iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	55.65	2.00e-69	258.00	IUUC-Cel-018377
E3 adaptor/Cullin RING/SCF/F-box	67.22	2.00e-94	342.00	IUUC-Dme-032049
E3 adaptor/Cullin RING/SCF/F-box	92.53	9.00e-131	463.00	IUUC-Hsa-046619

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

GPGAGAPAGS GAAGGPASAR GASAAGSASS GIGGRLDQAG AWMVFSSWSC PACGSCALVC 60
RQGTAALHGD ETSEVWRSLC ARSLAEEALR TDILCNLPSY KAKVRAFQHA FSTNDCSRNV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGCCCGGGGG CTGGGGCACC CGCGGGCAGC GGCGCAGCTG GCGGGCCGGC GAGCGCGCGC 60
GGCGCCAGCG CCCGGCGCGG GATCCGCGTC CTCCGGGATC GGCGGCCGGT TGGACCAGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001870--B30.2/SPRY
IPR013320--ConA-like_dom
IPR003877--SPRY_dom

PROSITE

PS50188--B302_SPRY

Pfam

PF00622--SPRY

SMART

SM00449--SPRY

Gene Ontology

GO:0014069--C:postsynaptic density
GO:0021960--P:anterior commissure morphogenesis
GO:0006974--P:cellular response to DNA damage stimulus
GO:0021799--P:cerebral cortex radially oriented cell migration
GO:0021800--P:cerebral cortex tangential migration
GO:0021957--P:corticospinal tract morphogenesis
GO:0001764--P:neuron migration
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0060386--P:synapse assembly involved in innervation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001815	Ailuropoda melanoleuca	92.53	7.00e-132	462.00
IUUC-Apl-003739	Anas platyrhynchos	98.41	1.00e-71	260.00
IUUC-Aca-005393	Anolis carolinensis	90.04	1.00e-119	422.00
IUUC-Ame-011341	Astyanax mexicanus	81.67	1.00e-118	418.00
IUUC-Bta-013136	Bos taurus	92.53	5.00e-132	463.00
IUUC-Cel-018377	Caenorhabditis elegans	55.65	4.00e-70	258.00
IUUC-Cja-019860	Callithrix jacchus	92.53	3.00e-132	464.00
IUUC-Cfa-020372	Canis familiaris	90.46	3.00e-128	450.00
IUUC-Cpo-022254	Cavia porcellus	92.53	2.00e-131	461.00
IUUC-Csa-023427	Chlorocebus sabaeus	92.53	5.00e-132	463.00
IUUC-Cho-024723	Choloepus hoffmanni	87.78	3.00e-90	323.00
IUUC-Cin-025644	Ciona intestinalis	60.42	5.00e-88	317.00
IUUC-Csv-025822	Ciona savignyi	60.83	6.00e-88	317.00
IUUC-Dre-028352	Danio rerio	82.92	6.00e-119	420.00
IUUC-Dno-029763	Dasypus novemcinctus	93.36	9.00e-133	465.00
IUUC-Dor-030984	Dipodomys ordii	93.36	1.00e-132	465.00
IUUC-Dse-031450	Dothistroma septosporum	50.00	1.40e-01	30.80
IUUC-Dme-032049	Drosophila melanogaster	67.22	1.00e-95	342.00
IUUC-Eca-034006	Equus caballus	99.08	6.00e-129	452.00
IUUC-Eeu-035294	Erinaceus europaeus	100.00	2.00e-107	380.00
IUUC-Fca-035599	Felis catus	92.95	3.00e-132	464.00
IUUC-Fal-037304	Ficedula albicollis	90.04	2.00e-121	428.00
IUUC-Gmo-038969	Gadus morhua	83.75	1.00e-120	425.00
IUUC-Gga-040625	Gallus gallus	99.07	3.00e-61	225.00
IUUC-Gac-041926	Gasterosteus aculeatus	82.08	2.00e-118	417.00
IUUC-Ggo-045114	Gorilla gorilla	96.07	4.00e-131	459.00
IUUC-Hsa-046619	Homo sapiens	92.53	3.00e-132	464.00
IUUC-Itr-049037	Ictidomys tridecemlineatus	93.36	1.00e-132	465.00
IUUC-Lch-049702	Latimeria chalumnae	87.55	1.00e-126	445.00
IUUC-Loc-052199	Lepisosteus oculatus	85.00	5.00e-122	430.00
IUUC-Laf-054069	Loxodonta africana	93.36	8.00e-133	466.00
IUUC-Mcc-055362	Macaca mulatta	92.53	3.00e-132	464.00
IUUC-Meu-056400	Macropus eugenii	86.67	9.00e-90	322.00
IUUC-Mla-058812	Melampsora laricipopulina	37.50	1.20e-01	31.20
IUUC-Mga-059682	Meleagris gallopavo	93.45	2.00e-120	424.00
IUUC-Mmr-061545	Microcebus murinus	92.95	2.00e-132	464.00
IUUC-Mdo-063044	Monodelphis domestica	92.95	3.00e-132	464.00
IUUC-Mmu-063211	Mus musculus	93.36	9.00e-133	465.00
IUUC-Mpu-065969	Mustela putorius furo	92.95	3.00e-132	464.00
IUUC-Mlu-067484	Myotis lucifugus	97.18	9.00e-121	425.00
IUUC-Nle-069299	Nomascus leucogenys	92.53	4.00e-132	463.00
IUUC-Ont-071824	Oreochromis niloticus	82.92	7.00e-119	419.00
IUUC-Ocu-074917	Oryctolagus cuniculus	92.95	2.00e-132	464.00
IUUC-Ola-087014	Oryzias latipes	82.08	1.00e-118	419.00
IUUC-Oga-089176	Otolemur garnettii	92.12	3.00e-131	461.00
IUUC-Oar-089517	Ovis aries	90.46	9.00e-128	449.00
IUUC-Ptr-091318	Pan troglodytes	98.89	7.00e-107	379.00
IUUC-Pan-092627	Papio anubis	92.53	3.00e-132	464.00
IUUC-Psi-093937	Pelodiscus sinensis	100.00	2.00e-107	380.00
IUUC-Pfo-097200	Poecilia formosa	80.83	6.00e-117	413.00
IUUC-Pva-102717	Pteropus vampyrus	93.36	8.00e-133	466.00
IUUC-Sha-107117	Sarcophilus harrisii	99.44	5.00e-107	379.00
IUUC-Sar-113757	Sorex araneus	100.00	2.00e-107	380.00
IUUC-Tgu-117169	Taeniopygia guttata	97.80	1.00e-105	375.00
IUUC-Tru-118146	Takifugu rubripes	83.33	2.00e-119	421.00
IUUC-Tni-120858	Tetraodon nigroviridis	82.92	4.00e-118	417.00
IUUC-Tbe-128110	Tupaia belangeri	91.67	4.00e-121	426.00
IUUC-Ttr-128569	Tursiops truncatus	92.53	2.00e-132	464.00
IUUC-Vpa-130507	Vicugna pacos	92.53	4.00e-132	463.00
IUUC-Xtr-132793	Xenopus tropicalis	89.21	1.00e-128	451.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence