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Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Hsa-046440
Ensembl Protein ID ENSP00000395793.3
UniProt Accession A0A088AWN2; A0A088AWN2_HUMAN
Genbank Protein ID ENSP00000395793
Protein Name WD repeat-containing protein 20
Genbank Nucleotide ID AL133223
Gene Name WDR20
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSG00000140153.17 ENST00000335263.9 ENSP00000335434.5
ENSG00000140153.17 ENST00000322340.9 ENSP00000314209.5
ENSG00000140153.17 ENST00000555879.5 ENSP00000452470.1
ENSG00000140153.17 ENST00000342702.7 ENSP00000341037.3
ENSG00000140153.17 ENST00000556807.1 ENSP00000450636.1
ENSG00000140153.17 ENST00000558567.5 ENSP00000452774.1
ENSG00000140153.17 ENST00000454394.2 ENSP00000406084.2
ENSG00000140153.17 ENST00000556094.1 ENSP00000452539.1
ENSG00000140153.17 ENST00000556511.2 ENSP00000451633.2
ENSG00000140153.17 ENST00000559478.1 ENSP00000452638.1
ENSG00000140153.17 ENST00000424963.6 ENSP00000395793.3
Annotation
Cancer Mutation
TCGAICGCCOSMICCGAP
IntOGen
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpressTCGAICGC
COSMICHPM
DNA & RNA Element
UTRdbAREsitecircBasecircRNADb
CircNetmiRTarBasemicroRNATRANSFAC
RepTarSomamiRmiRcodeRAID2
Protein-protein Interaction
HINTInWeb_IM
Disease-associated Variation
GWASdb
Post-translational Modifications (PTMs)
dbPAFPHOSIDABioGRID
DNA Methylation
TCGAICGCCOSMIC
Protein Expression/Proteomics
THPAHPMGPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 4.30e-12 47.4 297 326
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 7    tclaf.sd.tllvsGsdDgtikvWDlrtgv 34
            c+++ +d +++v+G+ D  + vW++ +++
   Q: 297  LCVCWsPDgKYIVTGGEDDLVTVWSFVDCR 326
           6*****999****************88776 PP
   
Organism Homo sapiens
Protein Sequence
(Fasta)
MATEGGGKEM NEIKTQFTTR EGLYKLLPHS EYSRPNRVPF NSQGSNPVRV SFVNLNDQSG 60
NGDRLCFNVG RELYFYIYKG VRKAADLSKP IDKRIYKGTQ PTCHDFNHLT ATAESVSLLV 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Hsa-046440|E3,WD_repeat|Homo sapiens
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GCAGGGCGGG AGACCGCTGA GGAGGCACCC TCAAGTTCAC CTCAGGCTCA TGACACCAGC 60
CCCGCCGCGG TTCCCCCTGA CCGGCTTTCC GCTGGCCCTG GCGGCTGCGG AACGGTCAAC 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Hsa-046440|E3,WD_repeat|Homo sapiens
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0853--WD repeat
Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF00400--WD40
SMART

SM00320--WD40
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000844 Aegilops tauschii 34.55 2.00e-34 140.00
IUUC-Aml-001749 Ailuropoda melanoleuca 90.60 0.00e+00 1065.00
IUUC-Atr-002459 Amborella trichopoda 34.44 2.00e-52 200.00
IUUC-Apl-003710 Anas platyrhynchos 90.13 0.00e+00 946.00
IUUC-Aca-004914 Anolis carolinensis 90.70 0.00e+00 1084.00
IUUC-Aly-005833 Arabidopsis lyrata 34.81 2.00e-53 203.00
IUUC-Ath-006649 Arabidopsis thaliana 34.81 3.00e-53 203.00
IUUC-Afl-008642 Aspergillus flavus 27.97 3.00e-55 209.00
IUUC-Aor-010159 Aspergillus oryzae 27.97 3.00e-55 209.00
IUUC-Ate-010476 Aspergillus terreus 32.26 9.00e-54 204.00
IUUC-Ame-010700 Astyanax mexicanus 84.22 0.00e+00 1060.00
IUUC-Bta-013293 Bos taurus 91.60 0.00e+00 1028.00
IUUC-Bdi-014307 Brachypodium distachyon 35.26 6.00e-52 198.00
IUUC-Bol-015990 Brassica oleracea 34.61 3.00e-51 196.00
IUUC-Bra-017842 Brassica rapa 24.39 2.00e-17 84.00
IUUC-Cel-018407 Caenorhabditis elegans 37.46 7.00e-116 411.00
IUUC-Cja-019007 Callithrix jacchus 98.64 0.00e+00 1213.00
IUUC-Cfa-020697 Canis familiaris 96.81 0.00e+00 732.00
IUUC-Cpo-022464 Cavia porcellus 85.31 0.00e+00 943.00
IUUC-Csa-023594 Chlorocebus sabaeus 94.79 0.00e+00 1159.00
IUUC-Cho-024294 Choloepus hoffmanni 88.99 2.00e-169 588.00
IUUC-Cin-025617 Ciona intestinalis 44.75 1.00e-82 300.00
IUUC-Cne-026940 Cryptococcus neoformans 27.87 1.00e-27 118.00
IUUC-Cme-027228 Cyanidioschyzon merolae 26.46 8.00e-20 93.20
IUUC-Dre-027892 Danio rerio 82.59 0.00e+00 1023.00
IUUC-Dno-029016 Dasypus novemcinctus 92.40 0.00e+00 1088.00
IUUC-Dor-030179 Dipodomys ordii 84.48 0.00e+00 1003.00
IUUC-Dme-031790 Drosophila melanogaster 48.41 9.00e-105 375.00
IUUC-Eca-033704 Equus caballus 91.90 0.00e+00 890.00
IUUC-Eeu-034912 Erinaceus europaeus 93.84 0.00e+00 658.00
IUUC-Fca-036140 Felis catus 92.65 0.00e+00 1084.00
IUUC-Fal-037163 Ficedula albicollis 91.54 0.00e+00 1105.00
IUUC-Gmo-039220 Gadus morhua 80.97 0.00e+00 1021.00
IUUC-Gga-040768 Gallus gallus 91.36 0.00e+00 1106.00
IUUC-Gac-042612 Gasterosteus aculeatus 83.49 0.00e+00 1053.00
IUUC-Gma-044186 Glycine max 34.97 1.00e-54 207.00
IUUC-Ggo-045322 Gorilla gorilla 99.33 0.00e+00 1241.00
IUUC-Hvu-047057 Hordeum vulgare 29.54 5.00e-21 95.10
IUUC-Itr-048055 Ictidomys tridecemlineatus 94.20 0.00e+00 1135.00
IUUC-Lch-049678 Latimeria chalumnae 88.39 0.00e+00 1102.00
IUUC-Lpe-051378 Leersia perrieri 34.79 3.00e-50 192.00
IUUC-Loc-051970 Lepisosteus oculatus 86.17 0.00e+00 1065.00
IUUC-Laf-053660 Loxodonta africana 93.27 0.00e+00 1105.00
IUUC-Mcc-055671 Macaca mulatta 92.87 0.00e+00 987.00
IUUC-Meu-056346 Macropus eugenii 97.07 0.00e+00 652.00
IUUC-Mtr-058649 Medicago truncatula 35.44 3.00e-54 206.00
IUUC-Mga-059701 Meleagris gallopavo 90.38 0.00e+00 936.00
IUUC-Mmr-060982 Microcebus murinus 99.02 0.00e+00 1263.00
IUUC-Mdo-062998 Monodelphis domestica 91.53 0.00e+00 1069.00
IUUC-Mmu-064199 Mus musculus 93.11 0.00e+00 1139.00
IUUC-Mac-065546 Musa acuminata 34.81 8.00e-52 198.00
IUUC-Mpu-066310 Mustela putorius furo 91.93 0.00e+00 1049.00
IUUC-Mlu-068216 Myotis lucifugus 92.27 0.00e+00 1092.00
IUUC-Ncr-068904 Neurospora crassa 26.93 4.00e-52 199.00
IUUC-Nle-069233 Nomascus leucogenys 94.45 0.00e+00 1156.00
IUUC-Opr-071024 Ochotona princeps 92.32 0.00e+00 1050.00
IUUC-Ont-072202 Oreochromis niloticus 83.31 0.00e+00 1038.00
IUUC-Oan-073075 Ornithorhynchus anatinus 90.56 0.00e+00 937.00
IUUC-Ocu-073978 Oryctolagus cuniculus 94.12 0.00e+00 1151.00
IUUC-Oba-075973 Oryza barthii 42.68 4.00e-49 189.00
IUUC-Obr-076346 Oryza brachyantha 35.34 6.00e-51 195.00
IUUC-Ogl-077048 Oryza glaberrima 35.34 2.00e-50 193.00
IUUC-Ogu-078225 Oryza glumaepatula 34.32 5.00e-48 185.00
IUUC-Oin-079597 Oryza indica 33.69 6.00e-53 202.00
IUUC-Olo-080349 Oryza longistaminata 41.54 8.00e-24 104.00
IUUC-Oni-082556 Oryza nivara 41.87 4.00e-49 189.00
IUUC-Opu-083440 Oryza punctata 34.67 3.00e-51 196.00
IUUC-Oru-085085 Oryza rufipogon 33.16 4.00e-53 202.00
IUUC-Osa-085527 Oryza sativa 33.42 1.00e-53 204.00
IUUC-Ola-086647 Oryzias latipes 82.66 0.00e+00 1038.00
IUUC-Oga-088879 Otolemur garnettii 92.26 0.00e+00 1142.00
IUUC-Oar-089333 Ovis aries 90.54 0.00e+00 1023.00
IUUC-Ptr-090538 Pan troglodytes 99.84 0.00e+00 1272.00
IUUC-Pan-092473 Papio anubis 94.62 0.00e+00 1156.00
IUUC-Psi-094013 Pelodiscus sinensis 90.81 0.00e+00 1116.00
IUUC-Ppa-095812 Physcomitrella patens 34.46 9.00e-53 201.00
IUUC-Pfo-096913 Poecilia formosa 81.63 0.00e+00 967.00
IUUC-Pab-098503 Pongo abelii 94.63 0.00e+00 1158.00
IUUC-Pop-099670 Populus trichocarpa 34.20 1.00e-50 194.00
IUUC-Pca-100287 Procavia capensis 91.67 0.00e+00 1112.00
IUUC-Ppe-101841 Prunus persica 33.15 8.00e-53 201.00
IUUC-Pva-102826 Pteropus vampyrus 92.65 0.00e+00 1106.00
IUUC-Pgr-103681 Puccinia graminis 29.25 5.00e-33 136.00
IUUC-Rno-106076 Rattus norvegicus 93.11 0.00e+00 1142.00
IUUC-Sha-107220 Sarcophilus harrisii 91.53 0.00e+00 1069.00
IUUC-Smo-108846 Selaginella moellendorffii 35.42 3.00e-55 209.00
IUUC-Sit-109904 Setaria italica 33.97 4.00e-54 206.00
IUUC-Sly-111266 Solanum lycopersicum 34.16 2.00e-53 203.00
IUUC-Stu-112818 Solanum tuberosum 33.61 6.00e-53 202.00
IUUC-Sbi-114804 Sorghum bicolor 35.37 6.00e-53 202.00
IUUC-Sre-115177 Sporisorium reilianum 38.80 5.00e-32 133.00
IUUC-Ssc-116048 Sus scrofa 90.96 0.00e+00 1057.00
IUUC-Tgu-116514 Taeniopygia guttata 91.83 0.00e+00 944.00
IUUC-Tru-117529 Takifugu rubripes 82.52 0.00e+00 1045.00
IUUC-Tsy-119611 Tarsius syrichta 93.63 0.00e+00 1158.00
IUUC-Tni-120859 Tetraodon nigroviridis 84.49 0.00e+00 1001.00
IUUC-Tca-121339 Theobroma cacao 34.90 2.00e-53 204.00
IUUC-Tae-125451 Triticum aestivum 34.79 2.00e-50 193.00
IUUC-Tur-126428 Triticum urartu 31.25 3.00e-35 142.00
IUUC-Tme-126969 Tuber melanosporum 29.50 6.00e-54 205.00
IUUC-Tbe-127985 Tupaia belangeri 88.25 0.00e+00 981.00
IUUC-Ttr-128936 Tursiops truncatus 91.83 0.00e+00 1106.00
IUUC-Vvi-131155 Vitis vinifera 35.26 3.00e-53 203.00
IUUC-Xtr-131864 Xenopus tropicalis 88.53 0.00e+00 1083.00
IUUC-Xma-133459 Xiphophorus maculatus 81.30 0.00e+00 991.00
Created Date 25-Jun-2017

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