iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099728

Ensembl Protein ID

POPTR_0002s17470.1

UniProt Accession

B9GR39; B9GR39_POPTR

Genbank Protein ID

EEE81919.2

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000338

Gene Name

POPTRDRAFT_1072396; POPTR_0002s17470g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0002s17470	POPTR_0002s17470.1	POPTR_0002s17470.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.90e-29	99.3	414	444

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWD 29
           H+d vtc++f   d ++++sGs Dg++++W 
   Q: 414  HNDYVTCVQFnpVDeNYFISGSIDGKVRIWA 444
           9**********9666***************6 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MEILSEEEDQ FFDTCEDCPS VSDPGSDSPD NLDSDFGVIG SLPGSIGYEV WIKNPGCIRE 60
RRNKFLKWMG LDVNQAGKGD PGNTSSNEVE VETDRIMEHS DAVLRSYSLD DGLSSSQSSM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTCCTCTTCC TTTGTTAATT TTTCTTTATG CTGTTTTCAG CGCAACAGTA CCTGCTCCAT 60
TGCTTGCTAT ATCTTTGTGT GTGTCGTTGG GTTTTGTTTT GAGATTTGGG GTTTGCTTAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

pop:POPTR_0002s17470g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000343	Aegilops tauschii	55.05	1.00e-144	506.00
IUUC-Aml-001198	Ailuropoda melanoleuca	34.99	4.00e-54	206.00
IUUC-Atr-002755	Amborella trichopoda	54.35	0.00e+00	753.00
IUUC-Apl-003781	Anas platyrhynchos	34.81	6.00e-55	208.00
IUUC-Aca-005216	Anolis carolinensis	34.11	5.00e-55	209.00
IUUC-Acl-008290	Aspergillus clavatus	30.00	2.00e-40	160.00
IUUC-Afl-008536	Aspergillus flavus	33.15	3.00e-53	202.00
IUUC-Aor-010153	Aspergillus oryzae	33.15	3.00e-53	202.00
IUUC-Ame-011096	Astyanax mexicanus	34.41	6.00e-54	205.00
IUUC-Bgr-012014	Blumeria graminis	35.18	3.00e-54	205.00
IUUC-Bta-012991	Bos taurus	34.99	5.00e-54	205.00
IUUC-Bci-013651	Botrytis cinerea	30.39	2.00e-57	217.00
IUUC-Bdi-014664	Brachypodium distachyon	47.08	5.00e-162	564.00
IUUC-Cel-018681	Caenorhabditis elegans	34.73	7.00e-54	205.00
IUUC-Cja-019169	Callithrix jacchus	35.34	2.00e-53	204.00
IUUC-Cfa-020909	Canis familiaris	34.99	4.00e-54	206.00
IUUC-Cpo-021357	Cavia porcellus	35.34	6.00e-54	205.00
IUUC-Csa-023121	Chlorocebus sabaeus	34.99	3.00e-54	206.00
IUUC-Cin-025347	Ciona intestinalis	34.28	9.00e-55	207.00
IUUC-Csv-025844	Ciona savignyi	32.32	4.00e-50	192.00
IUUC-Cgl-026610	Colletotrichum gloeosporioides	35.51	1.00e-55	211.00
IUUC-Dre-028529	Danio rerio	35.07	9.00e-56	211.00
IUUC-Dor-030184	Dipodomys ordii	39.22	3.00e-43	169.00
IUUC-Ete-032457	Echinops telfairi	30.49	7.00e-38	152.00
IUUC-Eca-033319	Equus caballus	34.99	4.00e-54	206.00
IUUC-Fal-037153	Ficedula albicollis	34.53	3.00e-54	206.00
IUUC-Fso-038143	Fusarium solani	32.52	1.00e-53	204.00
IUUC-Gga-040349	Gallus gallus	34.81	9.00e-55	208.00
IUUC-Gac-041620	Gasterosteus aculeatus	34.99	2.00e-54	207.00
IUUC-Ggo-044646	Gorilla gorilla	34.99	2.00e-54	206.00
IUUC-Hsa-046353	Homo sapiens	34.99	3.00e-54	206.00
IUUC-Hvu-047828	Hordeum vulgare	52.84	7.00e-159	553.00
IUUC-Itr-048620	Ictidomys tridecemlineatus	34.99	3.00e-54	206.00
IUUC-Lch-049794	Latimeria chalumnae	34.81	3.00e-54	206.00
IUUC-Laf-054066	Loxodonta africana	34.53	4.00e-54	206.00
IUUC-Mcc-055055	Macaca mulatta	34.99	3.00e-54	206.00
IUUC-Mga-059659	Meleagris gallopavo	35.14	5.00e-53	202.00
IUUC-Mvi-060254	Microbotryum violaceum	38.87	8.00e-55	208.00
IUUC-Mmr-060832	Microcebus murinus	35.26	2.00e-54	207.00
IUUC-Mdo-062300	Monodelphis domestica	34.53	3.00e-55	209.00
IUUC-Mmu-064277	Mus musculus	34.71	5.00e-54	206.00
IUUC-Mac-065324	Musa acuminata	50.91	1.00e-178	619.00
IUUC-Mpu-065914	Mustela putorius furo	34.99	4.00e-54	206.00
IUUC-Mlu-067853	Myotis lucifugus	34.99	2.00e-54	206.00
IUUC-Nfi-068449	Neosartorya fischeri	29.67	1.00e-36	148.00
IUUC-Nle-069802	Nomascus leucogenys	34.99	3.00e-54	206.00
IUUC-Opr-071139	Ochotona princeps	38.25	2.00e-43	170.00
IUUC-Ont-072128	Oreochromis niloticus	35.50	1.00e-53	204.00
IUUC-Ocu-074311	Oryctolagus cuniculus	34.99	9.00e-55	208.00
IUUC-Oba-075653	Oryza barthii	46.79	3.00e-141	495.00
IUUC-Obr-076256	Oryza brachyantha	50.62	3.00e-149	521.00
IUUC-Ogl-077818	Oryza glaberrima	49.20	4.00e-147	514.00
IUUC-Ogu-078138	Oryza glumaepatula	46.94	2.00e-142	499.00
IUUC-Oin-079480	Oryza indica	49.20	1.00e-147	516.00
IUUC-Olo-080838	Oryza longistaminata	49.04	9.00e-148	516.00
IUUC-Ome-081177	Oryza meridionalis	46.20	5.00e-163	567.00
IUUC-Oni-082466	Oryza nivara	49.20	2.00e-147	516.00
IUUC-Opu-083616	Oryza punctata	45.93	2.00e-145	509.00
IUUC-Oru-084265	Oryza rufipogon	46.94	2.00e-142	499.00
IUUC-Osa-085283	Oryza sativa	49.20	1.00e-147	516.00
IUUC-Oar-090357	Ovis aries	34.99	6.00e-54	205.00
IUUC-Pan-092290	Papio anubis	34.99	2.00e-54	206.00
IUUC-Psi-094089	Pelodiscus sinensis	35.08	2.00e-55	210.00
IUUC-Pfo-097366	Poecilia formosa	34.48	6.00e-54	205.00
IUUC-Pab-098364	Pongo abelii	34.99	2.00e-54	206.00
IUUC-Pva-102846	Pteropus vampyrus	39.22	4.00e-43	169.00
IUUC-Rno-105467	Rattus norvegicus	34.71	5.00e-54	206.00
IUUC-Sha-106778	Sarcophilus harrisii	34.81	1.00e-54	207.00
IUUC-Sit-110689	Setaria italica	47.00	9.00e-163	566.00
IUUC-Sbi-114128	Sorghum bicolor	45.96	4.00e-165	574.00
IUUC-Tgu-116614	Taeniopygia guttata	34.81	1.00e-54	208.00
IUUC-Tru-117808	Takifugu rubripes	35.54	3.00e-54	206.00
IUUC-Tca-121635	Theobroma cacao	70.95	0.00e+00	986.00
IUUC-Tre-122175	Trichoderma reesei	32.86	2.00e-50	193.00
IUUC-Tvi-122654	Trichoderma virens	31.43	2.00e-53	204.00
IUUC-Tae-122963	Triticum aestivum	49.36	1.00e-156	546.00
IUUC-Tur-126616	Triticum urartu	50.08	9.00e-146	510.00
IUUC-Tbe-127531	Tupaia belangeri	39.22	3.00e-42	166.00
IUUC-Ttr-128970	Tursiops truncatus	34.99	4.00e-54	206.00
IUUC-Vda-129935	Verticillium dahliae	32.05	4.00e-56	213.00
IUUC-Vpa-130109	Vicugna pacos	38.72	6.00e-43	169.00
IUUC-Vvi-130979	Vitis vinifera	68.18	0.00e+00	959.00
IUUC-Xtr-132836	Xenopus tropicalis	35.62	5.00e-55	209.00
IUUC-Xma-134131	Xiphophorus maculatus	34.48	7.00e-54	205.00
IUUC-Yli-134376	Yarrowia lipolytica	35.36	5.00e-50	192.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence