iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Atr-002533

Ensembl Protein ID

ERN03194

UniProt Accession

W1P6C2; W1P6C2_AMBTC

Genbank Protein ID

ERN03194.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

KI394358

Gene Name

AMTR_s00003p00144740

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AMTR_s00003p00144740	ERN03194	ERN03194

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.00e-08	33.8	13	35

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 11   f.sd.tllvsGsdDgtikvWDlr 31
           f ++ ++l+ +++Dg ik+WD+ 
   Q: 13   FsPSgDFLAISAGDGRIKIWDTL 35
           564558899999*********75 PP

Organism

Amborella trichopoda

Protein Sequence
(Fasta)

METPNIKELL TSFSPSGDFL AISAGDGRIK IWDTLKGSLQ IEFADINSKT DGMDLSGHSK 60
RGHLSLDYTC MEWMTLGTQK KSLSLVLGTG NGDVLALDVS VGEMKWRVND CHPGGVHAIS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAAACCC CAAATATCAA AGAACTCTTG ACATCATTTA GTCCTTCTGG AGACTTTCTT 60
GCCATAAGTG CAGGAGATGG TCGAATTAAG GTAAAAGAGT TTCCCGACTT AAAGAAATGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04003--Utp12
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005730--C:nucleolus
GO:0006364--P:rRNA processing

KEGG

atr:18431331

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001865	Ailuropoda melanoleuca	21.10	4.00e-24	105.00
IUUC-Apl-003242	Anas platyrhynchos	21.10	1.00e-24	106.00
IUUC-Aca-004607	Anolis carolinensis	20.37	2.00e-26	112.00
IUUC-Aly-006074	Arabidopsis lyrata	43.23	3.00e-122	431.00
IUUC-Ath-007222	Arabidopsis thaliana	42.36	9.00e-119	419.00
IUUC-Ame-011014	Astyanax mexicanus	23.51	4.00e-20	92.00
IUUC-Bta-012605	Bos taurus	20.42	3.00e-24	105.00
IUUC-Bdi-014072	Brachypodium distachyon	44.44	6.00e-130	456.00
IUUC-Bol-016255	Brassica oleracea	45.70	3.00e-145	507.00
IUUC-Bra-016850	Brassica rapa	46.79	3.00e-147	514.00
IUUC-Cja-019620	Callithrix jacchus	20.48	6.00e-24	104.00
IUUC-Cfa-020520	Canis familiaris	20.32	8.00e-23	100.00
IUUC-Cpo-022456	Cavia porcellus	24.90	2.00e-19	89.70
IUUC-Cho-024726	Choloepus hoffmanni	21.38	7.00e-21	94.70
IUUC-Cin-025761	Ciona intestinalis	19.11	2.00e-16	79.70
IUUC-Dre-028051	Danio rerio	26.73	3.00e-21	95.50
IUUC-Dno-030031	Dasypus novemcinctus	21.61	1.00e-23	103.00
IUUC-Dme-031653	Drosophila melanogaster	19.87	1.00e-16	80.50
IUUC-Ete-032863	Echinops telfairi	27.00	8.00e-08	51.20
IUUC-Eca-033243	Equus caballus	19.63	3.00e-17	82.40
IUUC-Eeu-034970	Erinaceus europaeus	21.00	8.00e-11	61.20
IUUC-Fca-036009	Felis catus	20.32	2.00e-24	106.00
IUUC-Fal-037264	Ficedula albicollis	20.15	2.00e-20	93.20
IUUC-Gmo-039124	Gadus morhua	24.79	2.00e-23	102.00
IUUC-Gga-040862	Gallus gallus	24.80	7.00e-27	114.00
IUUC-Gac-041468	Gasterosteus aculeatus	26.33	2.00e-22	99.80
IUUC-Gma-042795	Glycine max	43.86	5.00e-125	440.00
IUUC-Ggo-044432	Gorilla gorilla	20.65	3.00e-24	105.00
IUUC-Hsa-047036	Homo sapiens	20.48	9.00e-24	104.00
IUUC-Hvu-047736	Hordeum vulgare	27.58	4.00e-24	104.00
IUUC-Itr-048644	Ictidomys tridecemlineatus	20.32	9.00e-21	94.00
IUUC-Lch-049553	Latimeria chalumnae	23.12	3.00e-21	95.90
IUUC-Laf-053462	Loxodonta africana	20.58	1.00e-23	103.00
IUUC-Mcc-055239	Macaca mulatta	20.48	4.00e-24	105.00
IUUC-Mtr-057977	Medicago truncatula	45.41	9.00e-134	469.00
IUUC-Mga-060079	Meleagris gallopavo	23.00	4.00e-20	91.70
IUUC-Mmr-061472	Microcebus murinus	20.32	2.00e-22	99.80
IUUC-Mdo-061972	Monodelphis domestica	20.67	6.00e-26	111.00
IUUC-Mmu-063354	Mus musculus	20.16	7.00e-23	101.00
IUUC-Mac-065064	Musa acuminata	53.85	2.00e-125	441.00
IUUC-Mpu-066877	Mustela putorius furo	20.87	1.00e-23	103.00
IUUC-Mlu-067476	Myotis lucifugus	20.71	1.00e-22	100.00
IUUC-Nle-069119	Nomascus leucogenys	20.65	1.00e-24	106.00
IUUC-Ont-072093	Oreochromis niloticus	23.70	4.00e-32	131.00
IUUC-Oan-072944	Ornithorhynchus anatinus	20.11	1.00e-21	96.70
IUUC-Ocu-074472	Oryctolagus cuniculus	21.61	6.00e-21	94.70
IUUC-Oba-075009	Oryza barthii	44.66	1.00e-121	429.00
IUUC-Ogl-077189	Oryza glaberrima	42.42	4.00e-122	431.00
IUUC-Oin-079064	Oryza indica	44.82	1.00e-121	429.00
IUUC-Opu-083604	Oryza punctata	44.71	1.00e-125	442.00
IUUC-Oru-084620	Oryza rufipogon	44.82	1.00e-121	429.00
IUUC-Osa-085345	Oryza sativa	44.82	4.00e-122	430.00
IUUC-Ola-086626	Oryzias latipes	21.73	3.00e-28	119.00
IUUC-Oga-087911	Otolemur garnettii	21.58	1.00e-23	103.00
IUUC-Ptr-091603	Pan troglodytes	20.48	8.00e-24	104.00
IUUC-Pan-092569	Papio anubis	20.48	4.00e-24	105.00
IUUC-Pma-094287	Petromyzon marinus	22.63	6.00e-26	111.00
IUUC-Ppa-095327	Physcomitrella patens	33.86	4.00e-88	318.00
IUUC-Pfo-097292	Poecilia formosa	23.68	2.00e-24	106.00
IUUC-Pab-097878	Pongo abelii	20.48	8.00e-24	104.00
IUUC-Pop-099418	Populus trichocarpa	46.62	5.00e-142	496.00
IUUC-Pca-100941	Procavia capensis	26.44	2.00e-15	76.30
IUUC-Ppe-101779	Prunus persica	46.37	4.00e-152	530.00
IUUC-Pva-102493	Pteropus vampyrus	26.46	3.00e-15	76.30
IUUC-Rno-105084	Rattus norvegicus	20.16	9.00e-21	94.00
IUUC-Sha-107486	Sarcophilus harrisii	20.45	1.00e-24	107.00
IUUC-Smo-108825	Selaginella moellendorffii	31.83	3.00e-76	278.00
IUUC-Sit-110825	Setaria italica	44.59	2.00e-129	455.00
IUUC-Sly-111365	Solanum lycopersicum	44.41	2.00e-131	461.00
IUUC-Stu-112812	Solanum tuberosum	44.34	9.00e-130	456.00
IUUC-Sar-113326	Sorex araneus	24.90	8.00e-20	90.90
IUUC-Sbi-114426	Sorghum bicolor	44.61	4.00e-136	477.00
IUUC-Tgu-116726	Taeniopygia guttata	22.29	1.00e-28	120.00
IUUC-Tru-117848	Takifugu rubripes	22.17	1.00e-25	110.00
IUUC-Tni-120591	Tetraodon nigroviridis	25.55	5.00e-24	105.00
IUUC-Tca-121576	Theobroma cacao	44.41	3.00e-143	500.00
IUUC-Tae-125648	Triticum aestivum	45.06	7.00e-128	449.00
IUUC-Tbe-127832	Tupaia belangeri	21.83	2.00e-18	85.90
IUUC-Ttr-128812	Tursiops truncatus	21.04	2.00e-20	92.80
IUUC-Xma-133557	Xiphophorus maculatus	23.23	5.00e-25	108.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence