iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lma-053212

Ensembl Protein ID

CBX98105

UniProt Accession

E5A392; E5A392_LEPMJ

Genbank Protein ID

CBX98105.1

Protein Name

Similar to transcription initiation factor TFIID subunit 5

Genbank Nucleotide ID

FP929133

Gene Name

LEMA_P095140.1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
LEMA_P095140.1	CBX98105	CBX98105

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.00e-33	113.3	405	454
UBD/Beta-Prp	8.80e-61	205.0	350	619

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.............sd.tllvsGsdDgtikvWDlrtgvll 36
           gH+++v+++af             ++   l+s+s D+t+++W+l+t+++l
   Q: 405  GHSGPVYAVAFspatanpdptgppTNsQCLLSCSEDKTVRLWSLDTFTCL 454
           8****************887776522355******************997 PP

UBD/Beta-Prp

   S: 8    hhksvitcvkfspdksllatgsrdgtikvwdvttgkl.............lrslsgheaevtavkfspdgk............ilvtgseDrtikvwdlst 83
           +  + i+c++fs d++++a+g + + i+vw+++   l              r+l gh+++v+av fsp +              l+++seD+t+++w+l+t
   Q: 350  NTFDSINCIDFSGDNRHVAAGMAESYIRVWSMDGSPLtspddapdaqqssSRRLIGHSGPVYAVAFSPATAnpdptgpptnsqCLLSCSEDKTVRLWSLDT 450
           556789****************************999*******************************9888999999999******************** PP
   S: 84   gkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvy 184
           ++c+++++gh++ +++l++ p+g+++++Gs+drt+r+w +++ + l+ +  ghd  v cv++hp++ ++++Gs Drtvr+W ++ g++lr +tg ht+ v+
   Q: 451  FTCLVAYRGHDNPIWDLQWGPYGHYFLTGSNDRTARLWSTDHIEPLR-IYVGHDNDVDCVAFHPNNLYVFTGSCDRTVRMWHISGGNCLRLFTG-HTGNVT 549
           ***********************************************.*********************************************9.****** PP
   S: 185  slsfdsngkelvsgsldgtvklwdlqtgecvrtlnght.dnvksvrfspnderlvsgssDgsiriWdlrs 253
            +s +++gk l+s+++ g ++lw l+tg+  ++++gh    ++s+  s ++  lvs+++D+++r+Wd+ +
   Q: 550  AISCSPDGKTLASADDAGNIILWTLETGRRRKRMRGHGkGGIWSLSWSVESSVLVSAGADKTVRVWDVLQ 619
           ************************************964789************************9855 PP

Organism

Leptosphaeria maculans

Protein Sequence
(Fasta)

MSGPPPGPGP VRAMSVGNGP PSAGLPPHNG MPPQPNGPPP GSSTGPPSQA NLNQIVLEYL 60
SKKGYVRTEA MLRKESEPLA NGQALVTHST EAGGVKYTKA FELLRKYTED NLDLYRPELR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCAGGGC CCCCGCCCGG GCCCGGCCCT GTTAGGGCAA TGAGCGTGGG CAATGGGCCT 60
CCCAGTGCTG GCCTCCCCCC GCACAACGGT ATGCCTCCAC AGCCCAATGG CCCGCCGCCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0396--Initiation factor
KW-0648--Protein biosynthesis
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR006594--LisH
IPR007582--TFIID_NTD2
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08513--LisH
PF04494--TFIID_NTD2
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00667--LisH
SM00320--WD40

Gene Ontology

GO:0000124--C:SAGA complex
GO:0046695--C:SLIK (SAGA-like) complex
GO:0005669--C:transcription factor TFIID complex
GO:0003682--F:chromatin binding
GO:0003743--F:translation initiation factor activity
GO:0016573--P:histone acetylation
GO:0006366--P:transcription from RNA polymerase II promoter

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000851	Aegilops tauschii	35.53	2.00e-57	215.00
IUUC-Aml-001607	Ailuropoda melanoleuca	37.65	6.00e-78	283.00
IUUC-Atr-003136	Amborella trichopoda	37.78	3.00e-72	265.00
IUUC-Apl-004193	Anas platyrhynchos	37.35	5.00e-78	283.00
IUUC-Aca-004522	Anolis carolinensis	30.62	2.00e-81	295.00
IUUC-Aly-006476	Arabidopsis lyrata	39.22	5.00e-69	253.00
IUUC-Ath-006587	Arabidopsis thaliana	39.55	2.00e-68	251.00
IUUC-Ago-007736	Ashbya gossypii	50.37	2.00e-113	402.00
IUUC-Acl-008092	Aspergillus clavatus	53.08	0.00e+00	738.00
IUUC-Afl-008659	Aspergillus flavus	54.65	0.00e+00	743.00
IUUC-Afu-008902	Aspergillus fumigatus	53.84	0.00e+00	726.00
IUUC-Ani-009462	Aspergillus nidulans	53.93	0.00e+00	631.00
IUUC-Aor-010083	Aspergillus oryzae	54.51	0.00e+00	741.00
IUUC-Ate-010271	Aspergillus terreus	54.65	0.00e+00	725.00
IUUC-Ame-010721	Astyanax mexicanus	36.56	1.00e-76	279.00
IUUC-Bgr-012257	Blumeria graminis	45.85	4.00e-168	583.00
IUUC-Bta-013539	Bos taurus	37.65	6.00e-78	283.00
IUUC-Bci-013737	Botrytis cinerea	47.49	0.00e+00	644.00
IUUC-Bdi-015041	Brachypodium distachyon	39.22	3.00e-65	241.00
IUUC-Bol-015483	Brassica oleracea	40.33	9.00e-68	249.00
IUUC-Bra-017660	Brassica rapa	29.72	5.00e-74	270.00
IUUC-Cel-018451	Caenorhabditis elegans	25.19	8.00e-50	190.00
IUUC-Cja-018881	Callithrix jacchus	37.65	5.00e-78	283.00
IUUC-Cfa-020056	Canis familiaris	37.65	6.00e-78	283.00
IUUC-Cpo-021454	Cavia porcellus	30.08	1.00e-87	315.00
IUUC-Cre-022736	Chlamydomonas reinhardtii	32.59	2.00e-41	162.00
IUUC-Csa-023045	Chlorocebus sabaeus	37.65	8.00e-78	283.00
IUUC-Cho-024284	Choloepus hoffmanni	42.55	1.00e-63	235.00
IUUC-Cin-025457	Ciona intestinalis	38.59	4.00e-56	209.00
IUUC-Csv-025882	Ciona savignyi	34.20	3.00e-64	238.00
IUUC-Cgl-026392	Colletotrichum gloeosporioides	45.59	6.00e-167	579.00
IUUC-Cne-026876	Cryptococcus neoformans	34.51	2.00e-88	318.00
IUUC-Cme-027302	Cyanidioschyzon merolae	37.22	4.00e-60	224.00
IUUC-Dre-027980	Danio rerio	37.59	3.00e-79	287.00
IUUC-Dno-028863	Dasypus novemcinctus	37.65	7.00e-78	283.00
IUUC-Dor-030561	Dipodomys ordii	37.65	6.00e-78	283.00
IUUC-Dse-031547	Dothistroma septosporum	53.31	0.00e+00	697.00
IUUC-Dme-031917	Drosophila melanogaster	34.38	2.00e-64	238.00
IUUC-Ete-032712	Echinops telfairi	37.90	2.00e-60	224.00
IUUC-Eca-033927	Equus caballus	31.46	1.00e-86	312.00
IUUC-Eeu-034449	Erinaceus europaeus	39.48	1.00e-72	266.00
IUUC-Fca-036325	Felis catus	37.65	6.00e-78	283.00
IUUC-Fal-036604	Ficedula albicollis	36.87	1.00e-77	282.00
IUUC-Fox-038049	Fusarium oxysporum	42.10	9.00e-140	489.00
IUUC-Fso-038302	Fusarium solani	43.62	7.00e-150	522.00
IUUC-Gmo-038832	Gadus morhua	37.59	2.00e-78	285.00
IUUC-Ggr-039878	Gaeumannomyces graminis	44.72	1.00e-148	518.00
IUUC-Gga-041147	Gallus gallus	31.90	3.00e-86	311.00
IUUC-Gac-041373	Gasterosteus aculeatus	36.39	3.00e-75	275.00
IUUC-Gma-043230	Glycine max	30.99	8.00e-86	309.00
IUUC-Ggo-044568	Gorilla gorilla	38.17	8.00e-60	223.00
IUUC-Hsa-045971	Homo sapiens	37.65	4.00e-78	284.00
IUUC-Hvu-047695	Hordeum vulgare	39.29	1.00e-66	245.00
IUUC-Itr-048400	Ictidomys tridecemlineatus	37.65	4.00e-78	284.00
IUUC-Kpa-049402	Komagataella pastoris	38.62	2.00e-126	444.00
IUUC-Lch-049526	Latimeria chalumnae	36.21	1.00e-70	259.00
IUUC-Lpe-051560	Leersia perrieri	38.66	9.00e-67	246.00
IUUC-Loc-052882	Lepisosteus oculatus	37.35	1.00e-78	285.00
IUUC-Laf-053859	Loxodonta africana	37.65	5.00e-78	284.00
IUUC-Mcc-054957	Macaca mulatta	37.65	1.00e-77	281.00
IUUC-Meu-056182	Macropus eugenii	39.69	9.00e-60	223.00
IUUC-Mor-057024	Magnaporthe oryzae	43.36	1.00e-156	545.00
IUUC-Mpo-057520	Magnaporthe poae	41.94	2.00e-150	524.00
IUUC-Mtr-058754	Medicago truncatula	30.75	9.00e-84	302.00
IUUC-Mla-058881	Melampsora laricipopulina	35.96	2.00e-78	285.00
IUUC-Mga-059776	Meleagris gallopavo	31.42	1.00e-86	312.00
IUUC-Mvi-060208	Microbotryum violaceum	46.04	5.00e-89	320.00
IUUC-Mmr-061783	Microcebus murinus	37.65	1.00e-77	281.00
IUUC-Mdo-062856	Monodelphis domestica	30.66	3.00e-83	301.00
IUUC-Mmu-064218	Mus musculus	37.65	5.00e-78	283.00
IUUC-Mac-064886	Musa acuminata	38.41	1.00e-55	209.00
IUUC-Mpu-065735	Mustela putorius furo	37.65	6.00e-78	283.00
IUUC-Mlu-067544	Myotis lucifugus	37.56	2.00e-76	278.00
IUUC-Nfi-068502	Neosartorya fischeri	53.22	0.00e+00	731.00
IUUC-Ncr-068891	Neurospora crassa	45.84	7.00e-151	526.00
IUUC-Nle-069389	Nomascus leucogenys	37.65	4.00e-78	284.00
IUUC-Opr-071042	Ochotona princeps	35.93	5.00e-68	250.00
IUUC-Ont-071455	Oreochromis niloticus	38.07	5.00e-80	290.00
IUUC-Oan-073181	Ornithorhynchus anatinus	30.36	7.00e-82	296.00
IUUC-Ocu-073758	Oryctolagus cuniculus	30.71	5.00e-88	317.00
IUUC-Oba-075739	Oryza barthii	37.68	5.00e-59	220.00
IUUC-Obr-076111	Oryza brachyantha	39.94	1.00e-72	265.00
IUUC-Ogl-077914	Oryza glaberrima	36.86	2.00e-60	225.00
IUUC-Ogu-078057	Oryza glumaepatula	39.78	9.00e-53	199.00
IUUC-Oin-079473	Oryza indica	38.10	4.00e-63	234.00
IUUC-Olo-080557	Oryza longistaminata	42.40	9.00e-58	216.00
IUUC-Ome-081831	Oryza meridionalis	39.78	1.00e-52	199.00
IUUC-Oni-082441	Oryza nivara	39.78	1.00e-52	199.00
IUUC-Opu-083325	Oryza punctata	29.33	2.00e-66	244.00
IUUC-Oru-085131	Oryza rufipogon	39.78	2.00e-52	198.00
IUUC-Osa-086189	Oryza sativa	38.10	4.00e-63	234.00
IUUC-Ola-086574	Oryzias latipes	37.77	1.00e-79	289.00
IUUC-Olu-087616	Ostreococcus lucimarinus	36.97	5.00e-68	250.00
IUUC-Oga-088827	Otolemur garnettii	37.65	7.00e-78	283.00
IUUC-Oar-089648	Ovis aries	37.65	6.00e-78	283.00
IUUC-Ptr-091195	Pan troglodytes	37.65	5.00e-78	283.00
IUUC-Pan-091978	Papio anubis	37.65	4.00e-78	284.00
IUUC-Psi-093598	Pelodiscus sinensis	31.76	1.00e-79	288.00
IUUC-Pma-094593	Petromyzon marinus	38.51	3.00e-50	191.00
IUUC-Pno-094823	Phaeosphaeria nodorum	82.58	0.00e+00	1059.00
IUUC-Ppa-095455	Physcomitrella patens	30.13	7.00e-80	290.00
IUUC-Pfo-097120	Poecilia formosa	38.80	9.00e-80	289.00
IUUC-Pab-098771	Pongo abelii	37.65	4.00e-78	284.00
IUUC-Pop-099542	Populus trichocarpa	32.25	2.00e-85	308.00
IUUC-Pca-100727	Procavia capensis	37.10	3.00e-59	221.00
IUUC-Ppe-101686	Prunus persica	30.35	5.00e-79	286.00
IUUC-Pva-102414	Pteropus vampyrus	33.09	9.00e-58	216.00
IUUC-Pgr-103603	Puccinia graminis	32.16	2.00e-82	298.00
IUUC-Ptt-103995	Puccinia triticina	36.66	4.00e-68	251.00
IUUC-Pte-104359	Pyrenophora teres	83.47	0.00e+00	1120.00
IUUC-Pyt-104523	Pyrenophora triticirepentis	82.08	0.00e+00	1083.00
IUUC-Rno-105064	Rattus norvegicus	37.65	3.00e-78	284.00
IUUC-Sce-106186	Saccharomyces cerevisiae	34.65	3.00e-125	441.00
IUUC-Sha-106582	Sarcophilus harrisii	31.62	6.00e-86	310.00
IUUC-Sja-107683	Schizosaccharomyces japonicus	39.97	4.00e-127	446.00
IUUC-Spo-108142	Schizosaccharomyces pombe	38.72	4.00e-127	446.00
IUUC-Ssl-108456	Sclerotinia sclerotiorum	47.91	8.00e-178	615.00
IUUC-Smo-109097	Selaginella moellendorffii	30.48	9.00e-82	296.00
IUUC-Sit-109804	Setaria italica	29.33	6.00e-79	286.00
IUUC-Sly-111693	Solanum lycopersicum	29.73	5.00e-80	290.00
IUUC-Sar-113381	Sorex araneus	38.24	1.00e-64	239.00
IUUC-Sbi-114849	Sorghum bicolor	29.44	6.00e-77	280.00
IUUC-Sre-114945	Sporisorium reilianum	37.61	7.00e-78	283.00
IUUC-Ssc-115582	Sus scrofa	36.38	2.00e-74	271.00
IUUC-Tgu-116899	Taeniopygia guttata	37.11	1.00e-77	282.00
IUUC-Tru-118011	Takifugu rubripes	36.87	4.00e-76	277.00
IUUC-Tsy-119622	Tarsius syrichta	28.57	7.00e-34	136.00
IUUC-Tni-120598	Tetraodon nigroviridis	36.96	9.00e-75	273.00
IUUC-Tca-121247	Theobroma cacao	31.55	3.00e-87	314.00
IUUC-Tre-121949	Trichoderma reesei	43.92	3.00e-148	516.00
IUUC-Tvi-122626	Trichoderma virens	43.57	4.00e-161	560.00
IUUC-Tae-125816	Triticum aestivum	39.01	7.00e-67	246.00
IUUC-Tur-126005	Triticum urartu	35.16	6.00e-57	213.00
IUUC-Tme-126904	Tuber melanosporum	42.98	6.00e-144	503.00
IUUC-Tbe-127254	Tupaia belangeri	32.37	8.00e-56	210.00
IUUC-Ttr-128544	Tursiops truncatus	37.65	3.00e-78	284.00
IUUC-Uma-129379	Ustilago maydis	37.74	4.00e-78	284.00
IUUC-Vda-129761	Verticillium dahliae	43.00	2.00e-141	494.00
IUUC-Vpa-130485	Vicugna pacos	37.65	6.00e-78	283.00
IUUC-Vvi-131171	Vitis vinifera	30.53	5.00e-85	306.00
IUUC-Xtr-132241	Xenopus tropicalis	28.84	3.00e-64	237.00
IUUC-Xma-133583	Xiphophorus maculatus	38.55	7.00e-80	290.00
IUUC-Yli-134446	Yarrowia lipolytica	39.61	5.00e-123	433.00
IUUC-Zma-135722	Zea mays	38.38	3.00e-65	241.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence