iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114658

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000763

Gene Name

SORBI_004G187600

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb04g023600	Sb04g023600.1	Sb04g023600.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.40e-09	37.5	131	173

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl+ f+dg  +++lp C H+fh dC+  w         +++CPlCr
   Q: 131  CAVCLTAFDDGdeLRLLPqCSHAFHPDCIDPW------LEDHITCPLCR 173
           ********55555999****************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MAIPNARRPN PLAALYLLLA VVGAFNTVTA QAQVPPPPQL QLLSETTGRT VPTTVITVAA 60
IVFFVLVLFC VLINQWRRSS SSADADASAG GWQASIRWRR RGLDPAAVAL LPILPYAEIR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCATCC CGAACGCGAG GCGGCCAAAC CCACTTGCCG CCCTCTATCT CCTCCTCGCC 60
GTCGTAGGTG CTTTCAACAC GGTCACCGCA CAGGCACAGG TGCCTCCACC ACCGCAGCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0732--Signal
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_04g023600

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000694	Aegilops tauschii	74.60	6.00e-26	110.00
IUUC-Apl-003222	Anas platyrhynchos	56.52	1.00e-12	67.80
IUUC-Bdi-014837	Brachypodium distachyon	56.05	9.00e-39	153.00
IUUC-Cin-025569	Ciona intestinalis	54.35	5.00e-13	68.60
IUUC-Csv-025869	Ciona savignyi	52.17	3.00e-12	66.20
IUUC-Ete-032463	Echinops telfairi	40.00	5.00e-14	71.20
IUUC-Fal-037463	Ficedula albicollis	54.76	1.00e-09	57.80
IUUC-Gga-040209	Gallus gallus	56.52	2.00e-12	67.40
IUUC-Lch-050560	Latimeria chalumnae	44.00	4.00e-14	70.90
IUUC-Lpe-050999	Leersia perrieri	55.28	1.00e-54	206.00
IUUC-Oba-075308	Oryza barthii	49.81	3.00e-36	145.00
IUUC-Obr-076367	Oryza brachyantha	47.47	8.00e-48	183.00
IUUC-Ogl-077034	Oryza glaberrima	85.48	4.00e-29	120.00
IUUC-Ogu-078680	Oryza glumaepatula	85.48	3.00e-29	121.00
IUUC-Oin-079182	Oryza indica	85.48	4.00e-29	120.00
IUUC-Ome-081485	Oryza meridionalis	83.95	2.00e-31	128.00
IUUC-Oni-082249	Oryza nivara	85.48	5.00e-29	120.00
IUUC-Opu-083993	Oryza punctata	50.00	8.00e-42	163.00
IUUC-Oru-084953	Oryza rufipogon	85.48	4.00e-29	121.00
IUUC-Osa-085734	Oryza sativa	85.48	4.00e-29	121.00
IUUC-Pma-094718	Petromyzon marinus	39.78	7.00e-13	67.00
IUUC-Pfo-097029	Poecilia formosa	38.46	3.00e-13	68.90
IUUC-Sit-109945	Setaria italica	87.95	3.00e-36	144.00
IUUC-Tae-125061	Triticum aestivum	51.95	6.00e-39	153.00
IUUC-Tur-126779	Triticum urartu	41.50	1.00e-39	155.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence