iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-114441

Ensembl Protein ID

Sb01g014220.1

UniProt Accession

A0A1B6QJ84; A0A1B6QJ84_SORBI

Genbank Protein ID

KXG37983.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000760

Gene Name

SORBI_001G162500

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb01g014220	Sb01g014220.1	Sb01g014220.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UIM	1.30e-06	28.5	75	90
UBD/Alpha-Helix/DUIM	2.6e-05	13.6	41	60

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UIM

   S: 1    dEdeeLqlAlalSlqE 16
           dEde+L++Al++S+++
   Q: 75   DEDEQLARALQESMND 90
           7*************86 PP

UBD/Alpha-Helix/DUIM

   S: 1    dEdeeLqlAlalSlqEeees 20
           +Ede++  A+alSl+Ee+++
   Q: 41   NEDEDMDHAIALSLSEEDQR 60
           59***************986 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MGWLSKIFKG PVNRVSRGHY NGNSHEGYST QHTKSYGAHG NEDEDMDHAI ALSLSEEDQR 60
KGKTIDTGHT GHDLDEDEQL ARALQESMND GPPRQDIPIE DVHPESAPAS SLPSNIFPSS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGTTGGT TGAGTAAAAT ATTTAAAGGT CCAGTAAATA GAGTTTCAAG AGGACACTAC 60
AACGGGAACT CCCATGAAGG CTATTCAACT CAGCACACTA AATCATATGT ACTGCTCAGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR022087--DA1-like
IPR003903--UIM_dom
IPR001781--Znf_LIM

PROSITE

PS00478--LIM_DOMAIN_1
PS50023--LIM_DOMAIN_2
PS50330--UIM

Pfam

PF12315--DA1-like
PF00412--LIM
PF02809--UIM

SMART

SM00132--LIM
SM00726--UIM

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000663	Aegilops tauschii	74.40	0.00e+00	682.00
IUUC-Aca-004462	Anolis carolinensis	27.08	6.00e-03	33.90
IUUC-Ame-011762	Astyanax mexicanus	24.78	3.00e-04	40.00
IUUC-Bta-012469	Bos taurus	27.08	1.20e-02	32.70
IUUC-Cel-018413	Caenorhabditis elegans	32.50	6.00e-04	37.40
IUUC-Cja-019104	Callithrix jacchus	45.83	3.90e-01	30.40
IUUC-Cfa-020384	Canis familiaris	27.08	1.00e-02	33.10
IUUC-Cpo-021667	Cavia porcellus	38.96	4.00e-08	52.80
IUUC-Csa-023039	Chlorocebus sabaeus	27.08	5.00e-03	33.90
IUUC-Cin-025236	Ciona intestinalis	43.75	1.00e-04	39.30
IUUC-Csv-026002	Ciona savignyi	36.11	4.00e-04	37.70
IUUC-Dno-029750	Dasypus novemcinctus	41.67	1.60e+00	28.50
IUUC-Dor-031109	Dipodomys ordii	45.83	3.20e-01	30.80
IUUC-Ete-032660	Echinops telfairi	37.14	1.20e+00	28.90
IUUC-Eca-033433	Equus caballus	41.67	1.90e+00	28.50
IUUC-Fal-037626	Ficedula albicollis	38.96	4.00e-08	52.40
IUUC-Gac-041929	Gasterosteus aculeatus	29.17	1.00e-03	36.20
IUUC-Ggo-044835	Gorilla gorilla	27.08	4.00e-03	34.30
IUUC-Hsa-046825	Homo sapiens	27.08	5.00e-03	33.90
IUUC-Hvu-047551	Hordeum vulgare	73.17	0.00e+00	728.00
IUUC-Lpe-050758	Leersia perrieri	74.80	0.00e+00	725.00
IUUC-Laf-053578	Loxodonta africana	27.08	3.00e-03	34.70
IUUC-Mcc-055650	Macaca mulatta	27.08	5.00e-03	33.90
IUUC-Meu-056420	Macropus eugenii	45.83	3.10e-01	30.80
IUUC-Mmr-060595	Microcebus murinus	38.96	2.00e-08	53.50
IUUC-Mdo-062935	Monodelphis domestica	27.52	4.00e-03	34.70
IUUC-Mmu-063980	Mus musculus	50.00	4.50e-02	33.90
IUUC-Mpu-066114	Mustela putorius furo	27.16	8.00e-05	40.00
IUUC-Mlu-068217	Myotis lucifugus	27.08	6.00e-03	33.50
IUUC-Ncr-068674	Neurospora crassa	31.94	8.00e-04	38.90
IUUC-Nle-069343	Nomascus leucogenys	45.83	3.30e-01	30.80
IUUC-Opr-070892	Ochotona princeps	27.08	5.00e-03	33.90
IUUC-Ont-071811	Oreochromis niloticus	29.17	6.00e-04	37.00
IUUC-Oba-075707	Oryza barthii	74.75	0.00e+00	719.00
IUUC-Obr-076584	Oryza brachyantha	80.24	0.00e+00	801.00
IUUC-Ogl-077035	Oryza glaberrima	79.02	0.00e+00	780.00
IUUC-Ogu-078055	Oryza glumaepatula	74.75	0.00e+00	719.00
IUUC-Oin-079541	Oryza indica	79.25	0.00e+00	725.00
IUUC-Oni-082309	Oryza nivara	74.95	0.00e+00	721.00
IUUC-Opu-083196	Oryza punctata	75.36	0.00e+00	740.00
IUUC-Oru-085213	Oryza rufipogon	74.95	0.00e+00	721.00
IUUC-Osa-085464	Oryza sativa	79.23	0.00e+00	783.00
IUUC-Oga-088707	Otolemur garnettii	27.08	5.00e-03	33.90
IUUC-Oar-089771	Ovis aries	27.08	5.00e-03	33.90
IUUC-Ptr-091237	Pan troglodytes	27.08	5.00e-03	33.90
IUUC-Pan-092656	Papio anubis	27.08	5.00e-03	33.90
IUUC-Pno-094933	Phaeosphaeria nodorum	30.11	1.40e-02	34.30
IUUC-Pfo-097294	Poecilia formosa	37.84	3.00e-09	56.20
IUUC-Pab-098372	Pongo abelii	23.02	3.00e-04	40.00
IUUC-Pva-102270	Pteropus vampyrus	27.08	5.00e-03	33.90
IUUC-Ptt-104003	Puccinia triticina	36.00	5.00e-03	35.00
IUUC-Pte-104256	Pyrenophora teres	29.79	2.00e-03	37.40
IUUC-Rno-105908	Rattus norvegicus	50.00	4.70e-02	33.50
IUUC-Sha-107509	Sarcophilus harrisii	45.83	2.30e-01	31.20
IUUC-Sar-113038	Sorex araneus	37.50	5.20e-02	32.30
IUUC-Ssc-116398	Sus scrofa	23.02	3.00e-04	40.00
IUUC-Tgu-116824	Taeniopygia guttata	38.96	7.00e-08	51.20
IUUC-Tru-118213	Takifugu rubripes	29.17	8.00e-04	36.60
IUUC-Tni-120676	Tetraodon nigroviridis	29.17	9.00e-04	36.20
IUUC-Tae-125727	Triticum aestivum	73.78	0.00e+00	728.00
IUUC-Tur-126326	Triticum urartu	73.73	0.00e+00	728.00
IUUC-Tbe-127395	Tupaia belangeri	31.58	1.00e-07	50.40
IUUC-Ttr-129096	Tursiops truncatus	45.83	2.00e-01	31.60
IUUC-Uma-129653	Ustilago maydis	42.59	5.00e-09	56.20
IUUC-Vpa-130784	Vicugna pacos	37.66	9.00e-08	51.20
IUUC-Xtr-131827	Xenopus tropicalis	28.33	4.00e-03	34.30

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence