iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aly-006074

Ensembl Protein ID

fgenesh1_pm.C_scaffold_6000874

UniProt Accession

D7M3N6; D7M3N6_ARALL

Genbank Protein ID

EFH47725.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL348718

Gene Name

ARALYDRAFT_325654

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh1_pm.C_scaffold_6000874	fgenesh1_pm.C_scaffold_6000874	fgenesh1_pm.C_scaffold_6000874

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.80e-09	38.2	196	227

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtl.lvsGsdDgtikvWD 29
           gH ++v+c+af  ++++ l+s+ +   i vW 
   Q: 196  GHPGGVRCVAFteDGKYvLSSAVGERYIAVWK 227
           899********9544772555669999****8 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MNLVNIKDVL TSFSPALDYL ALSTGDGRIK IWDTVKGQVQ TEFADIASTE ETNIYTKVGK 60
GHLSVDYTCM KWLSLEKKKK RKLGTSVLVL GTGGGDVLAL DVASGQLKWR ISDCHPGGVN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAATTTGG TGAATATTAA AGATGTATTG ACTTCTTTCA GTCCTGCACT TGATTATCTC 60
GCTCTTAGCA CCGGAGATGG CCGTATCAAG GTATCTTCAC TTTTCTTCTT CTATGGTTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR027295--Quinoprotein_ADH-like_fam
IPR011047--Quinoprotein_ADH-like_supfam
IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04003--Utp12
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005730--C:nucleolus
GO:0006364--P:rRNA processing

KEGG

aly:ARALYDRAFT_325654

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001865	Ailuropoda melanoleuca	27.61	8.00e-25	108.00
IUUC-Atr-002533	Amborella trichopoda	45.54	8.00e-144	503.00
IUUC-Apl-003242	Anas platyrhynchos	22.70	9.00e-22	97.80
IUUC-Aca-004607	Anolis carolinensis	23.03	2.00e-28	119.00
IUUC-Ath-007222	Arabidopsis thaliana	96.11	0.00e+00	997.00
IUUC-Ame-011014	Astyanax mexicanus	29.69	1.00e-19	91.30
IUUC-Bta-012605	Bos taurus	26.94	2.00e-23	103.00
IUUC-Bdi-014072	Brachypodium distachyon	47.40	2.00e-138	485.00
IUUC-Bol-016255	Brassica oleracea	87.03	0.00e+00	1030.00
IUUC-Bra-017484	Brassica rapa	88.62	0.00e+00	1025.00
IUUC-Cja-019620	Callithrix jacchus	27.61	2.00e-24	106.00
IUUC-Cfa-020520	Canis familiaris	29.04	6.00e-25	108.00
IUUC-Cpo-022456	Cavia porcellus	26.60	3.00e-24	105.00
IUUC-Cho-024726	Choloepus hoffmanni	27.94	1.00e-23	104.00
IUUC-Dre-028051	Danio rerio	31.15	1.00e-23	103.00
IUUC-Dno-030031	Dasypus novemcinctus	28.31	1.00e-23	103.00
IUUC-Ete-032863	Echinops telfairi	29.20	3.00e-10	60.10
IUUC-Eca-033243	Equus caballus	27.18	1.00e-15	77.80
IUUC-Eeu-034970	Erinaceus europaeus	32.14	2.00e-09	57.40
IUUC-Fca-036009	Felis catus	27.27	2.00e-24	106.00
IUUC-Fal-037264	Ficedula albicollis	23.29	3.00e-22	99.40
IUUC-Gmo-039124	Gadus morhua	29.93	1.00e-27	117.00
IUUC-Gga-040862	Gallus gallus	26.04	1.00e-26	114.00
IUUC-Gac-041468	Gasterosteus aculeatus	32.12	2.00e-28	120.00
IUUC-Gma-042795	Glycine max	56.19	2.00e-170	591.00
IUUC-Ggo-044432	Gorilla gorilla	23.40	7.00e-26	111.00
IUUC-Hsa-047036	Homo sapiens	23.23	3.00e-25	109.00
IUUC-Hvu-047736	Hordeum vulgare	26.99	1.00e-22	99.80
IUUC-Itr-048644	Ictidomys tridecemlineatus	27.61	1.00e-24	107.00
IUUC-Lch-049553	Latimeria chalumnae	23.41	1.00e-23	103.00
IUUC-Laf-053462	Loxodonta africana	26.94	1.00e-22	100.00
IUUC-Mcc-055239	Macaca mulatta	23.40	9.00e-26	111.00
IUUC-Mtr-057977	Medicago truncatula	56.39	9.00e-175	606.00
IUUC-Mga-060079	Meleagris gallopavo	24.52	7.00e-19	88.20
IUUC-Mmr-061472	Microcebus murinus	27.27	3.00e-24	106.00
IUUC-Mdo-061972	Monodelphis domestica	22.28	1.00e-26	114.00
IUUC-Mmu-063354	Mus musculus	27.70	3.00e-24	106.00
IUUC-Mac-065064	Musa acuminata	55.26	2.00e-134	471.00
IUUC-Mpu-066877	Mustela putorius furo	26.87	1.00e-23	103.00
IUUC-Mlu-067476	Myotis lucifugus	26.10	2.00e-20	93.60
IUUC-Nle-069119	Nomascus leucogenys	23.40	6.00e-26	112.00
IUUC-Ont-072093	Oreochromis niloticus	24.14	9.00e-32	131.00
IUUC-Oan-072944	Ornithorhynchus anatinus	21.49	2.00e-17	83.60
IUUC-Ocu-074472	Oryctolagus cuniculus	29.04	2.00e-24	106.00
IUUC-Oba-075009	Oryza barthii	47.10	4.00e-133	468.00
IUUC-Ogl-077189	Oryza glaberrima	44.56	2.00e-131	462.00
IUUC-Oin-079064	Oryza indica	47.27	3.00e-133	468.00
IUUC-Opu-083604	Oryza punctata	46.76	1.00e-134	472.00
IUUC-Oru-084620	Oryza rufipogon	47.27	6.00e-134	470.00
IUUC-Osa-085345	Oryza sativa	47.10	8.00e-134	469.00
IUUC-Ola-086626	Oryzias latipes	24.46	8.00e-31	128.00
IUUC-Oga-087911	Otolemur garnettii	23.91	6.00e-25	108.00
IUUC-Ptr-091603	Pan troglodytes	23.23	3.00e-25	109.00
IUUC-Pan-092569	Papio anubis	23.40	9.00e-26	111.00
IUUC-Pma-094287	Petromyzon marinus	21.29	3.00e-25	108.00
IUUC-Ppa-095327	Physcomitrella patens	40.05	6.00e-66	244.00
IUUC-Pfo-097292	Poecilia formosa	31.27	5.00e-27	115.00
IUUC-Pab-097878	Pongo abelii	23.23	3.00e-25	109.00
IUUC-Pop-099418	Populus trichocarpa	60.31	0.00e+00	653.00
IUUC-Pca-100941	Procavia capensis	30.24	2.00e-18	86.70
IUUC-Ppe-101779	Prunus persica	60.34	0.00e+00	686.00
IUUC-Pva-102493	Pteropus vampyrus	30.37	1.00e-17	84.30
IUUC-Rno-105084	Rattus norvegicus	27.70	3.00e-24	106.00
IUUC-Sha-107486	Sarcophilus harrisii	22.79	1.00e-26	114.00
IUUC-Smo-108825	Selaginella moellendorffii	32.64	2.00e-66	246.00
IUUC-Sit-110825	Setaria italica	46.27	2.00e-139	488.00
IUUC-Sly-111365	Solanum lycopersicum	56.94	2.00e-174	604.00
IUUC-Stu-112812	Solanum tuberosum	56.92	1.00e-173	602.00
IUUC-Sar-113326	Sorex araneus	29.55	5.00e-22	98.60
IUUC-Sbi-114426	Sorghum bicolor	45.85	1.00e-144	505.00
IUUC-Tgu-116726	Taeniopygia guttata	24.12	1.00e-28	120.00
IUUC-Tru-117848	Takifugu rubripes	24.20	2.00e-28	120.00
IUUC-Tni-120591	Tetraodon nigroviridis	31.02	3.00e-28	119.00
IUUC-Tca-121576	Theobroma cacao	60.92	0.00e+00	694.00
IUUC-Tae-125648	Triticum aestivum	47.68	1.00e-139	489.00
IUUC-Tbe-127832	Tupaia belangeri	27.85	2.00e-17	83.60
IUUC-Ttr-128812	Tursiops truncatus	22.48	4.00e-19	89.40
IUUC-Xma-133557	Xiphophorus maculatus	32.05	7.00e-28	118.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence