iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSGALG00000008139.5	ENSGALT00000062122.1	ENSGALP00000054140.1
ENSGALG00000008139.5	ENSGALT00000013206.5	ENSGALP00000013191.5
ENSGALG00000008139.5	ENSGALT00000069676.1	ENSGALP00000044391.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.20e-21	76.2	378	409

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 4    dsvtclaf.sd.tllvsGsdDgtikvWDlrtg 33
           +++++la  ++ +l++s+s+Dgt ++WDl + 
   Q: 378  GEIWGLAThPSkDLFISASNDGTARIWDLCDK 409
           5688888787779***************9665 PP

Organism

Gallus gallus

Protein Sequence
(Fasta)

MLWFCNFVLL SNILIVFSFK HVSYRPPVSR AAPQPEKLQK NNINKKRKLV EELALDHVFG 60
YRGFDCRNNL HYLNDGADII FHTAAAGIVQ NLSTGSQSFY LEHTDDILCL TVNQHPKYKN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCTGTGGT TTTGCAATTT TGTTTTGCTT TCAAACATAT TGATTGTCTT CTCTTTTAAA 60
CACGTTTCTT ACAGGCCACC GGTTAGCAGA GCTGCTCCTC AGCCTGAAAA ACTGCAAAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0732--Signal
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR005108--HELP
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF03451--HELP
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0015630--C:microtubule cytoskeleton
GO:0008017--F:microtubule binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Cpo-021532	Cavia porcellus	92.47	0.00e+00	1196.00
IUUC-Cho-024558	Choloepus hoffmanni	95.49	0.00e+00	750.00
IUUC-Eeu-035180	Erinaceus europaeus	65.53	0.00e+00	829.00
IUUC-Opr-070957	Ochotona princeps	94.15	0.00e+00	739.00
IUUC-Sar-113150	Sorex araneus	94.43	0.00e+00	748.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence