iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099785

Ensembl Protein ID

POPTR_0004s02140.1

UniProt Accession

U5GE45; U5GE45_POPTR

Genbank Protein ID

ERP61740.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000340

Gene Name

POPTRDRAFT_555370; POPTR_0004s02140g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0004s02140	POPTR_0004s02140.1	POPTR_0004s02140.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UBQ/UBQ_Other	3.50e-11	43.9	3	57

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UBQ/UBQ_Other

   S: 14   tlkvnpsdtVaeLKekiekk.lgippeqqrLiykGkiLeddktLadyglkdgsti 67
           +++++ ++tV++LKe +++  +++ +e q L++ G  L+d+ +La+y l  +s i
   Q: 3    PMELPDDATVKDLKEAVHDMfTSYSVENQELLFNGLFLQDNTKLASYRLVSDSEI 57
           57877788************9**************************99777776 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MIPMELPDDA TVKDLKEAVH DMFTSYSVEN QELLFNGLFL QDNTKLASYR LVSDSEITLR 60
LLFTIVIIGK NPDGQYQRYE VRAHRNNYVG DLKLKLSEDH GLDITNIRLQ MGPESYLLDR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GACATTGAAG GTCAAGGTTG TTGCTGATGG CACTACAATG ATCCCTATGG AACTTCCTGA 60
TGATGCAACT GTTAAGGACC TGAAAGAGGC AGTCCATGAT ATGTTCACCT CTTATTCTGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom

PROSITE

PS50053--UBIQUITIN_2

Pfam

PF00240--ubiquitin

Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0005686--C:U2 snRNP
GO:0071004--C:U2-type prespliceosome
GO:0003723--F:RNA binding
GO:0000389--P:mRNA 3'-splice site recognition
GO:0000381--P:regulation of alternative mRNA splicing, via spliceosome

KEGG

pop:POPTR_0004s02140g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Cin-025141	Ciona intestinalis	30.99	1.00e-03	35.80

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence