iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Dre-027950

Ensembl Protein ID

ENSDARP00000064110.5

UniProt Accession

F1RA98; F1RA98_DANRE

Genbank Protein ID

ENSDARP00000064110

Protein Name

40S ribosomal protein S30

Genbank Nucleotide ID

BX248510

Gene Name

faub

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000043663.5	ENSDART00000064111.5	ENSDARP00000064110.5

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UBQ/UBQ_Other	6.70e-08	33.2	10	67

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UBQ/UBQ_Other

   S: 12   eltlkvnpsdtVaeLKekiekklgippeqqrLiykGkiLeddktLadyglkdgstihl 69
            +++++n s+tVa +K +ie ++g+ +++q + ++G++Ledd  + + g+ + +t+ +
   Q: 10   LHSVQLNGSETVAHIKAQIEALEGLACDDQIISLSGIPLEDDALICQSGIEEFNTLEV 67
           688999************************************9888888887777766 PP

Organism

Danio rerio

Protein Sequence
(Fasta)

MQLFVRGQSL HSVQLNGSET VAHIKAQIEA LEGLACDDQI ISLSGIPLED DALICQSGIE 60
EFNTLEVSSR LLGGKVHGSL ARAGKVRGQT PKVDKQEKRK KRTGRAKRRI QYNRRFVNVV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCAGAACACT TTCTAGAAAA GCGAAATACT TCAGTTCAGG CTGTTCATGT CGTGTTTTGT 60
GCTCGTACGA ATCCAAATCG ATATCTGTGA GTACTCCTTT AACATTCAAG TAATGTTATA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0687--Ribonucleoprotein
KW-0689--Ribosomal protein

Interpro

IPR006846--Ribosomal_S30
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom

PROSITE

PS50053--UBIQUITIN_2

Pfam

PF04758--Ribosomal_S30
PF00240--ubiquitin

SMART

SM00213--UBQ

Gene Ontology

GO:0005840--C:ribosome
GO:0003735--F:structural constituent of ribosome
GO:0006412--P:translation

KEGG

dre:550564

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000894	Aegilops tauschii	74.58	4.00e-20	89.00
IUUC-Bgr-012187	Blumeria graminis	68.85	5.00e-13	65.50
IUUC-Bdi-014353	Brachypodium distachyon	74.58	4.00e-20	89.00
IUUC-Cre-022769	Chlamydomonas reinhardtii	76.67	2.00e-21	93.60
IUUC-Cin-025323	Ciona intestinalis	60.15	3.00e-44	170.00
IUUC-Cme-027291	Cyanidioschyzon merolae	70.00	1.00e-17	80.90
IUUC-Dse-031318	Dothistroma septosporum	68.85	5.00e-13	65.50
IUUC-Ete-032553	Echinops telfairi	71.43	2.00e-52	197.00
IUUC-Fox-038012	Fusarium oxysporum	67.21	4.00e-16	75.50
IUUC-Fso-038410	Fusarium solani	67.21	6.00e-16	75.10
IUUC-Gga-041192	Gallus gallus	71.97	1.00e-43	168.00
IUUC-Hvu-047232	Hordeum vulgare	74.58	4.00e-20	89.00
IUUC-Lch-049631	Latimeria chalumnae	70.68	5.00e-43	166.00
IUUC-Mtr-057879	Medicago truncatula	72.88	9.00e-20	87.80
IUUC-Mvi-060233	Microbotryum violaceum	71.19	4.00e-12	62.40
IUUC-Mac-064868	Musa acuminata	69.49	1.00e-17	80.90
IUUC-Pte-104130	Pyrenophora teres	67.21	7.00e-13	65.10
IUUC-Tgu-116647	Taeniopygia guttata	68.42	3.00e-36	143.00
IUUC-Tae-124773	Triticum aestivum	74.58	9.00e-20	92.80

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence