iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Fso-038268

Ensembl Protein ID

NechaP101743

UniProt Accession

C7YV87; C7YV87_NECH7

Genbank Protein ID

EEU44942.1

Protein Name

Coatomer subunit beta'

Genbank Nucleotide ID

GG698900

Gene Name

NECHADRAFT_101743

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
NechaG101743	NechaT101743	NechaP101743

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.20e-30	101.1	100	133
UBD/Beta-Prp	7.80e-63	212.1	13	304

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtg 33
           H d ++++a  ++ ++++++sdD tik+WD+ +g
   Q: 100  HPDYIRAIAIhPTqPFVLTASDDMTIKLWDWEKG 133
           99*********888****************8765 PP

UBD/Beta-Prp

   S: 10   ksvitcvkfspdksllatgsr....dgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsf 102
           +++++ ++f+p++++++t+ +    +g + +w+++t++ +++++  + +v+a +f  +++++v gs+D  ++v++++t++ + ++++h d+++++++
   Q: 13   SERVKGIDFHPHEPWILTTLYsadsSGHVYIWSYETQQIVKTFELTDVPVRAGRFVARKNWIVCGSDDFQLRVYNYNTSEKITSFEAHPDYIRAIAI 109
           678999************97622225789******************************************************************** PP
   S: 103  spsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsng..kelv 196
           +p++ +++++s+d ti++wd+e+g++  ++++gh + v++++++p++ n ++s++lDrtv++W+l + +   tl+   t+ v+++++ + +  ++l+
   Q: 110  HPTQPFVLTASDDMTIKLWDWEKGWKCVQVFEGHGHYVMGLAINPKDtNTFASACLDRTVKIWSLGSSTPNFTLEAHETKGVNHVDYYPHSdkPYLL 206
           ************************98888***********************************************99********8887777**** PP
   S: 197  sgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnssvisvavlsfgdnvlvlgsedskvniwk 293
           + s+d+tvk+wd+ t++ + tl+ght+nv+    +p+   ++sgs+Dg+iriW   +  + ++l+++ ++ ++v++   +++  v++++d+ + + k
   Q: 207  TTSDDRTVKIWDYTTKSLIATLEGHTNNVSFACYHPELPVIISGSEDGTIRIWHANTYRFEQSLNYSLERAWCVSY--QKGKQGVAVGFDDGAVVVK 301
           ***************************************************************************9..6677777777766666667 PP
   S: 294  lkk 296
           l +
   Q: 302  LGR 304
           665 PP

Organism

Fusarium solani

Functional Description
(View)

The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.

Protein Sequence
(Fasta)

MKLDVKRQLY ARSERVKGID FHPHEPWILT TLYSADSSGH VYIWSYETQQ IVKTFELTDV 60
PVRAGRFVAR KNWIVCGSDD FQLRVYNYNT SEKITSFEAH PDYIRAIAIH PTQPFVLTAS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAGTTAG ACGTCAAGGT CAGTCTCGTG ACTGCTTCCG TGCGCCAGAG CCAAGCCGTG 60
GCAATCTCCA TTGCTATCTG AGCTTGGTCT TGACTCCTCA ACCTGCGATT TGAGCTGACA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0968--Cytoplasmic vesicle
KW-0931--ER-Golgi transport
KW-0333--Golgi apparatus
KW-0472--Membrane
KW-0653--Protein transport
KW-1185--Reference proteome
KW-0677--Repeat
KW-0813--Transport
KW-0853--WD repeat

Interpro

IPR006692--Coatomer_WD-assoc_reg
IPR016453--COPB2
IPR020472--G-protein_beta_WD-40_rep
IPR002469--Peptidase_S9B_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04053--Coatomer_WDAD
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0030126--C:COPI vesicle coat
GO:0005829--C:cytosol
GO:0000139--C:Golgi membrane
GO:0005634--C:nucleus
GO:0005198--F:structural molecule activity
GO:0006888--P:ER to Golgi vesicle-mediated transport
GO:0006886--P:intracellular protein transport
GO:0032511--P:late endosome to vacuole transport via multivesicular body sorting pathway
GO:0006890--P:retrograde vesicle-mediated transport, Golgi to ER

KEGG

nhe:NECHADRAFT_101743

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000654	Aegilops tauschii	44.91	0.00e+00	767.00
IUUC-Aml-002154	Ailuropoda melanoleuca	56.29	0.00e+00	971.00
IUUC-Atr-003090	Amborella trichopoda	53.85	0.00e+00	889.00
IUUC-Apl-003976	Anas platyrhynchos	56.54	0.00e+00	970.00
IUUC-Aca-004301	Anolis carolinensis	56.42	0.00e+00	970.00
IUUC-Aly-006508	Arabidopsis lyrata	53.02	0.00e+00	909.00
IUUC-Ath-007635	Arabidopsis thaliana	53.26	0.00e+00	912.00
IUUC-Ago-007914	Ashbya gossypii	49.70	0.00e+00	827.00
IUUC-Acl-008237	Aspergillus clavatus	77.93	0.00e+00	1339.00
IUUC-Afl-008535	Aspergillus flavus	77.98	0.00e+00	1291.00
IUUC-Afu-008845	Aspergillus fumigatus	78.05	0.00e+00	1311.00
IUUC-Ani-009135	Aspergillus nidulans	77.62	0.00e+00	1299.00
IUUC-Ang-009654	Aspergillus niger	83.33	0.00e+00	1182.00
IUUC-Aor-009939	Aspergillus oryzae	78.39	0.00e+00	1360.00
IUUC-Ate-010355	Aspergillus terreus	78.17	0.00e+00	1305.00
IUUC-Ame-010922	Astyanax mexicanus	51.84	0.00e+00	838.00
IUUC-Bgr-012249	Blumeria graminis	81.74	0.00e+00	1381.00
IUUC-Bta-013579	Bos taurus	57.22	0.00e+00	879.00
IUUC-Bci-013866	Botrytis cinerea	85.09	0.00e+00	1393.00
IUUC-Bdi-015046	Brachypodium distachyon	52.29	0.00e+00	904.00
IUUC-Bol-016271	Brassica oleracea	53.16	0.00e+00	919.00
IUUC-Bra-017758	Brassica rapa	52.91	0.00e+00	916.00
IUUC-Cel-018387	Caenorhabditis elegans	51.09	0.00e+00	872.00
IUUC-Cja-019145	Callithrix jacchus	56.29	0.00e+00	971.00
IUUC-Cfa-020564	Canis familiaris	56.29	0.00e+00	971.00
IUUC-Cpo-022201	Cavia porcellus	56.17	0.00e+00	970.00
IUUC-Cre-022938	Chlamydomonas reinhardtii	52.70	0.00e+00	844.00
IUUC-Csa-023383	Chlorocebus sabaeus	59.86	0.00e+00	751.00
IUUC-Cho-024454	Choloepus hoffmanni	53.10	0.00e+00	823.00
IUUC-Cin-025681	Ciona intestinalis	54.04	0.00e+00	885.00
IUUC-Csv-026012	Ciona savignyi	53.92	0.00e+00	871.00
IUUC-Cgl-026649	Colletotrichum gloeosporioides	83.13	0.00e+00	1336.00
IUUC-Cne-026986	Cryptococcus neoformans	57.11	0.00e+00	971.00
IUUC-Cme-027219	Cyanidioschyzon merolae	43.49	0.00e+00	746.00
IUUC-Dre-027846	Danio rerio	55.25	0.00e+00	964.00
IUUC-Dor-030462	Dipodomys ordii	54.99	0.00e+00	788.00
IUUC-Dse-031268	Dothistroma septosporum	77.02	0.00e+00	1296.00
IUUC-Dme-031791	Drosophila melanogaster	53.67	0.00e+00	905.00
IUUC-Ete-033166	Echinops telfairi	53.19	1.00e-180	625.00
IUUC-Eca-034180	Equus caballus	54.39	0.00e+00	923.00
IUUC-Eeu-035086	Erinaceus europaeus	45.23	8.00e-102	363.00
IUUC-Fca-036265	Felis catus	56.29	0.00e+00	971.00
IUUC-Fal-037202	Ficedula albicollis	56.19	0.00e+00	927.00
IUUC-Fox-037711	Fusarium oxysporum	95.28	0.00e+00	1465.00
IUUC-Gmo-039046	Gadus morhua	55.43	0.00e+00	951.00
IUUC-Ggr-039863	Gaeumannomyces graminis	89.18	0.00e+00	1424.00
IUUC-Gga-041112	Gallus gallus	56.20	0.00e+00	969.00
IUUC-Gac-041733	Gasterosteus aculeatus	55.88	0.00e+00	930.00
IUUC-Gma-042910	Glycine max	53.78	0.00e+00	926.00
IUUC-Ggo-044984	Gorilla gorilla	56.29	0.00e+00	972.00
IUUC-Hsa-046698	Homo sapiens	56.29	0.00e+00	971.00
IUUC-Hvu-047669	Hordeum vulgare	59.50	6.00e-139	484.00
IUUC-Itr-048212	Ictidomys tridecemlineatus	56.29	0.00e+00	969.00
IUUC-Kpa-049265	Komagataella pastoris	56.61	0.00e+00	952.00
IUUC-Lch-050473	Latimeria chalumnae	54.64	0.00e+00	954.00
IUUC-Lpe-051579	Leersia perrieri	52.36	0.00e+00	900.00
IUUC-Loc-052675	Lepisosteus oculatus	55.93	0.00e+00	964.00
IUUC-Lma-053218	Leptosphaeria maculans	73.18	0.00e+00	1219.00
IUUC-Laf-053757	Loxodonta africana	56.03	0.00e+00	963.00
IUUC-Mcc-054859	Macaca mulatta	56.29	0.00e+00	972.00
IUUC-Meu-056174	Macropus eugenii	48.25	8.00e-90	323.00
IUUC-Mor-057264	Magnaporthe oryzae	88.94	0.00e+00	1391.00
IUUC-Mpo-057538	Magnaporthe poae	88.81	0.00e+00	1448.00
IUUC-Mtr-058310	Medicago truncatula	53.22	0.00e+00	930.00
IUUC-Mla-058937	Melampsora laricipopulina	56.72	0.00e+00	956.00
IUUC-Mga-059875	Meleagris gallopavo	56.06	0.00e+00	964.00
IUUC-Mvi-060240	Microbotryum violaceum	56.76	0.00e+00	953.00
IUUC-Mmr-061261	Microcebus murinus	56.29	0.00e+00	971.00
IUUC-Mdo-062076	Monodelphis domestica	56.32	0.00e+00	972.00
IUUC-Mmu-063324	Mus musculus	56.17	0.00e+00	971.00
IUUC-Mac-064636	Musa acuminata	51.26	0.00e+00	897.00
IUUC-Mpu-065961	Mustela putorius furo	56.29	0.00e+00	970.00
IUUC-Mlu-067059	Myotis lucifugus	55.56	0.00e+00	953.00
IUUC-Nfi-068277	Neosartorya fischeri	78.09	0.00e+00	1303.00
IUUC-Ncr-068659	Neurospora crassa	83.46	0.00e+00	1400.00
IUUC-Nle-069034	Nomascus leucogenys	56.29	0.00e+00	972.00
IUUC-Opr-070334	Ochotona princeps	57.55	0.00e+00	904.00
IUUC-Ont-071563	Oreochromis niloticus	55.39	0.00e+00	955.00
IUUC-Oan-073416	Ornithorhynchus anatinus	56.23	0.00e+00	924.00
IUUC-Ocu-074522	Oryctolagus cuniculus	56.29	0.00e+00	967.00
IUUC-Oba-075760	Oryza barthii	51.09	0.00e+00	891.00
IUUC-Obr-076163	Oryza brachyantha	52.53	0.00e+00	899.00
IUUC-Ogl-077450	Oryza glaberrima	51.58	0.00e+00	911.00
IUUC-Ogu-078994	Oryza glumaepatula	51.09	0.00e+00	890.00
IUUC-Oin-079856	Oryza indica	52.73	0.00e+00	891.00
IUUC-Olo-080731	Oryza longistaminata	51.57	0.00e+00	878.00
IUUC-Ome-081554	Oryza meridionalis	49.22	0.00e+00	822.00
IUUC-Oni-082324	Oryza nivara	51.09	0.00e+00	890.00
IUUC-Opu-083400	Oryza punctata	50.70	0.00e+00	874.00
IUUC-Oru-084829	Oryza rufipogon	51.09	0.00e+00	891.00
IUUC-Osa-086026	Oryza sativa	51.82	0.00e+00	915.00
IUUC-Ola-087245	Oryzias latipes	55.39	0.00e+00	956.00
IUUC-Olu-087655	Ostreococcus lucimarinus	52.58	0.00e+00	866.00
IUUC-Oga-088163	Otolemur garnettii	54.45	0.00e+00	924.00
IUUC-Oar-089842	Ovis aries	56.17	0.00e+00	970.00
IUUC-Ptr-090501	Pan troglodytes	56.29	0.00e+00	972.00
IUUC-Pan-092011	Papio anubis	56.29	0.00e+00	972.00
IUUC-Psi-093308	Pelodiscus sinensis	56.25	0.00e+00	969.00
IUUC-Pma-094695	Petromyzon marinus	55.71	0.00e+00	883.00
IUUC-Pno-094785	Phaeosphaeria nodorum	78.20	3.00e-140	490.00
IUUC-Ppa-095638	Physcomitrella patens	54.75	0.00e+00	922.00
IUUC-Pfo-096587	Poecilia formosa	55.64	0.00e+00	960.00
IUUC-Pab-097926	Pongo abelii	55.03	0.00e+00	897.00
IUUC-Pop-099634	Populus trichocarpa	53.20	0.00e+00	926.00
IUUC-Pca-100965	Procavia capensis	55.07	0.00e+00	934.00
IUUC-Ppe-101470	Prunus persica	53.51	0.00e+00	926.00
IUUC-Pva-102451	Pteropus vampyrus	54.25	0.00e+00	771.00
IUUC-Pgr-103590	Puccinia graminis	57.14	0.00e+00	962.00
IUUC-Ptt-103868	Puccinia triticina	56.90	0.00e+00	959.00
IUUC-Pte-104274	Pyrenophora teres	75.06	0.00e+00	1250.00
IUUC-Pyt-104794	Pyrenophora triticirepentis	74.37	0.00e+00	1198.00
IUUC-Rno-105979	Rattus norvegicus	48.51	0.00e+00	728.00
IUUC-Sce-106269	Saccharomyces cerevisiae	52.07	0.00e+00	865.00
IUUC-Sha-106905	Sarcophilus harrisii	56.20	0.00e+00	969.00
IUUC-Sja-107838	Schizosaccharomyces japonicus	51.64	0.00e+00	858.00
IUUC-Spo-108299	Schizosaccharomyces pombe	53.58	0.00e+00	902.00
IUUC-Smo-108828	Selaginella moellendorffii	52.71	0.00e+00	911.00
IUUC-Sit-110239	Setaria italica	52.19	0.00e+00	912.00
IUUC-Sly-111775	Solanum lycopersicum	53.76	0.00e+00	914.00
IUUC-Stu-112906	Solanum tuberosum	53.16	0.00e+00	837.00
IUUC-Sar-113472	Sorex araneus	54.59	0.00e+00	715.00
IUUC-Sbi-114052	Sorghum bicolor	52.88	0.00e+00	924.00
IUUC-Sre-115040	Sporisorium reilianum	56.38	0.00e+00	948.00
IUUC-Ssc-115593	Sus scrofa	56.17	0.00e+00	969.00
IUUC-Tgu-117239	Taeniopygia guttata	56.42	0.00e+00	970.00
IUUC-Tru-118025	Takifugu rubripes	55.57	0.00e+00	956.00
IUUC-Tsy-118824	Tarsius syrichta	53.00	0.00e+00	707.00
IUUC-Tni-120142	Tetraodon nigroviridis	55.51	0.00e+00	952.00
IUUC-Tca-121613	Theobroma cacao	53.76	0.00e+00	925.00
IUUC-Tre-122072	Trichoderma reesei	87.10	0.00e+00	1420.00
IUUC-Tvi-122546	Trichoderma virens	88.19	0.00e+00	1433.00
IUUC-Tae-125488	Triticum aestivum	51.70	0.00e+00	905.00
IUUC-Tur-126283	Triticum urartu	45.25	0.00e+00	769.00
IUUC-Tme-127041	Tuber melanosporum	75.43	0.00e+00	1283.00
IUUC-Tbe-127770	Tupaia belangeri	56.04	0.00e+00	809.00
IUUC-Ttr-129294	Tursiops truncatus	56.17	0.00e+00	966.00
IUUC-Uma-129351	Ustilago maydis	53.92	0.00e+00	943.00
IUUC-Vda-129716	Verticillium dahliae	87.01	0.00e+00	1461.00
IUUC-Vpa-130037	Vicugna pacos	46.70	7.00e-111	393.00
IUUC-Vvi-131689	Vitis vinifera	54.37	0.00e+00	924.00
IUUC-Xtr-132633	Xenopus tropicalis	55.80	0.00e+00	956.00
IUUC-Xma-133347	Xiphophorus maculatus	55.51	0.00e+00	958.00
IUUC-Yli-134455	Yarrowia lipolytica	58.72	0.00e+00	956.00
IUUC-Zma-135867	Zea mays	52.54	0.00e+00	922.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence