iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114010

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000769

Gene Name

SORBI_010G213200

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb10g025990	Sb10g025990.1	Sb10g025990.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.90e-41	136.9	94	132
UBD/Beta-Prp	9.40e-59	199.8	49	268

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH++ + +l++ +d t ++s+s D+t++vWD+ tg+++k
   Q: 94   GHKNAILDLQWtTDgTQIISASPDKTVRVWDVETGKQVK 132
           8***********889********************9986 PP

UBD/Beta-Prp

   S: 48   lsgheaevtavkfspdgkilvtgseDrtikvwdls.tgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvnc 142
           l gh+++++++kf+p g ++++gs D+ i +w +   +k +++l+gh++ +l+l++  +g  ++s+s d+t+rvwd+etg+ ++   ++h+++vn+
   Q: 49   LTGHQSAIYCMKFNPAGTVIASGSHDKDIFLWYVHgECKNFMVLRGHKNAILDLQWTTDGTQIISASPDKTVRVWDVETGKQVK-KMAEHSSFVNS 143
           79******************************8876899*********************************************.99********* PP
   S: 143  vvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderl 237
            +   +   l+vsGs+D+t +lWdl++   ++tl   ++ +++ +sf++    + +g+ld++vk wdl+++e+ + l+gh+d ++ +++sp++ +l
   Q: 144  CCPARKWpPLVVSGSDDGTAKLWDLRQRGAIQTLP--DKYQITAVSFSEAADKVFTGGLDNDVKWWDLRKNEVTEYLKGHQDMITGMQLSPDGSYL 237
           *****999**************************5..8********************************************************** PP
   S: 238  vsgssDgsiriWdlr....sgdllktlqlhn 264
           ++ ++D+ ++iWdlr     + ++ktl++h+
   Q: 238  LTNAMDNELKIWDLRpyapENRNIKTLTGHQ 268
           *************993333344555666665 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MFSAPGNNSL ALVAPRPGME LANVQHPNQA PGPGGKQRTS SLEAPIMLLT GHQSAIYCMK 60
FNPAGTVIAS GSHDKDIFLW YVHGECKNFM VLRGHKNAIL DLQWTTDGTQ IISASPDKTV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCATTGCCCT GCCGGCCGCC GCCAACCCCA GCCCCCGTTC TCCGGCCCGC CGCGCATTCC 60
TCTCCCTCTC TCGTGGCAAC GACGAGCGAC AAGTCGCTGG CTCGCTGCCG CCCTACGCCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

sbi:SORBI_10g025990

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000138	Aegilops tauschii	94.80	0.00e+00	686.00
IUUC-Aml-001428	Ailuropoda melanoleuca	59.11	2.00e-106	378.00
IUUC-Atr-003164	Amborella trichopoda	78.74	5.00e-162	562.00
IUUC-Apl-003447	Anas platyrhynchos	58.39	1.00e-102	365.00
IUUC-Aca-004270	Anolis carolinensis	55.84	1.00e-107	381.00
IUUC-Aly-005659	Arabidopsis lyrata	78.82	2.00e-164	570.00
IUUC-Ath-006764	Arabidopsis thaliana	78.64	1.00e-163	568.00
IUUC-Acl-008324	Aspergillus clavatus	47.23	4.00e-88	317.00
IUUC-Afl-008607	Aspergillus flavus	45.64	4.00e-82	296.00
IUUC-Afu-008998	Aspergillus fumigatus	47.23	5.00e-88	317.00
IUUC-Ani-009363	Aspergillus nidulans	47.23	2.00e-88	317.00
IUUC-Ang-009513	Aspergillus niger	43.23	8.00e-79	286.00
IUUC-Aor-010237	Aspergillus oryzae	46.91	3.00e-87	314.00
IUUC-Ate-010374	Aspergillus terreus	43.32	9.00e-76	276.00
IUUC-Ame-010728	Astyanax mexicanus	54.30	4.00e-110	390.00
IUUC-Bgr-012297	Blumeria graminis	42.80	3.00e-63	234.00
IUUC-Bta-012433	Bos taurus	58.82	5.00e-112	396.00
IUUC-Bci-013763	Botrytis cinerea	43.32	1.00e-83	302.00
IUUC-Bdi-014490	Brachypodium distachyon	96.22	0.00e+00	696.00
IUUC-Bol-016479	Brassica oleracea	81.88	7.00e-158	548.00
IUUC-Bra-017219	Brassica rapa	78.47	1.00e-161	561.00
IUUC-Cel-018512	Caenorhabditis elegans	48.50	1.00e-103	368.00
IUUC-Cja-019308	Callithrix jacchus	58.82	5.00e-112	396.00
IUUC-Cfa-020998	Canis familiaris	58.82	8.00e-112	395.00
IUUC-Cpo-021580	Cavia porcellus	58.82	6.00e-112	396.00
IUUC-Cre-022859	Chlamydomonas reinhardtii	53.66	5.00e-112	396.00
IUUC-Csa-023456	Chlorocebus sabaeus	58.82	6.00e-112	396.00
IUUC-Cho-024644	Choloepus hoffmanni	58.58	2.00e-112	397.00
IUUC-Cin-025463	Ciona intestinalis	52.94	3.00e-108	384.00
IUUC-Cgl-026497	Colletotrichum gloeosporioides	45.93	2.00e-86	311.00
IUUC-Cne-026780	Cryptococcus neoformans	38.17	3.00e-59	221.00
IUUC-Dre-027671	Danio rerio	55.66	7.00e-115	405.00
IUUC-Dno-029769	Dasypus novemcinctus	58.39	4.00e-112	397.00
IUUC-Dse-031316	Dothistroma septosporum	41.48	6.00e-79	286.00
IUUC-Dme-031756	Drosophila melanogaster	49.56	1.00e-103	368.00
IUUC-Ete-032753	Echinops telfairi	54.58	2.00e-95	341.00
IUUC-Eca-033979	Equus caballus	58.82	5.00e-112	396.00
IUUC-Eeu-034862	Erinaceus europaeus	64.96	8.00e-49	186.00
IUUC-Fca-036110	Felis catus	56.03	1.00e-87	315.00
IUUC-Fal-037648	Ficedula albicollis	57.14	7.00e-113	399.00
IUUC-Fox-037861	Fusarium oxysporum	42.02	4.00e-81	293.00
IUUC-Fso-038405	Fusarium solani	42.35	6.00e-82	296.00
IUUC-Gmo-039383	Gadus morhua	55.16	1.00e-110	392.00
IUUC-Ggr-040082	Gaeumannomyces graminis	39.88	2.00e-76	278.00
IUUC-Gga-040785	Gallus gallus	58.58	1.00e-111	395.00
IUUC-Gac-041645	Gasterosteus aculeatus	56.31	4.00e-108	384.00
IUUC-Gma-044329	Glycine max	79.07	4.00e-167	579.00
IUUC-Ggo-044800	Gorilla gorilla	54.39	7.00e-92	329.00
IUUC-Hsa-045918	Homo sapiens	58.82	6.00e-112	396.00
IUUC-Hvu-047342	Hordeum vulgare	94.51	0.00e+00	684.00
IUUC-Itr-048047	Ictidomys tridecemlineatus	54.17	2.00e-57	214.00
IUUC-Kpa-049149	Komagataella pastoris	29.13	3.00e-31	128.00
IUUC-Lch-050395	Latimeria chalumnae	57.28	6.00e-118	416.00
IUUC-Lpe-051275	Leersia perrieri	96.51	0.00e+00	704.00
IUUC-Loc-052666	Lepisosteus oculatus	52.65	2.00e-104	371.00
IUUC-Lma-053129	Leptosphaeria maculans	42.62	1.00e-80	292.00
IUUC-Laf-054512	Loxodonta africana	58.82	6.00e-112	396.00
IUUC-Mcc-055819	Macaca mulatta	58.82	1.00e-111	395.00
IUUC-Meu-056350	Macropus eugenii	53.92	5.00e-96	343.00
IUUC-Mor-057063	Magnaporthe oryzae	44.30	3.00e-82	297.00
IUUC-Mpo-057369	Magnaporthe poae	39.88	4.00e-76	277.00
IUUC-Mtr-058228	Medicago truncatula	76.88	1.00e-162	565.00
IUUC-Mla-059093	Melampsora laricipopulina	42.50	9.00e-68	249.00
IUUC-Mga-059719	Meleagris gallopavo	58.52	4.00e-112	397.00
IUUC-Mvi-060285	Microbotryum violaceum	38.04	1.00e-55	209.00
IUUC-Mmr-061685	Microcebus murinus	54.58	5.00e-97	346.00
IUUC-Mdo-062121	Monodelphis domestica	58.50	3.00e-111	394.00
IUUC-Mmu-063216	Mus musculus	57.74	8.00e-112	395.00
IUUC-Mac-065463	Musa acuminata	78.61	3.00e-163	566.00
IUUC-Mpu-066390	Mustela putorius furo	58.39	3.00e-112	397.00
IUUC-Mlu-066932	Myotis lucifugus	59.11	2.00e-106	378.00
IUUC-Nfi-068509	Neosartorya fischeri	46.91	2.00e-87	315.00
IUUC-Ncr-068870	Neurospora crassa	45.93	2.00e-85	308.00
IUUC-Nle-069539	Nomascus leucogenys	58.82	8.00e-112	396.00
IUUC-Opr-070555	Ochotona princeps	50.98	2.00e-98	351.00
IUUC-Ont-071490	Oreochromis niloticus	55.52	2.00e-108	384.00
IUUC-Oan-073044	Ornithorhynchus anatinus	54.46	3.00e-92	330.00
IUUC-Ocu-073764	Oryctolagus cuniculus	58.39	3.00e-112	397.00
IUUC-Oba-075704	Oryza barthii	97.24	0.00e+00	670.00
IUUC-Obr-076455	Oryza brachyantha	97.09	0.00e+00	704.00
IUUC-Ogl-077382	Oryza glaberrima	96.76	0.00e+00	694.00
IUUC-Ogu-078739	Oryza glumaepatula	97.55	0.00e+00	670.00
IUUC-Oin-079072	Oryza indica	97.55	0.00e+00	670.00
IUUC-Olo-080809	Oryza longistaminata	97.55	0.00e+00	670.00
IUUC-Ome-081677	Oryza meridionalis	97.24	0.00e+00	667.00
IUUC-Oni-082937	Oryza nivara	97.55	0.00e+00	670.00
IUUC-Opu-083510	Oryza punctata	97.55	0.00e+00	670.00
IUUC-Oru-084360	Oryza rufipogon	97.35	0.00e+00	696.00
IUUC-Osa-085640	Oryza sativa	97.35	0.00e+00	696.00
IUUC-Ola-086504	Oryzias latipes	56.96	5.00e-109	386.00
IUUC-Olu-087869	Ostreococcus lucimarinus	41.45	4.00e-67	247.00
IUUC-Oga-088773	Otolemur garnettii	58.82	3.00e-112	397.00
IUUC-Oar-089677	Ovis aries	58.25	2.00e-110	390.00
IUUC-Ptr-090724	Pan troglodytes	58.90	1.00e-106	378.00
IUUC-Pan-092683	Papio anubis	58.82	6.00e-112	396.00
IUUC-Psi-093415	Pelodiscus sinensis	58.82	1.00e-111	395.00
IUUC-Pma-094562	Petromyzon marinus	56.56	5.00e-116	409.00
IUUC-Pno-095014	Phaeosphaeria nodorum	43.52	1.00e-81	295.00
IUUC-Ppa-095728	Physcomitrella patens	76.38	2.00e-150	523.00
IUUC-Pfo-096579	Poecilia formosa	56.96	8.00e-109	385.00
IUUC-Pab-098313	Pongo abelii	58.82	6.00e-112	396.00
IUUC-Pop-099747	Populus trichocarpa	80.71	9.00e-167	578.00
IUUC-Pca-100871	Procavia capensis	51.25	6.00e-80	289.00
IUUC-Ppe-101389	Prunus persica	79.29	2.00e-164	570.00
IUUC-Pva-102468	Pteropus vampyrus	48.69	1.00e-83	302.00
IUUC-Pgr-103523	Puccinia graminis	39.20	2.00e-70	258.00
IUUC-Ptt-103930	Puccinia triticina	40.75	2.00e-69	254.00
IUUC-Pte-104299	Pyrenophora teres	46.25	2.00e-86	311.00
IUUC-Pyt-104564	Pyrenophora triticirepentis	45.48	8.00e-87	313.00
IUUC-Rno-105796	Rattus norvegicus	58.58	6.00e-112	396.00
IUUC-Sha-107191	Sarcophilus harrisii	58.50	3.00e-111	394.00
IUUC-Sja-107952	Schizosaccharomyces japonicus	38.72	2.00e-63	235.00
IUUC-Spo-108249	Schizosaccharomyces pombe	43.32	9.00e-77	279.00
IUUC-Ssl-108448	Sclerotinia sclerotiorum	43.32	2.00e-83	301.00
IUUC-Sit-110805	Setaria italica	99.13	0.00e+00	712.00
IUUC-Sly-111567	Solanum lycopersicum	80.00	2.00e-158	550.00
IUUC-Stu-112562	Solanum tuberosum	77.74	1.00e-162	564.00
IUUC-Sar-112991	Sorex araneus	61.93	5.00e-80	289.00
IUUC-Sre-114947	Sporisorium reilianum	40.06	3.00e-68	251.00
IUUC-Ssc-115371	Sus scrofa	58.82	5.00e-112	396.00
IUUC-Tgu-117429	Taeniopygia guttata	58.17	2.00e-112	397.00
IUUC-Tru-118081	Takifugu rubripes	56.96	4.00e-109	387.00
IUUC-Tsy-119101	Tarsius syrichta	52.29	2.00e-91	327.00
IUUC-Tni-120532	Tetraodon nigroviridis	55.99	4.00e-108	383.00
IUUC-Tca-121373	Theobroma cacao	79.88	7.00e-164	568.00
IUUC-Tre-122050	Trichoderma reesei	44.63	2.00e-83	301.00
IUUC-Tvi-122394	Trichoderma virens	42.62	2.00e-78	285.00
IUUC-Tae-124661	Triticum aestivum	94.24	0.00e+00	679.00
IUUC-Tme-126998	Tuber melanosporum	48.05	1.00e-85	308.00
IUUC-Tbe-128032	Tupaia belangeri	58.82	7.00e-112	396.00
IUUC-Ttr-129102	Tursiops truncatus	49.02	8.00e-87	312.00
IUUC-Uma-129363	Ustilago maydis	40.68	2.00e-70	258.00
IUUC-Vda-129891	Verticillium dahliae	43.65	2.00e-82	298.00
IUUC-Vpa-130827	Vicugna pacos	58.82	5.00e-112	396.00
IUUC-Vvi-131202	Vitis vinifera	81.10	2.00e-172	597.00
IUUC-Xtr-132769	Xenopus tropicalis	55.45	3.00e-103	367.00
IUUC-Xma-133147	Xiphophorus maculatus	56.63	3.00e-108	384.00
IUUC-Yli-134352	Yarrowia lipolytica	28.57	1.00e-29	122.00
IUUC-Zma-135294	Zea mays	99.08	0.00e+00	676.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence