iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111410

Ensembl Protein ID

Solyc04g082470.1.1

UniProt Accession

K4BVX4; K4BVX4_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc04g082470.1	Solyc04g082470.1.1	Solyc04g082470.1.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.80e-17	62.4	267	300

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDlrt 32
           H++sv+++a+   s++++++++dD +  +WDl++
   Q: 267  HQASVNAIAWaphSSCHICTAGDDSQALIWDLSS 300
           99*********8644****************976 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MGASSDPNQQ DGSDEQQRRS EIYTYEAPWH IYAMNWSVRK DKKYRLAIAS LLEQYQNRVE 60
IVQLDDSNGE IRSDPKLSFE HPYPPTKVIF IPDKECQKPD LIATSSDYLR IWRVSNDNSR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGAGCAA GCAGTGATCC GAACCAGCAA GATGGTTCCG ACGAACAGCA GAGACGCTCC 60
GAGATCTACA CCTACGAGGC TCCATGGCAC ATATACGCTA TGAATTGGAG TGTTCGCAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus

KEGG

sly:101260134

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002310	Ailuropoda melanoleuca	58.03	3.00e-98	350.00
IUUC-Atr-002576	Amborella trichopoda	87.83	0.00e+00	631.00
IUUC-Apl-003746	Anas platyrhynchos	58.03	3.00e-98	350.00
IUUC-Aca-005293	Anolis carolinensis	58.84	4.00e-117	413.00
IUUC-Aly-006500	Arabidopsis lyrata	90.49	0.00e+00	658.00
IUUC-Ath-006739	Arabidopsis thaliana	90.78	0.00e+00	659.00
IUUC-Ago-007732	Ashbya gossypii	31.41	1.00e-38	153.00
IUUC-Ame-010643	Astyanax mexicanus	53.62	2.00e-100	357.00
IUUC-Bta-013199	Bos taurus	58.84	6.00e-117	412.00
IUUC-Bdi-014374	Brachypodium distachyon	69.07	5.00e-147	513.00
IUUC-Bra-017922	Brassica rapa	89.63	0.00e+00	649.00
IUUC-Cel-018487	Caenorhabditis elegans	52.87	2.00e-105	375.00
IUUC-Cja-018736	Callithrix jacchus	58.84	6.00e-117	412.00
IUUC-Cfa-020446	Canis familiaris	58.84	6.00e-117	412.00
IUUC-Cpo-022424	Cavia porcellus	58.84	6.00e-117	412.00
IUUC-Cre-022609	Chlamydomonas reinhardtii	66.76	4.00e-137	479.00
IUUC-Csa-024013	Chlorocebus sabaeus	57.96	6.00e-101	361.00
IUUC-Cho-024507	Choloepus hoffmanni	58.28	1.00e-97	348.00
IUUC-Cin-025620	Ciona intestinalis	59.13	9.00e-119	419.00
IUUC-Csv-026111	Ciona savignyi	59.71	3.00e-119	420.00
IUUC-Cne-026871	Cryptococcus neoformans	33.33	2.00e-43	168.00
IUUC-Dre-027940	Danio rerio	58.84	3.00e-117	413.00
IUUC-Dno-029520	Dasypus novemcinctus	58.84	6.00e-117	412.00
IUUC-Dor-030262	Dipodomys ordii	63.64	9.00e-34	136.00
IUUC-Dme-031639	Drosophila melanogaster	56.86	5.00e-115	406.00
IUUC-Ete-032605	Echinops telfairi	50.00	2.00e-86	311.00
IUUC-Eca-033668	Equus caballus	54.49	2.00e-102	364.00
IUUC-Fca-035942	Felis catus	58.84	6.00e-117	412.00
IUUC-Fal-037544	Ficedula albicollis	58.84	6.00e-117	412.00
IUUC-Fox-037852	Fusarium oxysporum	34.54	2.00e-50	192.00
IUUC-Gmo-038850	Gadus morhua	59.13	2.00e-117	414.00
IUUC-Gga-040439	Gallus gallus	58.84	6.00e-117	412.00
IUUC-Gac-041776	Gasterosteus aculeatus	58.84	4.00e-117	413.00
IUUC-Gma-043558	Glycine max	91.93	0.00e+00	661.00
IUUC-Ggo-044490	Gorilla gorilla	58.84	6.00e-117	412.00
IUUC-Hsa-046015	Homo sapiens	58.84	6.00e-117	412.00
IUUC-Hvu-047667	Hordeum vulgare	68.46	1.00e-147	514.00
IUUC-Itr-048428	Ictidomys tridecemlineatus	58.84	6.00e-117	412.00
IUUC-Lch-049754	Latimeria chalumnae	59.13	1.00e-117	415.00
IUUC-Lpe-050741	Leersia perrieri	69.43	1.00e-148	518.00
IUUC-Loc-052351	Lepisosteus oculatus	58.50	8.00e-115	405.00
IUUC-Laf-054077	Loxodonta africana	58.84	6.00e-117	412.00
IUUC-Mcc-055728	Macaca mulatta	58.84	6.00e-117	412.00
IUUC-Meu-056685	Macropus eugenii	52.80	8.00e-89	319.00
IUUC-Mtr-057654	Medicago truncatula	88.95	0.00e+00	649.00
IUUC-Mga-059566	Meleagris gallopavo	58.03	3.00e-98	350.00
IUUC-Mmr-060831	Microcebus murinus	58.84	6.00e-117	412.00
IUUC-Mdo-062612	Monodelphis domestica	58.84	6.00e-117	412.00
IUUC-Mmu-063399	Mus musculus	58.84	6.00e-117	412.00
IUUC-Mac-065226	Musa acuminata	76.40	2.00e-155	540.00
IUUC-Mpu-065951	Mustela putorius furo	58.84	6.00e-117	412.00
IUUC-Mlu-067858	Myotis lucifugus	58.96	6.00e-116	409.00
IUUC-Nle-070059	Nomascus leucogenys	58.84	6.00e-117	412.00
IUUC-Opr-070572	Ochotona princeps	59.18	5.00e-117	413.00
IUUC-Ont-071420	Oreochromis niloticus	57.10	5.00e-113	400.00
IUUC-Ocu-074105	Oryctolagus cuniculus	58.84	6.00e-117	412.00
IUUC-Oba-075409	Oryza barthii	69.79	8.00e-148	516.00
IUUC-Obr-076284	Oryza brachyantha	68.30	4.00e-128	450.00
IUUC-Ogl-076984	Oryza glaberrima	69.79	5.00e-148	516.00
IUUC-Ogu-078283	Oryza glumaepatula	69.53	4.00e-148	516.00
IUUC-Olo-081042	Oryza longistaminata	76.65	3.00e-108	383.00
IUUC-Ome-081174	Oryza meridionalis	69.53	3.00e-148	516.00
IUUC-Oni-082033	Oryza nivara	69.53	5.00e-148	516.00
IUUC-Opu-084034	Oryza punctata	69.90	4.00e-149	520.00
IUUC-Oru-084908	Oryza rufipogon	69.14	8.00e-132	463.00
IUUC-Osa-085678	Oryza sativa	69.53	5.00e-148	516.00
IUUC-Ola-086324	Oryzias latipes	59.13	2.00e-117	414.00
IUUC-Olu-087620	Ostreococcus lucimarinus	76.13	2.00e-154	537.00
IUUC-Oga-088446	Otolemur garnettii	58.84	6.00e-117	412.00
IUUC-Oar-090168	Ovis aries	58.84	6.00e-117	412.00
IUUC-Ptr-090691	Pan troglodytes	59.01	5.00e-117	413.00
IUUC-Pan-092772	Papio anubis	58.84	6.00e-117	412.00
IUUC-Psi-093304	Pelodiscus sinensis	60.22	3.00e-91	327.00
IUUC-Pma-094292	Petromyzon marinus	58.55	3.00e-99	353.00
IUUC-Ppa-095734	Physcomitrella patens	81.08	2.00e-166	577.00
IUUC-Pfo-097157	Poecilia formosa	59.13	2.00e-117	414.00
IUUC-Pab-097898	Pongo abelii	57.96	1.00e-100	360.00
IUUC-Pop-099594	Populus trichocarpa	92.80	0.00e+00	674.00
IUUC-Pca-100404	Procavia capensis	59.18	5.00e-117	413.00
IUUC-Ppe-102015	Prunus persica	90.20	0.00e+00	656.00
IUUC-Pva-102938	Pteropus vampyrus	52.61	4.00e-58	217.00
IUUC-Pgr-103490	Puccinia graminis	34.03	9.00e-58	216.00
IUUC-Ptt-103946	Puccinia triticina	37.32	2.00e-56	211.00
IUUC-Rno-104961	Rattus norvegicus	58.84	6.00e-117	412.00
IUUC-Sce-106252	Saccharomyces cerevisiae	34.81	3.00e-43	169.00
IUUC-Sha-107196	Sarcophilus harrisii	47.41	8.00e-93	332.00
IUUC-Sja-107768	Schizosaccharomyces japonicus	36.89	1.00e-48	186.00
IUUC-Spo-108014	Schizosaccharomyces pombe	37.38	5.00e-49	187.00
IUUC-Smo-109172	Selaginella moellendorffii	78.11	4.00e-154	536.00
IUUC-Sit-110625	Setaria italica	68.23	5.00e-108	383.00
IUUC-Stu-112854	Solanum tuberosum	98.27	0.00e+00	705.00
IUUC-Sar-113705	Sorex araneus	53.06	3.00e-91	327.00
IUUC-Sbi-114474	Sorghum bicolor	66.75	2.00e-144	504.00
IUUC-Ssc-116028	Sus scrofa	58.84	6.00e-117	412.00
IUUC-Tgu-117189	Taeniopygia guttata	58.84	6.00e-117	412.00
IUUC-Tru-117581	Takifugu rubripes	59.13	2.00e-117	414.00
IUUC-Tsy-119425	Tarsius syrichta	45.36	1.00e-65	242.00
IUUC-Tni-120649	Tetraodon nigroviridis	58.84	2.00e-115	408.00
IUUC-Tca-121561	Theobroma cacao	92.80	0.00e+00	671.00
IUUC-Tae-123331	Triticum aestivum	68.81	5.00e-147	513.00
IUUC-Tur-126531	Triticum urartu	71.09	3.00e-149	521.00
IUUC-Tbe-127919	Tupaia belangeri	59.18	5.00e-117	413.00
IUUC-Ttr-129135	Tursiops truncatus	62.36	6.00e-60	223.00
IUUC-Uma-129362	Ustilago maydis	34.30	1.00e-50	193.00
IUUC-Vpa-130486	Vicugna pacos	35.55	2.00e-43	168.00
IUUC-Vvi-131265	Vitis vinifera	91.93	0.00e+00	660.00
IUUC-Xtr-132175	Xenopus tropicalis	58.84	5.00e-117	413.00
IUUC-Xma-134129	Xiphophorus maculatus	59.13	2.00e-117	414.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence