iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ocu-074628

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAGW02027692

Gene Name

WDR55

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOCUG00000026709.2	ENSOCUT00000031370.2	ENSOCUP00000022218.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.30e-21	75.0	126	157

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sdtllvsGsdDgtikvWDlrt 32
           H +++++l + +++ l++G d g i++WD r+
   Q: 126  HGAPINSLLLvDENVLATGDDTGGIRLWDQRK 157
           999*****77555****************765 PP

Organism

Oryctolagus cuniculus

Protein Sequence
(Fasta)

MDHTCEERPA EAASDEEDPD STEAPARIRD TPEDIVLEAP ASGLAFHPSR DLLAAGDVDG 60
DVFVFSYSCQ EGETKELWSS GHHLKACRAV VFSEDGQKLV TVSKDKAIHF LDVEQGRLEK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATCACA CGTGTGAGGA GAGGCCTGCA GAGGCTGCGA GTGACGAGGA GGACCCTGAC 60
TCCACGGAGG CCCCTGCCCG AATCAGGGAC ACCCCGGAAG ACATTGTGCT GGAGGCGCCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR017422--WDR55

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005730--C:nucleolus
GO:0006364--P:rRNA processing

KEGG

ocu:103347893

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000562	Aegilops tauschii	33.96	4.00e-48	185.00
IUUC-Aml-001768	Ailuropoda melanoleuca	93.21	0.00e+00	735.00
IUUC-Atr-002764	Amborella trichopoda	35.53	3.00e-22	97.40
IUUC-Apl-003880	Anas platyrhynchos	64.69	1.00e-116	414.00
IUUC-Aca-005060	Anolis carolinensis	66.58	4.00e-151	528.00
IUUC-Aly-006484	Arabidopsis lyrata	36.82	2.00e-49	189.00
IUUC-Ath-006652	Arabidopsis thaliana	38.98	6.00e-58	217.00
IUUC-Ago-007944	Ashbya gossypii	21.10	1.00e-08	54.30
IUUC-Bta-013497	Bos taurus	94.32	0.00e+00	716.00
IUUC-Bdi-014378	Brachypodium distachyon	37.91	2.00e-56	212.00
IUUC-Bol-016352	Brassica oleracea	39.32	1.00e-59	223.00
IUUC-Bra-017103	Brassica rapa	39.32	5.00e-60	224.00
IUUC-Cel-018192	Caenorhabditis elegans	23.48	1.00e-13	70.50
IUUC-Cja-018792	Callithrix jacchus	92.13	0.00e+00	689.00
IUUC-Cfa-020739	Canis familiaris	93.89	0.00e+00	712.00
IUUC-Cpo-022331	Cavia porcellus	92.95	0.00e+00	706.00
IUUC-Cre-022921	Chlamydomonas reinhardtii	39.89	2.00e-36	145.00
IUUC-Csa-023414	Chlorocebus sabaeus	93.47	0.00e+00	736.00
IUUC-Cho-024600	Choloepus hoffmanni	92.56	0.00e+00	640.00
IUUC-Cin-025565	Ciona intestinalis	39.02	1.00e-63	236.00
IUUC-Csv-026294	Ciona savignyi	39.25	2.00e-62	232.00
IUUC-Cne-026979	Cryptococcus neoformans	32.99	6.00e-40	157.00
IUUC-Cme-027192	Cyanidioschyzon merolae	24.92	4.00e-20	92.00
IUUC-Dre-028492	Danio rerio	63.97	2.00e-128	452.00
IUUC-Dno-030050	Dasypus novemcinctus	89.89	0.00e+00	645.00
IUUC-Dor-030386	Dipodomys ordii	83.20	4.00e-175	607.00
IUUC-Dme-032012	Drosophila melanogaster	34.88	6.00e-60	224.00
IUUC-Ete-032491	Echinops telfairi	89.15	0.00e+00	684.00
IUUC-Eca-033583	Equus caballus	94.77	0.00e+00	719.00
IUUC-Eeu-034976	Erinaceus europaeus	94.16	1.00e-174	605.00
IUUC-Fca-036417	Felis catus	91.12	0.00e+00	698.00
IUUC-Gmo-039505	Gadus morhua	65.77	3.00e-138	484.00
IUUC-Gga-040732	Gallus gallus	67.60	2.00e-145	508.00
IUUC-Gac-041313	Gasterosteus aculeatus	64.58	3.00e-135	474.00
IUUC-Gma-044122	Glycine max	40.68	2.00e-58	219.00
IUUC-Ggo-044748	Gorilla gorilla	93.47	0.00e+00	736.00
IUUC-Hsa-046943	Homo sapiens	92.95	0.00e+00	733.00
IUUC-Hvu-047659	Hordeum vulgare	37.54	3.00e-55	209.00
IUUC-Itr-048110	Ictidomys tridecemlineatus	93.11	0.00e+00	676.00
IUUC-Lch-050331	Latimeria chalumnae	60.56	1.00e-116	412.00
IUUC-Lpe-051193	Leersia perrieri	39.79	2.00e-59	222.00
IUUC-Loc-051946	Lepisosteus oculatus	67.16	6.00e-135	474.00
IUUC-Laf-054035	Loxodonta africana	91.44	0.00e+00	682.00
IUUC-Mcc-055285	Macaca mulatta	91.89	4.00e-97	346.00
IUUC-Meu-056596	Macropus eugenii	85.34	2.00e-172	598.00
IUUC-Mor-056995	Magnaporthe oryzae	24.90	1.00e-13	70.50
IUUC-Mtr-058637	Medicago truncatula	40.40	3.00e-58	219.00
IUUC-Mga-059839	Meleagris gallopavo	64.39	1.00e-95	344.00
IUUC-Mdo-062868	Monodelphis domestica	83.33	2.00e-175	609.00
IUUC-Mmu-064305	Mus musculus	90.13	0.00e+00	688.00
IUUC-Mac-065041	Musa acuminata	39.08	1.00e-58	219.00
IUUC-Mpu-066779	Mustela putorius furo	93.21	0.00e+00	695.00
IUUC-Mlu-067223	Myotis lucifugus	93.65	0.00e+00	677.00
IUUC-Ncr-068919	Neurospora crassa	25.95	8.00e-09	54.70
IUUC-Nle-069852	Nomascus leucogenys	93.47	0.00e+00	692.00
IUUC-Ont-072452	Oreochromis niloticus	66.67	2.00e-139	488.00
IUUC-Oan-073163	Ornithorhynchus anatinus	83.45	6.00e-66	242.00
IUUC-Oba-075868	Oryza barthii	39.08	1.00e-56	213.00
IUUC-Obr-076768	Oryza brachyantha	39.44	4.00e-58	218.00
IUUC-Ogl-077424	Oryza glaberrima	39.79	3.00e-59	221.00
IUUC-Ogu-078847	Oryza glumaepatula	39.44	5.00e-57	214.00
IUUC-Oin-079495	Oryza indica	39.79	3.00e-59	221.00
IUUC-Olo-080268	Oryza longistaminata	39.44	5.00e-57	214.00
IUUC-Ome-081709	Oryza meridionalis	39.23	1.00e-50	193.00
IUUC-Oni-082749	Oryza nivara	39.79	3.00e-59	221.00
IUUC-Opu-084023	Oryza punctata	33.10	4.00e-40	158.00
IUUC-Oru-084764	Oryza rufipogon	39.44	5.00e-57	214.00
IUUC-Osa-086009	Oryza sativa	39.79	3.00e-59	221.00
IUUC-Ola-086463	Oryzias latipes	61.25	1.00e-129	456.00
IUUC-Olu-087897	Ostreococcus lucimarinus	31.23	5.00e-43	167.00
IUUC-Oga-089114	Otolemur garnettii	91.96	0.00e+00	705.00
IUUC-Ptr-090556	Pan troglodytes	93.21	0.00e+00	735.00
IUUC-Pan-092828	Papio anubis	92.95	0.00e+00	733.00
IUUC-Psi-093609	Pelodiscus sinensis	68.44	6.00e-120	424.00
IUUC-Pma-094413	Petromyzon marinus	56.21	5.00e-102	364.00
IUUC-Ppa-095422	Physcomitrella patens	41.47	2.00e-66	246.00
IUUC-Pfo-096389	Poecilia formosa	65.48	1.00e-131	462.00
IUUC-Pab-098095	Pongo abelii	93.73	0.00e+00	735.00
IUUC-Pop-099612	Populus trichocarpa	38.95	2.00e-54	206.00
IUUC-Pca-100408	Procavia capensis	92.27	0.00e+00	687.00
IUUC-Ppe-101931	Prunus persica	38.98	7.00e-55	207.00
IUUC-Pva-102549	Pteropus vampyrus	92.84	0.00e+00	696.00
IUUC-Rno-105079	Rattus norvegicus	92.29	0.00e+00	704.00
IUUC-Sha-107299	Sarcophilus harrisii	85.88	1.00e-163	570.00
IUUC-Sja-107829	Schizosaccharomyces japonicus	29.45	3.00e-22	99.00
IUUC-Spo-108122	Schizosaccharomyces pombe	29.12	2.00e-27	116.00
IUUC-Smo-109613	Selaginella moellendorffii	39.51	2.00e-50	192.00
IUUC-Sit-110263	Setaria italica	38.73	3.00e-57	215.00
IUUC-Sly-110988	Solanum lycopersicum	37.81	9.00e-54	203.00
IUUC-Stu-112713	Solanum tuberosum	38.16	1.00e-54	206.00
IUUC-Sbi-114617	Sorghum bicolor	37.68	4.00e-55	208.00
IUUC-Sre-115136	Sporisorium reilianum	29.55	2.00e-12	67.00
IUUC-Ssc-116268	Sus scrofa	94.61	0.00e+00	732.00
IUUC-Tgu-116720	Taeniopygia guttata	60.47	4.00e-88	319.00
IUUC-Tru-117977	Takifugu rubripes	66.37	9.00e-132	462.00
IUUC-Tsy-119121	Tarsius syrichta	90.91	1.00e-115	409.00
IUUC-Tni-119904	Tetraodon nigroviridis	69.35	1.00e-134	472.00
IUUC-Tca-121718	Theobroma cacao	41.70	7.00e-61	227.00
IUUC-Tae-124364	Triticum aestivum	37.89	2.00e-55	209.00
IUUC-Tme-126922	Tuber melanosporum	21.61	1.00e-11	65.10
IUUC-Tbe-127276	Tupaia belangeri	92.93	6.00e-156	542.00
IUUC-Uma-129505	Ustilago maydis	31.71	3.00e-13	69.70
IUUC-Vpa-130276	Vicugna pacos	95.62	1.00e-139	488.00
IUUC-Vvi-131377	Vitis vinifera	39.93	8.00e-58	219.00
IUUC-Xtr-132529	Xenopus tropicalis	69.39	5.00e-147	514.00
IUUC-Xma-134177	Xiphophorus maculatus	65.18	2.00e-124	438.00
IUUC-Yli-134665	Yarrowia lipolytica	24.05	3.00e-09	56.20

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence