iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Csa-023342

Ensembl Protein ID

ENSCSAP00000005962.1

UniProt Accession

A0A0D9RBH3; A0A0D9RBH3_CHLSB

Genbank Protein ID

ENSCSAP00000005962

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AQIB01033707

Gene Name

TRIM54

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCSAG00000009712.1	ENSCSAT00000007794.1	ENSCSAP00000005962.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.40e-09	37.5	26	82

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkw...........pglknssskefrCPlCr 46
           C+iCle+f++++++lpC+H  +++C + +                ss ++frCP Cr
   Q: 26   CPICLEMFSKPVVILPCQHNLCRKCANDVfqasnplwqsrGSTTVSSGGRFRCPSCR 82
           *************************87777777888899977777899********8 PP

Organism

Chlorocebus sabaeus

Protein Sequence
(Fasta)

MNFTVGFKPL LGDAHSMDNL EKQLICPICL EMFSKPVVIL PCQHNLCRKC ANDVFQASNP 60
LWQSRGSTTV SSGGRFRCPS CRHEVVLDRH GVYGLQRNLL VENIIDIYKQ ESSRPLHSKA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGAGGAGCCT TCAGAGTGAG AGGGCAGCAC CTTTGCTGAC CCACCTTTCA CTGTAAGCAG 60
TGGCGCTTGC CCCTGCCCTT GCTCAGGGGA GTCACCCATT CCTGAGTGAG TCAGGGTCAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR017903--COS_domain
IPR033492--TRIM54
IPR027370--Znf-RING_LisH
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51262--COS
PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00643--zf-B_box
PF13445--zf-RING_UBOX

SMART

SM00336--BBOX
SM00184--RING

Gene Ontology

GO:0005874--C:microtubule
GO:0005875--C:microtubule associated complex
GO:0008270--F:zinc ion binding
GO:0055001--P:muscle cell development
GO:0007026--P:negative regulation of microtubule depolymerization

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002282	Ailuropoda melanoleuca	98.18	6.00e-134	469.00
IUUC-Bta-013385	Bos taurus	97.30	8.00e-177	612.00
IUUC-Cja-019697	Callithrix jacchus	80.00	2.00e-142	498.00
IUUC-Cfa-020995	Canis familiaris	98.78	1.00e-169	588.00
IUUC-Cpo-021913	Cavia porcellus	97.22	0.00e+00	677.00
IUUC-Cin-025224	Ciona intestinalis	52.09	2.00e-94	339.00
IUUC-Csv-026374	Ciona savignyi	51.96	6.00e-82	296.00
IUUC-Dre-027562	Danio rerio	68.08	1.00e-145	509.00
IUUC-Dno-029582	Dasypus novemcinctus	98.48	5.00e-172	597.00
IUUC-Dor-031139	Dipodomys ordii	95.82	0.00e+00	644.00
IUUC-Ete-032346	Echinops telfairi	99.51	2.00e-109	388.00
IUUC-Eca-033645	Equus caballus	97.90	2.00e-178	617.00
IUUC-Eeu-035333	Erinaceus europaeus	69.12	8.00e-116	409.00
IUUC-Fca-035865	Felis catus	98.18	0.00e+00	629.00
IUUC-Fal-036978	Ficedula albicollis	81.21	5.00e-167	580.00
IUUC-Gga-040452	Gallus gallus	78.53	2.00e-161	561.00
IUUC-Ggo-044467	Gorilla gorilla	87.31	5.00e-175	606.00
IUUC-Hsa-046379	Homo sapiens	96.94	3.00e-180	624.00
IUUC-Itr-047912	Ictidomys tridecemlineatus	97.49	0.00e+00	634.00
IUUC-Lch-050029	Latimeria chalumnae	78.18	1.00e-153	535.00
IUUC-Loc-051801	Lepisosteus oculatus	80.97	4.00e-136	476.00
IUUC-Laf-054215	Loxodonta africana	97.22	0.00e+00	669.00
IUUC-Mcc-055027	Macaca mulatta	89.30	0.00e+00	645.00
IUUC-Meu-056412	Macropus eugenii	94.94	3.00e-168	583.00
IUUC-Mmr-060920	Microcebus murinus	98.06	0.00e+00	668.00
IUUC-Mdo-062832	Monodelphis domestica	96.36	2.00e-165	575.00
IUUC-Mmu-063707	Mus musculus	95.28	7.00e-178	616.00
IUUC-Mlu-067653	Myotis lucifugus	81.85	3.00e-139	487.00
IUUC-Nle-069020	Nomascus leucogenys	98.89	0.00e+00	652.00
IUUC-Opr-070577	Ochotona princeps	79.51	2.00e-144	504.00
IUUC-Ont-072491	Oreochromis niloticus	62.25	8.00e-121	426.00
IUUC-Oan-073101	Ornithorhynchus anatinus	95.74	2.00e-172	598.00
IUUC-Ocu-074454	Oryctolagus cuniculus	96.94	0.00e+00	631.00
IUUC-Oga-088361	Otolemur garnettii	98.57	6.00e-177	613.00
IUUC-Oar-089950	Ovis aries	81.08	1.00e-139	488.00
IUUC-Ptr-090785	Pan troglodytes	87.06	2.00e-174	605.00
IUUC-Pan-092344	Papio anubis	99.72	0.00e+00	665.00
IUUC-Pab-098322	Pongo abelii	95.56	2.00e-178	618.00
IUUC-Pca-100385	Procavia capensis	76.10	5.00e-122	430.00
IUUC-Rno-105134	Rattus norvegicus	95.28	0.00e+00	680.00
IUUC-Sha-106768	Sarcophilus harrisii	96.06	2.00e-178	617.00
IUUC-Tgu-117494	Taeniopygia guttata	80.12	3.00e-158	550.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence