iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sja-107894

Ensembl Protein ID

EEB06430

UniProt Accession

B6JY12; B6JY12_SCHJY

Genbank Protein ID

EEB06430.1

Protein Name

WD repeat protein

Genbank Nucleotide ID

KE651168

Gene Name

SJAG_01472

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SJAG_01472	EEB06430	EEB06430

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.90e-31	103.1	253	287
UBD/Beta-Prp	2.70e-50	169.2	205	378

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtg 33
           gH ++v   ++ +d ++++++sdD+++ +W+ +tg
   Q: 253  GHDNEVAYAQWsPDdDYILTCSDDKKVILWNAHTG 287
           799999999***777****************8887 PP

UBD/Beta-Prp

   S: 44   llrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvv 144
           + + +++h++ v+ +++s++g +lv++s+Drt+ v+d+ + + +h l gh+++v   ++sp++d++++ s+d+ + +w+ +tg  ++ ++++h++ v+c +
   Q: 205  TTHIFEEHTDDVWHISYSHNGRYLVSASRDRTAVVYDVTATTVLHRLLGHDNEVAYAQWSPDDDYILTCSDDKKVILWNAHTGARVR-VFQKHSEPVSCCR 304
           467789999999999999999999999999999999999999999999999999999999999999999999999999999999999.9999999999999 PP
   S: 145  vhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsg......sldgtvklwdlqtgecvr 216
           + pdg+ +v+GslD  +  W l  g++l++++      +y ++++++gk+l  +      s+ + + ++ ++t +c++
   Q: 305  WLPDGQSFVTGSLDCSIIHWAL-DGTILHRWRD---LNIYDMDITPDGKRLFVVgvkqglSTEKHLSVYHMETRQCLK 378
           9999999999999999999988.9999999965...899999999999665443133333566777777777777765 PP

Organism

Schizosaccharomyces japonicus

Protein Sequence
(Fasta)

MDVTNKRKDE ITRLIVQALN EFGYRASASL LQKESGLELE SENVRNFREA IMSGKWAAAR 60
DYFERLTVRD ESIKKKAFFL IEKQKCLELA EQGKLSEAFN ELQKFSRAIP ELPVDTSFCV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AACTAGTCAA ATTATAGTTC ATAAATAATT CAATTTTCTA TTCATGATTA ATTTTAACGC 60
GTTGGTTTTT CCTGTTGTCG TGACAGCTAC TGGTTGCTCT AGAGGTGATA CGTGATTCGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006595--CTLH_C
IPR020472--G-protein_beta_WD-40_rep
IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00668--CTLH
SM00667--LisH
SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0044732--C:mitotic spindle pole body
GO:0005634--C:nucleus

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000905	Aegilops tauschii	34.30	9.00e-79	285.00
IUUC-Aml-001381	Ailuropoda melanoleuca	31.49	9.00e-64	235.00
IUUC-Atr-003020	Amborella trichopoda	35.10	2.00e-80	290.00
IUUC-Apl-003200	Anas platyrhynchos	30.61	1.00e-60	225.00
IUUC-Aca-005122	Anolis carolinensis	31.88	4.00e-64	237.00
IUUC-Aly-006260	Arabidopsis lyrata	35.62	2.00e-80	290.00
IUUC-Ath-007549	Arabidopsis thaliana	35.42	2.00e-79	287.00
IUUC-Acl-008259	Aspergillus clavatus	38.05	3.00e-93	333.00
IUUC-Afl-008669	Aspergillus flavus	37.04	9.00e-92	329.00
IUUC-Afu-008972	Aspergillus fumigatus	40.87	3.00e-74	270.00
IUUC-Ani-009455	Aspergillus nidulans	34.11	8.00e-79	286.00
IUUC-Ang-009832	Aspergillus niger	33.09	4.00e-85	306.00
IUUC-Aor-010221	Aspergillus oryzae	38.12	2.00e-94	338.00
IUUC-Ate-010262	Aspergillus terreus	36.78	2.00e-95	341.00
IUUC-Ame-011448	Astyanax mexicanus	33.01	8.00e-66	242.00
IUUC-Bgr-012047	Blumeria graminis	32.49	3.00e-74	270.00
IUUC-Bta-012566	Bos taurus	31.21	5.00e-59	219.00
IUUC-Bci-013589	Botrytis cinerea	33.40	4.00e-81	293.00
IUUC-Bdi-014338	Brachypodium distachyon	34.00	3.00e-79	287.00
IUUC-Bol-015855	Brassica oleracea	35.40	5.00e-80	289.00
IUUC-Bra-017245	Brassica rapa	35.86	1.00e-80	291.00
IUUC-Cja-019082	Callithrix jacchus	31.49	7.00e-64	236.00
IUUC-Cfa-020788	Canis familiaris	31.21	5.00e-59	219.00
IUUC-Cpo-022453	Cavia porcellus	31.43	8.00e-61	226.00
IUUC-Csa-023815	Chlorocebus sabaeus	31.74	7.00e-49	186.00
IUUC-Cho-024572	Choloepus hoffmanni	32.37	2.00e-41	161.00
IUUC-Cin-025474	Ciona intestinalis	34.53	4.00e-44	169.00
IUUC-Csv-026251	Ciona savignyi	30.65	1.00e-63	235.00
IUUC-Cgl-026607	Colletotrichum gloeosporioides	31.45	3.00e-66	244.00
IUUC-Cne-026805	Cryptococcus neoformans	28.21	2.00e-59	221.00
IUUC-Cme-027218	Cyanidioschyzon merolae	31.47	8.00e-43	166.00
IUUC-Dre-027404	Danio rerio	32.82	8.00e-61	226.00
IUUC-Dno-029089	Dasypus novemcinctus	30.87	5.00e-63	233.00
IUUC-Dor-030714	Dipodomys ordii	28.69	1.00e-35	142.00
IUUC-Dse-031569	Dothistroma septosporum	28.42	1.00e-63	235.00
IUUC-Dme-032077	Drosophila melanogaster	30.73	3.00e-56	211.00
IUUC-Eca-033943	Equus caballus	31.05	2.00e-59	221.00
IUUC-Eeu-034468	Erinaceus europaeus	42.31	1.00e-27	115.00
IUUC-Fca-036556	Felis catus	31.28	4.00e-56	210.00
IUUC-Fal-036639	Ficedula albicollis	30.16	1.00e-62	232.00
IUUC-Fox-037720	Fusarium oxysporum	34.58	7.00e-77	279.00
IUUC-Fso-038206	Fusarium solani	33.33	4.00e-71	260.00
IUUC-Gmo-038610	Gadus morhua	31.79	7.00e-63	233.00
IUUC-Ggr-039738	Gaeumannomyces graminis	31.08	2.00e-73	268.00
IUUC-Gga-040577	Gallus gallus	30.83	9.00e-64	236.00
IUUC-Gac-041352	Gasterosteus aculeatus	30.78	6.00e-64	236.00
IUUC-Gma-042660	Glycine max	35.52	1.00e-87	315.00
IUUC-Ggo-044684	Gorilla gorilla	31.49	7.00e-64	236.00
IUUC-Hsa-046838	Homo sapiens	31.49	7.00e-64	236.00
IUUC-Hvu-047226	Hordeum vulgare	34.32	1.00e-73	268.00
IUUC-Itr-048020	Ictidomys tridecemlineatus	31.49	7.00e-64	236.00
IUUC-Kpa-049141	Komagataella pastoris	29.38	3.00e-53	201.00
IUUC-Lch-049848	Latimeria chalumnae	31.39	1.00e-54	204.00
IUUC-Lpe-050963	Leersia perrieri	35.04	8.00e-87	312.00
IUUC-Loc-052708	Lepisosteus oculatus	32.14	7.00e-64	236.00
IUUC-Lma-053156	Leptosphaeria maculans	31.92	3.00e-74	270.00
IUUC-Laf-054153	Loxodonta africana	31.31	9.00e-64	236.00
IUUC-Mcc-054742	Macaca mulatta	31.49	7.00e-64	236.00
IUUC-Mor-056939	Magnaporthe oryzae	32.89	3.00e-78	284.00
IUUC-Mpo-057600	Magnaporthe poae	30.75	9.00e-71	259.00
IUUC-Mtr-058261	Medicago truncatula	34.98	5.00e-87	313.00
IUUC-Mla-058912	Melampsora laricipopulina	38.37	3.00e-82	296.00
IUUC-Mga-059811	Meleagris gallopavo	28.60	2.00e-48	184.00
IUUC-Mvi-060274	Microbotryum violaceum	33.52	3.00e-80	291.00
IUUC-Mmr-060823	Microcebus murinus	31.84	2.00e-63	235.00
IUUC-Mdo-062394	Monodelphis domestica	32.26	6.00e-64	237.00
IUUC-Mmu-063924	Mus musculus	31.49	2.00e-63	234.00
IUUC-Mac-065563	Musa acuminata	36.72	4.00e-89	320.00
IUUC-Mpu-066858	Mustela putorius furo	31.34	4.00e-63	233.00
IUUC-Mlu-067659	Myotis lucifugus	31.68	3.00e-64	237.00
IUUC-Nfi-068498	Neosartorya fischeri	37.28	1.00e-91	328.00
IUUC-Ncr-068832	Neurospora crassa	33.64	8.00e-72	262.00
IUUC-Nle-069654	Nomascus leucogenys	31.21	5.00e-59	219.00
IUUC-Ont-071547	Oreochromis niloticus	32.63	2.00e-65	241.00
IUUC-Oan-073045	Ornithorhynchus anatinus	30.00	1.00e-54	206.00
IUUC-Ocu-073812	Oryctolagus cuniculus	31.49	2.00e-62	231.00
IUUC-Oba-075071	Oryza barthii	35.11	2.00e-86	311.00
IUUC-Obr-076614	Oryza brachyantha	35.56	4.00e-87	313.00
IUUC-Ogl-076963	Oryza glaberrima	34.91	2.00e-86	311.00
IUUC-Ogu-078436	Oryza glumaepatula	34.91	2.00e-86	311.00
IUUC-Oin-080021	Oryza indica	35.11	2.00e-86	311.00
IUUC-Olo-080298	Oryza longistaminata	34.91	4.00e-86	310.00
IUUC-Ome-081202	Oryza meridionalis	35.11	3.00e-86	310.00
IUUC-Oni-082604	Oryza nivara	35.11	2.00e-86	311.00
IUUC-Opu-083763	Oryza punctata	35.50	3.00e-87	313.00
IUUC-Oru-084243	Oryza rufipogon	35.11	2.00e-86	311.00
IUUC-Osa-086153	Oryza sativa	32.32	4.00e-67	246.00
IUUC-Ola-086670	Oryzias latipes	31.16	2.00e-65	241.00
IUUC-Oga-088723	Otolemur garnettii	29.45	2.00e-52	198.00
IUUC-Oar-090125	Ovis aries	31.49	8.00e-64	236.00
IUUC-Ptr-090787	Pan troglodytes	31.21	5.00e-59	219.00
IUUC-Psi-093579	Pelodiscus sinensis	32.01	4.00e-60	223.00
IUUC-Pma-094254	Petromyzon marinus	34.32	1.00e-59	221.00
IUUC-Pno-094912	Phaeosphaeria nodorum	30.07	8.00e-71	259.00
IUUC-Ppa-095289	Physcomitrella patens	37.08	5.00e-88	316.00
IUUC-Pfo-096394	Poecilia formosa	32.63	9.00e-66	242.00
IUUC-Pab-098459	Pongo abelii	31.31	8.00e-62	229.00
IUUC-Pop-099989	Populus trichocarpa	35.63	8.00e-87	312.00
IUUC-Pca-100574	Procavia capensis	33.62	7.00e-36	142.00
IUUC-Ppe-101227	Prunus persica	33.33	5.00e-82	296.00
IUUC-Pva-102404	Pteropus vampyrus	30.27	2.00e-51	194.00
IUUC-Pgr-103411	Puccinia graminis	30.89	1.00e-34	140.00
IUUC-Ptt-103705	Puccinia triticina	26.01	5.00e-49	187.00
IUUC-Pte-104023	Pyrenophora teres	30.76	2.00e-73	268.00
IUUC-Pyt-104759	Pyrenophora triticirepentis	30.76	1.00e-72	266.00
IUUC-Rno-105335	Rattus norvegicus	31.21	1.00e-58	218.00
IUUC-Sha-106497	Sarcophilus harrisii	31.05	1.00e-59	222.00
IUUC-Spo-108235	Schizosaccharomyces pombe	52.80	3.00e-159	552.00
IUUC-Smo-109277	Selaginella moellendorffii	36.19	5.00e-90	323.00
IUUC-Sit-110575	Setaria italica	34.18	6.00e-82	296.00
IUUC-Sly-111167	Solanum lycopersicum	35.46	7.00e-86	309.00
IUUC-Stu-112726	Solanum tuberosum	33.40	1.00e-80	291.00
IUUC-Sar-113539	Sorex araneus	34.90	6.00e-30	123.00
IUUC-Sbi-114344	Sorghum bicolor	34.71	1.00e-82	298.00
IUUC-Sre-115051	Sporisorium reilianum	28.12	3.00e-39	154.00
IUUC-Ssc-115532	Sus scrofa	31.49	7.00e-64	236.00
IUUC-Tgu-116728	Taeniopygia guttata	31.07	3.00e-63	233.00
IUUC-Tru-118471	Takifugu rubripes	32.95	1.00e-69	255.00
IUUC-Tsy-119284	Tarsius syrichta	26.09	6.00e-37	146.00
IUUC-Tni-119720	Tetraodon nigroviridis	32.08	1.00e-66	244.00
IUUC-Tca-121103	Theobroma cacao	34.25	2.00e-81	294.00
IUUC-Tre-122234	Trichoderma reesei	33.53	1.00e-72	265.00
IUUC-Tvi-122376	Trichoderma virens	35.24	1.00e-54	204.00
IUUC-Tae-125635	Triticum aestivum	34.91	4.00e-83	300.00
IUUC-Tur-126726	Triticum urartu	32.96	2.00e-80	291.00
IUUC-Tme-126972	Tuber melanosporum	38.37	9.00e-97	346.00
IUUC-Ttr-129184	Tursiops truncatus	34.50	5.00e-56	209.00
IUUC-Uma-129354	Ustilago maydis	27.34	7.00e-36	143.00
IUUC-Vda-129770	Verticillium dahliae	32.29	2.00e-68	251.00
IUUC-Vpa-130400	Vicugna pacos	31.21	1.00e-57	215.00
IUUC-Vvi-130991	Vitis vinifera	35.42	2.00e-80	290.00
IUUC-Xtr-132619	Xenopus tropicalis	30.63	5.00e-61	227.00
IUUC-Xma-134128	Xiphophorus maculatus	32.63	8.00e-66	242.00
IUUC-Yli-134521	Yarrowia lipolytica	38.02	2.00e-93	334.00
IUUC-Zma-135772	Zea mays	33.73	6.00e-78	283.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence