	POPTR_0014s18590.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.40e-30	103.0	343	375
UBD/Beta-Prp	1.00e-41	144.2	77	249

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWDl 30
           gH   v+c+++      +l+s+sdD+ti++W +
   Q: 343  GHLMTVNCVCWnpkRHQMLASASDDHTIRIWGP 375
           67789******9653389*************86 PP

UBD/Beta-Prp

   S: 85   kcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqclee..tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllr 173
           ++++tl++he++v+ ++fs +g++l+s s+d t+ +w++ ++  l+   +l+ h   v+ v+++pd+  l ++++ ++++lWd++tg++ +
   Q: 77   ETIQTLTEHENEVWFVQFSNNGEYLASSSSDCTAIIWKVLEDGRLSFkhMLRSHLTPVSFVAWSPDDTKLLTCGNVEVLKLWDVETGTCKH 167
           5677777777777777777777777777777777777777776665455777777777777777777777777777777777777777777 PP
   S: 174  tltgghtdsvyslsfdsngkelvsgsld..gtvklwdlqtgecvrtlnght.dnvksvrfspnderlvsgssDgsiriWdlrsg 254
           t+   h   v s ++ +++k++v gs d  + + +wd+  +e +++++g +   v++++++p++e l+s+ sD  iri ++r++
   Q: 168  TFGD-HGFVVSSCAWFPDSKRFVCGSSDpeKGICMWDCDGNE-IKAWRGTRmPKVLDLAVTPDGENLISVMSDLEIRILNVRTN 249
           7754.7777777777777777777777744457777775444.77777755356777777777777777777777777777765 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MELSKADDNV IHGQRKNLLT ELGTLLPPPT VLPERRLEHL VETAITAQID SCDYHNSVEP 60
ISLYEDHNCS RDQFPTETIQ TLTEHENEVW FVQFSNNGEY LASSSSDCTA IIWKVLEDGR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTACAAGCA GGGGAGGAAA AACTACCGCG AGCAGTAAGA AAAGAAGGAT CTATAAACGG 60
CACCGTTTTA CCGAACGACA GGACAAATGG TCTCGTGATG GTGGTGTCGA TGTGATCGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

pop:POPTR_0014s18590g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005958	Arabidopsis lyrata	72.30	2.00e-162	565.00
IUUC-Ath-006873	Arabidopsis thaliana	74.01	2.00e-163	568.00
IUUC-Afu-008972	Aspergillus fumigatus	37.46	5.00e-66	244.00
IUUC-Bdi-014476	Brachypodium distachyon	56.87	2.00e-116	412.00
IUUC-Bol-015916	Brassica oleracea	70.45	7.00e-163	566.00
IUUC-Bra-017911	Brassica rapa	69.45	5.00e-163	568.00
IUUC-Cho-024572	Choloepus hoffmanni	38.31	9.00e-53	200.00
IUUC-Cin-025474	Ciona intestinalis	40.36	6.00e-50	190.00
IUUC-Dre-028310	Danio rerio	43.55	5.00e-74	271.00
IUUC-Dor-030714	Dipodomys ordii	37.00	4.00e-54	204.00
IUUC-Gac-041991	Gasterosteus aculeatus	43.39	3.00e-77	281.00
IUUC-Gma-043704	Glycine max	77.99	1.00e-175	608.00
IUUC-Lch-049848	Latimeria chalumnae	41.92	6.00e-65	241.00
IUUC-Mtr-058724	Medicago truncatula	76.01	3.00e-174	603.00
IUUC-Mla-058912	Melampsora laricipopulina	39.84	5.00e-75	274.00
IUUC-Pma-094254	Petromyzon marinus	43.82	9.00e-80	290.00
IUUC-Ppe-101881	Prunus persica	77.75	4.00e-177	613.00
IUUC-Sit-110082	Setaria italica	54.79	4.00e-107	381.00
IUUC-Sly-111624	Solanum lycopersicum	69.55	4.00e-106	376.00
IUUC-Stu-112587	Solanum tuberosum	70.90	1.00e-124	439.00
IUUC-Tvi-122376	Trichoderma virens	36.34	2.00e-55	209.00
IUUC-Tae-124685	Triticum aestivum	57.85	4.00e-117	414.00
IUUC-Vvi-131027	Vitis vinifera	79.00	0.00e+00	633.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence