iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000099846.1	ENSDART00000162371.1	ENSDARP00000141972.1
ENSDARG00000099846.1	ENSDART00000164748.1	ENSDARP00000130559.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.30e-22	79.8	142	173

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtc.lafsdtllvsGsdDgtikvWDlrt 32
           gH+d +tc +a  d+l++sGs+D t+kvW + t
   Q: 142  GHSDIITCaVAV-DNLVISGSRDTTVKVWHVPT 173
           8*******6666.89**************9876 PP

Organism

Danio rerio

Protein Sequence
(Fasta)

MGEVRKLQKK LRQIENLEIK ISLTPEEKIK VSKKAELRSR LAELLLQLSG PQQTQGIVGK 60
EEDKMKRQVE EVTEQHVGHR PALKIAREER RENEASDGNQ TDGRGETNLP VSLTEEEQED 120

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Nucleotide Sequence
(Fasta)

ACTGATTTCC GGCTGATGAG GTCTGTGTGT GTTACACGTC TGCATACTGT ATCCGCGAGT 60
GTAGTCTGTA GTAAAACAAC AACAAACCCT TATCCATACT TTCCACCGTG GATTAAACTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ame-011444	Astyanax mexicanus	54.77	6.00e-122	431.00
IUUC-Cin-025312	Ciona intestinalis	26.96	2.00e-34	140.00
IUUC-Gmo-039566	Gadus morhua	63.45	1.00e-175	609.00
IUUC-Gac-041397	Gasterosteus aculeatus	63.81	4.00e-176	611.00
IUUC-Loc-052057	Lepisosteus oculatus	54.89	2.00e-131	462.00
IUUC-Ont-071454	Oreochromis niloticus	64.43	0.00e+00	641.00
IUUC-Ola-087477	Oryzias latipes	61.56	1.00e-159	556.00
IUUC-Pfo-096379	Poecilia formosa	64.10	0.00e+00	632.00
IUUC-Tru-118555	Takifugu rubripes	62.67	0.00e+00	632.00
IUUC-Tni-119841	Tetraodon nigroviridis	62.29	6.00e-164	570.00
IUUC-Xtr-131952	Xenopus tropicalis	31.96	6.00e-59	221.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence