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Tag Content
iUUCD ID IUUC-Tur-125983
Ensembl Protein ID TRIUR3_01704-P1
UniProt Accession M7YJI5; M7YJI5_TRIUA
Genbank Protein ID EMS47001.1
Protein Name U4/U6 small nuclear ribonucleoprotein PRP4-like protein
Genbank Nucleotide ID KD266621
Gene Name TRIUR3_01704
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
TRIUR3_01704 TRIUR3_01704-T1 TRIUR3_01704-P1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 6.80e-40 134.1 172 208
UBD/Beta-Prp 1.70e-66 225.2 49 269
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
    gH+ sv++++f +d l +s++ D + +vWDlr+g+l
   Q: 172 GHSRSVYGVSFhPDgSLAASCGFDASARVWDLRSGRL 208
    8***********998999*****************97 PP
   


   UBD/Beta-Prp

   S: 10   ksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfs 103
    + ++t fs+d s+lat+s++g +kvw++ + + +++l+gh++ t+v fsp ++ l+t+s D+t+k+w+ +g+ ++++ gh d++ l+f+
   Q: 49 DRPLTGCSFSRDASMLATSSWSGIVKVWSLPQITRIATLKGHTERATDVAFSPVDNCLATASADKTAKLWNS-DGSLLMSFDGHLDRLARLAFH 141
    7799999***************************************************************96.689****************** PP
   S: 104 psgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvs 197
    psg++l ++s d+t r+wd++tg++l +++gh+++v +v++hpdg+l +s++ D r+Wdl++g+l tl g h ++v ++f++ng +++
   Q: 142 PSGKYLGTASFDKTWRLWDINTGTELL-LQEGHSRSVYGVSFHPDGSLAASCGFDASARVWDLRSGRLYCTLIG-HVKPVLGVTFSPNGHLVAT 233
    ***************************.*********************************************9.******************* PP
   S: 198 gsldgtvklwdlqtgecvrtlnghtdnvksvrfspn 233
    +s+d+ ++wdl+t +++++ +h++ ++ v+f p+
   Q: 234 VSEDNFCRIWDLRTRQMLYSIPAHKSLISHVKFEPQ 269
    ********************************9976 PP
   

Organism Triticum urartu
Protein Sequence
(Fasta)
MYSLPRAKAR VERAKRRLAD PDEDPEAEAA LVVKQAADFA LERSEIGDDR PLTGCSFSRD 60
ASMLATSSWS GIVKVWSLPQ ITRIATLKGH TERATDVAFS PVDNCLATAS ADKTAKLWNS 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Tur-125983|E3,WD_repeat;UBD,Beta-Prp|Triticum urartu
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGTACTCAC TGCCCCGCGC CAAGGCCAGG GTCGAGAGGG CCAAGCGACG CCTCGCCGAC 60
CCCGACGAGG ACCCCGAGGC AGAGGCCGCC CTTGTCGTGA AGCAGGCGGC GGATTTCGCG 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Tur-125983|E3,WD_repeat;UBD,Beta-Prp|Triticum urartu
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0687--Ribonucleoprotein
KW-0543--Viral nucleoprotein
KW-0946--Virion
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0030529--C:intracellular ribonucleoprotein complex
GO:0019013--C:viral nucleocapsid

Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ago-007893 Ashbya gossypii 34.78 2.00e-46 179.00
IUUC-Cel-018632 Caenorhabditis elegans 38.28 5.00e-69 254.00
IUUC-Cre-022716 Chlamydomonas reinhardtii 48.95 8.00e-85 306.00
IUUC-Csa-023139 Chlorocebus sabaeus 44.82 4.00e-85 306.00
IUUC-Cin-025106 Ciona intestinalis 44.38 3.00e-83 301.00
IUUC-Csv-026087 Ciona savignyi 43.20 6.00e-81 293.00
IUUC-Dme-031783 Drosophila melanogaster 45.10 4.00e-76 278.00
IUUC-Gmo-038966 Gadus morhua 47.74 1.00e-76 278.00
IUUC-Gac-042598 Gasterosteus aculeatus 45.97 1.00e-84 306.00
IUUC-Kpa-049369 Komagataella pastoris 35.22 2.00e-50 191.00
IUUC-Lch-050074 Latimeria chalumnae 44.97 8.00e-79 286.00
IUUC-Mpo-057375 Magnaporthe poae 40.64 4.00e-49 186.00
IUUC-Mvi-060372 Microbotryum violaceum 39.59 8.00e-73 266.00
IUUC-Oan-073166 Ornithorhynchus anatinus 45.54 1.00e-86 311.00
IUUC-Olo-080243 Oryza longistaminata 89.10 2.00e-166 577.00
IUUC-Ola-086940 Oryzias latipes 46.61 9.00e-91 326.00
IUUC-Pma-094319 Petromyzon marinus 30.72 4.00e-35 140.00
IUUC-Pfo-096812 Poecilia formosa 41.76 3.00e-72 265.00
IUUC-Pab-097805 Pongo abelii 44.94 1.00e-81 296.00
IUUC-Sce-106418 Saccharomyces cerevisiae 34.51 1.00e-54 206.00
IUUC-Sar-113266 Sorex araneus 47.96 5.00e-84 304.00
IUUC-Tsy-119157 Tarsius syrichta 45.54 2.00e-88 318.00
IUUC-Tae-123761 Triticum aestivum 97.95 0.00e+00 638.00
IUUC-Tme-126951 Tuber melanosporum 38.02 4.00e-67 248.00
IUUC-Tbe-128136 Tupaia belangeri 40.77 5.00e-75 274.00
IUUC-Ttr-129197 Tursiops truncatus 31.43 2.00e-35 142.00
IUUC-Xtr-132612 Xenopus tropicalis 32.74 5.00e-42 164.00
Created Date 25-Jun-2017

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