iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bdi-014860

Ensembl Protein ID

BRADI3G13280.1

UniProt Accession

I1I0C4; I1I0C4_BRADI

Genbank Protein ID

KQJ94798.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000882

Gene Name

LOC100828910; BRADI_3g13280

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI3G13280	BRADI3G13280.1	BRADI3G13280.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.60e-22	78.5	111	141

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           H  +v +l++ sd  +lvs+s D+++ +WD 
   Q: 111  HRKDVLDLQWsSDgSFLVSASVDNSCIIWDA 141
           8889*******9999***************5 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MRGGTVQINW HDQQPVLTLD FHPASRRLAT GGGDHDIKIW AIASDDSDQK LPSASYVSSL 60
SAHSSAVNVL RFSPSGENLA SGADGGGITL WKLHTTDDGE AWKVHRSLLF HRKDVLDLQW 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATCCCCTCCA TTTTCCCGCC TTCTTCCCAA ACCCTAGCCC TCAGCTCGCC TCGGAGGCGA 60
CTCGATTCGG ACGAAGAGGA CGCCACCGGT GGGACGATGC GGGGCGGCAC GGTGCAGATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR001632--Gprotein_B
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00319--GPROTEINB

SMART

SM00320--WD40

Gene Ontology

GO:0033186--C:CAF-1 complex
GO:0005634--C:nucleus
GO:0042393--F:histone binding
GO:0008283--P:cell proliferation
GO:0000724--P:double-strand break repair via homologous recombination
GO:0031507--P:heterochromatin assembly
GO:0048366--P:leaf development
GO:0009933--P:meristem structural organization
GO:0006334--P:nucleosome assembly
GO:0009555--P:pollen development
GO:0010026--P:trichome differentiation

KEGG

bdi:100828910

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000474	Aegilops tauschii	85.69	0.00e+00	860.00
IUUC-Aml-001755	Ailuropoda melanoleuca	42.01	7.00e-87	313.00
IUUC-Atr-002674	Amborella trichopoda	56.69	2.00e-160	557.00
IUUC-Apl-003701	Anas platyrhynchos	37.34	4.00e-90	324.00
IUUC-Aca-004692	Anolis carolinensis	41.83	2.00e-90	325.00
IUUC-Aly-006286	Arabidopsis lyrata	55.97	8.00e-165	572.00
IUUC-Ath-007683	Arabidopsis thaliana	55.77	2.00e-164	570.00
IUUC-Ago-007940	Ashbya gossypii	35.71	6.00e-63	234.00
IUUC-Afl-008414	Aspergillus flavus	40.61	2.00e-40	159.00
IUUC-Ani-009399	Aspergillus nidulans	39.09	3.00e-38	152.00
IUUC-Aor-009937	Aspergillus oryzae	40.61	2.00e-40	159.00
IUUC-Ame-011094	Astyanax mexicanus	40.95	3.00e-90	325.00
IUUC-Bta-013423	Bos taurus	41.46	3.00e-87	315.00
IUUC-Bol-016603	Brassica oleracea	55.90	3.00e-160	557.00
IUUC-Bra-017175	Brassica rapa	56.61	5.00e-157	546.00
IUUC-Cel-018272	Caenorhabditis elegans	29.37	2.00e-40	159.00
IUUC-Cja-019558	Callithrix jacchus	42.00	8.00e-89	320.00
IUUC-Cfa-020900	Canis familiaris	41.40	7.00e-86	310.00
IUUC-Cpo-022054	Cavia porcellus	40.37	3.00e-76	278.00
IUUC-Csa-023850	Chlorocebus sabaeus	42.82	3.00e-90	325.00
IUUC-Cho-024510	Choloepus hoffmanni	33.99	1.00e-43	169.00
IUUC-Cin-025178	Ciona intestinalis	37.19	1.00e-76	280.00
IUUC-Cme-027136	Cyanidioschyzon merolae	33.13	2.00e-63	235.00
IUUC-Dre-027879	Danio rerio	40.59	5.00e-90	324.00
IUUC-Dno-029335	Dasypus novemcinctus	41.58	2.00e-89	322.00
IUUC-Dor-030520	Dipodomys ordii	31.06	2.00e-54	206.00
IUUC-Dme-031838	Drosophila melanogaster	39.05	5.00e-81	295.00
IUUC-Eca-033563	Equus caballus	39.75	7.00e-90	323.00
IUUC-Fca-036052	Felis catus	42.08	1.00e-88	319.00
IUUC-Fal-037080	Ficedula albicollis	42.57	8.00e-92	330.00
IUUC-Gmo-039461	Gadus morhua	41.59	1.00e-70	258.00
IUUC-Gga-041133	Gallus gallus	42.08	1.00e-90	326.00
IUUC-Gac-041769	Gasterosteus aculeatus	38.48	2.00e-89	322.00
IUUC-Gma-043339	Glycine max	65.58	1.00e-158	551.00
IUUC-Ggo-044561	Gorilla gorilla	41.81	6.00e-90	324.00
IUUC-Hsa-046150	Homo sapiens	41.51	5.00e-90	324.00
IUUC-Hvu-047792	Hordeum vulgare	90.41	1.00e-145	507.00
IUUC-Itr-048630	Ictidomys tridecemlineatus	42.08	8.00e-90	323.00
IUUC-Kpa-049397	Komagataella pastoris	37.18	3.00e-68	251.00
IUUC-Lch-050365	Latimeria chalumnae	34.89	2.00e-57	216.00
IUUC-Lpe-050875	Leersia perrieri	80.20	0.00e+00	821.00
IUUC-Loc-052770	Lepisosteus oculatus	41.69	2.00e-92	332.00
IUUC-Laf-053505	Loxodonta africana	42.33	4.00e-90	324.00
IUUC-Mcc-054803	Macaca mulatta	42.82	4.00e-90	324.00
IUUC-Meu-056578	Macropus eugenii	41.75	2.00e-39	155.00
IUUC-Mtr-058066	Medicago truncatula	62.80	6.00e-158	550.00
IUUC-Mga-059735	Meleagris gallopavo	40.30	1.00e-91	330.00
IUUC-Mmr-061343	Microcebus murinus	37.43	5.00e-90	324.00
IUUC-Mdo-062065	Monodelphis domestica	37.52	4.00e-90	324.00
IUUC-Mmu-063501	Mus musculus	42.33	1.00e-87	316.00
IUUC-Mac-064864	Musa acuminata	68.46	4.00e-173	600.00
IUUC-Mpu-066549	Mustela putorius furo	42.22	2.00e-90	325.00
IUUC-Mlu-067121	Myotis lucifugus	42.39	2.00e-88	318.00
IUUC-Nfi-068462	Neosartorya fischeri	40.10	5.00e-40	158.00
IUUC-Nle-069854	Nomascus leucogenys	42.07	2.00e-89	322.00
IUUC-Opr-070803	Ochotona princeps	36.19	1.00e-76	280.00
IUUC-Ont-071642	Oreochromis niloticus	40.44	1.00e-90	326.00
IUUC-Oan-073675	Ornithorhynchus anatinus	42.43	1.00e-91	330.00
IUUC-Ocu-073863	Oryctolagus cuniculus	42.03	3.00e-87	314.00
IUUC-Oba-075682	Oryza barthii	79.01	0.00e+00	800.00
IUUC-Obr-076039	Oryza brachyantha	80.40	0.00e+00	798.00
IUUC-Ogu-078021	Oryza glumaepatula	80.99	0.00e+00	826.00
IUUC-Oin-079908	Oryza indica	68.31	0.00e+00	675.00
IUUC-Olo-081063	Oryza longistaminata	80.59	0.00e+00	822.00
IUUC-Ome-081930	Oryza meridionalis	80.59	0.00e+00	820.00
IUUC-Oni-082547	Oryza nivara	80.59	0.00e+00	822.00
IUUC-Opu-084089	Oryza punctata	79.59	0.00e+00	805.00
IUUC-Oru-084844	Oryza rufipogon	80.79	0.00e+00	825.00
IUUC-Osa-085582	Oryza sativa	80.79	0.00e+00	825.00
IUUC-Ola-087187	Oryzias latipes	41.83	5.00e-91	327.00
IUUC-Olu-087792	Ostreococcus lucimarinus	38.07	3.00e-75	275.00
IUUC-Oga-088390	Otolemur garnettii	42.07	4.00e-88	318.00
IUUC-Oar-089740	Ovis aries	40.28	9.00e-83	300.00
IUUC-Ptr-091581	Pan troglodytes	41.51	5.00e-90	324.00
IUUC-Pan-092258	Papio anubis	38.97	9.00e-77	280.00
IUUC-Psi-093761	Pelodiscus sinensis	41.34	1.00e-90	326.00
IUUC-Ppa-095428	Physcomitrella patens	52.81	2.00e-119	422.00
IUUC-Pfo-097357	Poecilia formosa	40.92	4.00e-92	331.00
IUUC-Pab-098520	Pongo abelii	42.07	3.00e-89	321.00
IUUC-Pop-099331	Populus trichocarpa	70.37	2.00e-165	574.00
IUUC-Ppe-101548	Prunus persica	55.73	1.00e-167	582.00
IUUC-Pva-103243	Pteropus vampyrus	42.54	1.00e-80	293.00
IUUC-Rno-105202	Rattus norvegicus	41.83	6.00e-88	317.00
IUUC-Sce-106250	Saccharomyces cerevisiae	33.18	1.00e-64	239.00
IUUC-Sha-107036	Sarcophilus harrisii	37.14	5.00e-91	327.00
IUUC-Sja-107912	Schizosaccharomyces japonicus	36.52	3.00e-72	265.00
IUUC-Spo-108050	Schizosaccharomyces pombe	34.75	5.00e-68	251.00
IUUC-Ssl-108607	Sclerotinia sclerotiorum	37.95	1.00e-36	147.00
IUUC-Sit-109838	Setaria italica	78.11	0.00e+00	816.00
IUUC-Sly-110872	Solanum lycopersicum	63.03	8.00e-161	559.00
IUUC-Stu-111933	Solanum tuberosum	60.40	1.00e-159	555.00
IUUC-Sbi-114587	Sorghum bicolor	75.74	0.00e+00	785.00
IUUC-Ssc-115462	Sus scrofa	42.11	8.00e-89	320.00
IUUC-Tgu-117186	Taeniopygia guttata	42.33	4.00e-91	327.00
IUUC-Tru-118310	Takifugu rubripes	40.61	3.00e-90	325.00
IUUC-Tsy-118927	Tarsius syrichta	37.58	4.00e-54	204.00
IUUC-Tni-120832	Tetraodon nigroviridis	38.53	3.00e-89	322.00
IUUC-Tca-121584	Theobroma cacao	58.61	4.00e-174	603.00
IUUC-Tae-123476	Triticum aestivum	86.28	0.00e+00	867.00
IUUC-Tur-126239	Triticum urartu	86.08	0.00e+00	865.00
IUUC-Tme-127108	Tuber melanosporum	36.41	5.00e-70	258.00
IUUC-Ttr-129010	Tursiops truncatus	43.29	2.00e-88	318.00
IUUC-Vpa-130374	Vicugna pacos	39.51	4.00e-27	115.00
IUUC-Vvi-131136	Vitis vinifera	68.77	2.00e-165	574.00
IUUC-Xtr-132141	Xenopus tropicalis	42.43	7.00e-91	327.00
IUUC-Xma-133980	Xiphophorus maculatus	40.44	1.00e-90	326.00
IUUC-Yli-134457	Yarrowia lipolytica	36.11	6.00e-33	135.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence