iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-110872

Ensembl Protein ID

Solyc11g005800.1.1

UniProt Accession

K4D4J3; K4D4J3_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc11g005800.1	Solyc11g005800.1.1	Solyc11g005800.1.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.90e-19	68.1	63	99

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           H++ v++l+f ++  +l+sG+d g + +W l++ ++ 
   Q: 63   HSGAVNALRFsPSgEHLASGADGGELIIWKLHSSDDS 99
           99*********666*****************998775 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MKGGTVQINW HDSKPVLCLD FHHLTGVIAT GGADYDIKMW VIDSEENEKK APSVTYQASL 60
SYHSGAVNAL RFSPSGEHLA SGADGGELII WKLHSSDDSK TWKVLKTLSF HRKDVLDLQW 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAGGGTG GTACAGTTCA GATCAATTGG CACGACAGTA AGCCAGTTTT GTGCCTTGAT 60
TTTCACCACC TCACCGGCGT TATTGCTACT GGTGGCGCCG ACTATGATAT CAAGGTTAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0033186--C:CAF-1 complex
GO:0005634--C:nucleus
GO:0042393--F:histone binding
GO:0008283--P:cell proliferation
GO:0000724--P:double-strand break repair via homologous recombination
GO:0031507--P:heterochromatin assembly
GO:0048366--P:leaf development
GO:0009933--P:meristem structural organization
GO:0006334--P:nucleosome assembly
GO:0009555--P:pollen development
GO:0010026--P:trichome differentiation

KEGG

sly:101246300

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000474	Aegilops tauschii	68.09	3.00e-155	540.00
IUUC-Aml-001755	Ailuropoda melanoleuca	38.77	3.00e-81	295.00
IUUC-Atr-002674	Amborella trichopoda	64.33	1.00e-173	602.00
IUUC-Apl-003701	Anas platyrhynchos	39.80	4.00e-84	304.00
IUUC-Aca-004692	Anolis carolinensis	39.90	1.00e-84	306.00
IUUC-Aly-006286	Arabidopsis lyrata	62.17	2.00e-175	608.00
IUUC-Ath-007683	Arabidopsis thaliana	63.24	7.00e-178	615.00
IUUC-Ago-007940	Ashbya gossypii	31.56	2.00e-60	226.00
IUUC-Acl-008070	Aspergillus clavatus	38.97	4.00e-36	145.00
IUUC-Afl-008414	Aspergillus flavus	39.49	4.00e-37	149.00
IUUC-Ani-009399	Aspergillus nidulans	38.97	3.00e-36	145.00
IUUC-Ang-009650	Aspergillus niger	37.75	4.00e-35	142.00
IUUC-Aor-009937	Aspergillus oryzae	39.49	4.00e-37	149.00
IUUC-Ame-011094	Astyanax mexicanus	41.09	1.00e-86	313.00
IUUC-Bta-013423	Bos taurus	37.99	4.00e-81	295.00
IUUC-Bdi-014860	Brachypodium distachyon	63.03	5.00e-152	530.00
IUUC-Bol-016603	Brassica oleracea	60.73	7.00e-173	599.00
IUUC-Bra-017175	Brassica rapa	62.68	4.00e-170	590.00
IUUC-Cel-018272	Caenorhabditis elegans	31.23	4.00e-42	165.00
IUUC-Cja-019558	Callithrix jacchus	39.45	1.00e-83	303.00
IUUC-Cfa-020900	Canis familiaris	37.96	6.00e-80	290.00
IUUC-Cpo-022054	Cavia porcellus	37.97	2.00e-72	266.00
IUUC-Csa-023850	Chlorocebus sabaeus	39.49	2.00e-83	302.00
IUUC-Cho-024510	Choloepus hoffmanni	27.74	1.00e-41	163.00
IUUC-Cin-025178	Ciona intestinalis	38.69	7.00e-77	280.00
IUUC-Cne-027015	Cryptococcus neoformans	35.44	2.00e-31	130.00
IUUC-Cme-027136	Cyanidioschyzon merolae	33.92	5.00e-61	228.00
IUUC-Dre-027879	Danio rerio	40.20	8.00e-86	310.00
IUUC-Dno-029335	Dasypus novemcinctus	38.56	3.00e-81	295.00
IUUC-Dor-030520	Dipodomys ordii	30.13	3.00e-52	199.00
IUUC-Dme-031838	Drosophila melanogaster	40.20	5.00e-83	301.00
IUUC-Eca-033563	Equus caballus	38.99	2.00e-83	302.00
IUUC-Fca-036052	Felis catus	38.96	3.00e-82	298.00
IUUC-Fal-037080	Ficedula albicollis	41.79	5.00e-87	314.00
IUUC-Gmo-039461	Gadus morhua	41.32	3.00e-69	254.00
IUUC-Gga-041133	Gallus gallus	40.80	6.00e-86	310.00
IUUC-Gac-041769	Gasterosteus aculeatus	40.20	8.00e-85	306.00
IUUC-Gma-043339	Glycine max	66.50	9.00e-164	569.00
IUUC-Ggo-044561	Gorilla gorilla	39.49	2.00e-83	301.00
IUUC-Hsa-046150	Homo sapiens	39.75	6.00e-84	304.00
IUUC-Hvu-047792	Hordeum vulgare	66.67	2.00e-105	374.00
IUUC-Itr-048630	Ictidomys tridecemlineatus	39.30	2.00e-83	302.00
IUUC-Kpa-049397	Komagataella pastoris	37.24	5.00e-70	257.00
IUUC-Lch-050365	Latimeria chalumnae	33.75	5.00e-55	207.00
IUUC-Lpe-050875	Leersia perrieri	63.36	4.00e-158	550.00
IUUC-Loc-052770	Lepisosteus oculatus	40.55	2.00e-85	309.00
IUUC-Lma-053291	Leptosphaeria maculans	37.11	1.00e-35	144.00
IUUC-Laf-053505	Loxodonta africana	38.81	6.00e-83	300.00
IUUC-Mcc-054803	Macaca mulatta	39.49	1.00e-83	303.00
IUUC-Meu-056578	Macropus eugenii	39.18	1.00e-37	150.00
IUUC-Mtr-058066	Medicago truncatula	65.16	1.00e-163	568.00
IUUC-Mga-059735	Meleagris gallopavo	40.55	1.00e-85	310.00
IUUC-Mmr-061343	Microcebus murinus	38.99	1.00e-82	300.00
IUUC-Mdo-062065	Monodelphis domestica	39.10	6.00e-83	300.00
IUUC-Mmu-063501	Mus musculus	39.30	3.00e-82	298.00
IUUC-Mac-064864	Musa acuminata	66.28	6.00e-173	599.00
IUUC-Mpu-066549	Mustela putorius furo	39.21	6.00e-81	294.00
IUUC-Mlu-067121	Myotis lucifugus	39.30	2.00e-85	308.00
IUUC-Nle-069854	Nomascus leucogenys	39.75	1.00e-83	302.00
IUUC-Opr-070803	Ochotona princeps	35.95	1.00e-72	266.00
IUUC-Ont-071642	Oreochromis niloticus	41.18	1.00e-87	316.00
IUUC-Oan-073675	Ornithorhynchus anatinus	39.90	1.00e-83	303.00
IUUC-Ocu-073863	Oryctolagus cuniculus	38.99	3.00e-82	298.00
IUUC-Oba-075682	Oryza barthii	67.29	5.00e-149	520.00
IUUC-Obr-076039	Oryza brachyantha	68.87	5.00e-157	546.00
IUUC-Ogu-078021	Oryza glumaepatula	69.41	3.00e-156	544.00
IUUC-Oin-079908	Oryza indica	59.90	1.00e-126	446.00
IUUC-Olo-081063	Oryza longistaminata	69.68	1.00e-156	545.00
IUUC-Ome-081930	Oryza meridionalis	69.15	9.00e-156	542.00
IUUC-Oni-082547	Oryza nivara	69.15	2.00e-155	541.00
IUUC-Opu-084089	Oryza punctata	68.62	3.00e-153	535.00
IUUC-Oru-084844	Oryza rufipogon	69.41	4.00e-156	543.00
IUUC-Osa-085582	Oryza sativa	69.41	4.00e-156	543.00
IUUC-Ola-087187	Oryzias latipes	41.56	7.00e-89	320.00
IUUC-Olu-087792	Ostreococcus lucimarinus	36.88	6.00e-73	267.00
IUUC-Oga-088390	Otolemur garnettii	38.99	2.00e-82	299.00
IUUC-Oar-089740	Ovis aries	37.90	3.00e-77	281.00
IUUC-Ptr-091581	Pan troglodytes	39.75	6.00e-84	304.00
IUUC-Pan-092258	Papio anubis	36.07	1.00e-71	263.00
IUUC-Psi-093761	Pelodiscus sinensis	40.05	7.00e-84	303.00
IUUC-Ppa-095428	Physcomitrella patens	49.89	2.00e-127	448.00
IUUC-Pfo-097357	Poecilia formosa	40.69	8.00e-87	313.00
IUUC-Pab-098520	Pongo abelii	39.75	2.00e-83	302.00
IUUC-Pop-099331	Populus trichocarpa	68.35	0.00e+00	630.00
IUUC-Ppe-101548	Prunus persica	71.19	0.00e+00	645.00
IUUC-Pva-103243	Pteropus vampyrus	41.72	3.00e-75	275.00
IUUC-Pte-104247	Pyrenophora teres	37.95	7.00e-36	145.00
IUUC-Pyt-104641	Pyrenophora triticirepentis	37.95	8.00e-36	144.00
IUUC-Rno-105202	Rattus norvegicus	39.30	6.00e-83	300.00
IUUC-Sce-106250	Saccharomyces cerevisiae	31.84	1.00e-67	249.00
IUUC-Sha-107036	Sarcophilus harrisii	39.35	7.00e-84	303.00
IUUC-Sja-107912	Schizosaccharomyces japonicus	35.71	2.00e-72	265.00
IUUC-Spo-108050	Schizosaccharomyces pombe	33.47	2.00e-61	229.00
IUUC-Ssl-108607	Sclerotinia sclerotiorum	35.86	2.00e-33	136.00
IUUC-Sit-109838	Setaria italica	61.07	6.00e-153	533.00
IUUC-Stu-111933	Solanum tuberosum	94.71	0.00e+00	886.00
IUUC-Sbi-114587	Sorghum bicolor	63.78	5.00e-152	530.00
IUUC-Ssc-115462	Sus scrofa	39.80	2.00e-84	305.00
IUUC-Tgu-117186	Taeniopygia guttata	41.29	1.00e-86	313.00
IUUC-Tru-118310	Takifugu rubripes	38.57	3.00e-88	318.00
IUUC-Tsy-118927	Tarsius syrichta	36.56	2.00e-50	192.00
IUUC-Tni-120832	Tetraodon nigroviridis	39.81	4.00e-86	311.00
IUUC-Tca-121584	Theobroma cacao	68.58	0.00e+00	643.00
IUUC-Tae-123476	Triticum aestivum	55.98	2.00e-155	541.00
IUUC-Tur-126239	Triticum urartu	68.09	2.00e-155	541.00
IUUC-Tme-127108	Tuber melanosporum	35.98	1.00e-65	243.00
IUUC-Ttr-129010	Tursiops truncatus	39.75	6.00e-83	300.00
IUUC-Vda-129825	Verticillium dahliae	36.41	3.00e-33	136.00
IUUC-Vpa-130374	Vicugna pacos	35.19	4.00e-25	108.00
IUUC-Vvi-131136	Vitis vinifera	69.82	0.00e+00	652.00
IUUC-Xtr-132141	Xenopus tropicalis	40.40	4.00e-84	304.00
IUUC-Xma-133980	Xiphophorus maculatus	40.93	3.00e-88	318.00
IUUC-Yli-134457	Yarrowia lipolytica	35.68	4.00e-32	132.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence