iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
RAID2
Protein-protein Interaction
IID
Post-translational Modifications (PTMs)
dbPAF	PhosphositePlus
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.80e-16	58.9	214	245

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sdtllvsGsdDgtikvWDlrt 32
           H+d v+ ++f +++l++++sdD ti +WDlr+
   Q: 214  HEDCVNNIRFlDNRLFATCSDDTTIALWDLRK 245
           9*********7669***************986 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MFPFGPHSPG GDGAAGAEEP PPLGGPAAAS RPPSPAPRPA SPQRGADAAS PPPATGSPRL 60
RGSPAVSPAE RAGELAAPEA LELSAAASQA ELSPSSSPRR RSRPDCKAGS WSRQGLSAGL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCGGAATAGG GGGCGGGGGC GTTGGTCATG TTTCCCTTCG GGCCCCACAG CCCGGGCGGG 60
GACGGGGCGG CTGGAGCTGA GGAGCCGCCG CCTCTCGGAG GGCCGGCGGC AGCTTCCAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR000772--Ricin_B_lectin
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50231--RICIN_B_LECTIN
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0080008--C:Cul4-RING E3 ubiquitin ligase complex

KEGG

rno:313242

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002004	Ailuropoda melanoleuca	93.78	0.00e+00	764.00
IUUC-Apl-003942	Anas platyrhynchos	91.33	0.00e+00	693.00
IUUC-Aca-005259	Anolis carolinensis	86.76	0.00e+00	757.00
IUUC-Ame-010936	Astyanax mexicanus	78.38	0.00e+00	710.00
IUUC-Bta-012820	Bos taurus	89.13	0.00e+00	843.00
IUUC-Cja-019380	Callithrix jacchus	88.14	0.00e+00	875.00
IUUC-Cfa-021136	Canis familiaris	93.79	0.00e+00	803.00
IUUC-Cpo-021784	Cavia porcellus	92.61	0.00e+00	829.00
IUUC-Csa-024250	Chlorocebus sabaeus	91.52	0.00e+00	858.00
IUUC-Cin-025712	Ciona intestinalis	43.71	8.00e-37	147.00
IUUC-Csv-025985	Ciona savignyi	38.73	1.00e-34	139.00
IUUC-Dre-027652	Danio rerio	79.73	0.00e+00	703.00
IUUC-Dno-030060	Dasypus novemcinctus	97.63	0.00e+00	721.00
IUUC-Dme-031950	Drosophila melanogaster	36.26	3.00e-49	189.00
IUUC-Ete-032379	Echinops telfairi	83.68	3.00e-167	580.00
IUUC-Eca-034313	Equus caballus	95.79	0.00e+00	716.00
IUUC-Fca-036273	Felis catus	90.04	0.00e+00	820.00
IUUC-Fal-037620	Ficedula albicollis	91.99	0.00e+00	694.00
IUUC-Gmo-038647	Gadus morhua	79.19	7.00e-169	586.00
IUUC-Gga-040735	Gallus gallus	92.37	0.00e+00	691.00
IUUC-Gac-041703	Gasterosteus aculeatus	79.78	0.00e+00	716.00
IUUC-Ggo-045268	Gorilla gorilla	90.94	0.00e+00	816.00
IUUC-Hsa-046127	Homo sapiens	95.64	0.00e+00	815.00
IUUC-Itr-048027	Ictidomys tridecemlineatus	96.50	2.00e-178	618.00
IUUC-Lch-050191	Latimeria chalumnae	88.97	0.00e+00	788.00
IUUC-Loc-052006	Lepisosteus oculatus	85.00	0.00e+00	750.00
IUUC-Laf-053546	Loxodonta africana	90.16	0.00e+00	870.00
IUUC-Mcc-055391	Macaca mulatta	96.83	0.00e+00	703.00
IUUC-Meu-056599	Macropus eugenii	94.79	1.00e-106	380.00
IUUC-Mga-059625	Meleagris gallopavo	89.67	5.00e-101	359.00
IUUC-Mmr-061695	Microcebus murinus	94.39	0.00e+00	884.00
IUUC-Mdo-062960	Monodelphis domestica	93.84	0.00e+00	813.00
IUUC-Mmu-063543	Mus musculus	95.58	0.00e+00	886.00
IUUC-Mpu-066132	Mustela putorius furo	90.49	0.00e+00	809.00
IUUC-Mlu-067070	Myotis lucifugus	96.05	0.00e+00	676.00
IUUC-Nle-069325	Nomascus leucogenys	96.83	0.00e+00	704.00
IUUC-Opr-070537	Ochotona princeps	77.89	5.00e-158	551.00
IUUC-Ont-072184	Oreochromis niloticus	81.67	0.00e+00	728.00
IUUC-Oan-072696	Ornithorhynchus anatinus	90.50	0.00e+00	703.00
IUUC-Ocu-074877	Oryctolagus cuniculus	94.60	0.00e+00	899.00
IUUC-Ola-086632	Oryzias latipes	82.08	0.00e+00	644.00
IUUC-Oga-088050	Otolemur garnettii	93.91	0.00e+00	850.00
IUUC-Oar-089358	Ovis aries	80.00	0.00e+00	741.00
IUUC-Ptr-091497	Pan troglodytes	96.77	0.00e+00	814.00
IUUC-Pan-092813	Papio anubis	95.64	0.00e+00	859.00
IUUC-Psi-093404	Pelodiscus sinensis	93.42	0.00e+00	697.00
IUUC-Pfo-097103	Poecilia formosa	80.77	0.00e+00	718.00
IUUC-Pab-098099	Pongo abelii	95.64	0.00e+00	848.00
IUUC-Pca-100777	Procavia capensis	80.81	4.00e-66	245.00
IUUC-Pva-102912	Pteropus vampyrus	89.58	0.00e+00	915.00
IUUC-Sha-106821	Sarcophilus harrisii	91.83	0.00e+00	807.00
IUUC-Sar-113508	Sorex araneus	98.90	2.00e-106	378.00
IUUC-Ssc-116373	Sus scrofa	93.32	0.00e+00	817.00
IUUC-Tgu-117223	Taeniopygia guttata	92.19	0.00e+00	693.00
IUUC-Tru-118116	Takifugu rubripes	48.54	1.00e-106	379.00
IUUC-Tsy-119525	Tarsius syrichta	97.63	0.00e+00	685.00
IUUC-Tni-119799	Tetraodon nigroviridis	78.66	0.00e+00	719.00
IUUC-Ttr-128611	Tursiops truncatus	88.91	0.00e+00	795.00
IUUC-Vpa-130806	Vicugna pacos	63.06	6.00e-116	410.00
IUUC-Xtr-132913	Xenopus tropicalis	88.06	0.00e+00	776.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence