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Tag Content
UUCD2 ID IUUC-Dre-028023
UUCD1 version UUC-DaR-00238
Ensembl Protein ID ENSDARP00000093768.4
UniProt Accession E7EXE9; E7EXE9_DANRE
Genbank Protein ID ENSDARP00000093768
Protein Name Retinoblastoma-binding protein 6
Genbank Nucleotide ID BX255942
Gene Name rbbp6
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSDARG00000037919.8 ENSDART00000055266.8 ENSDARP00000055265.7
ENSDARG00000037919.8 ENSDART00000150918.1 ENSDARP00000125662.1
ENSDARG00000037919.8 ENSDART00000102994.4 ENSDARP00000093768.4
Status Unreviewed
Classification
Family E-Value Score Start End
E3 activity/RING/U-box 4.40e-10 40.4 251 324
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 activity/RING/U-box
   S: 2    vpeeflCpIslelMrdPvvlp.sGitydrssIekwl.asggktcPvtrqpl.teedlvPnltlrrliqawceen 72
           vp+e+lC I ++lM+d vv+p +G +y   +I+ +l +s ++ cP+++q+  +++ l+ n++lr+ ++++ +e 
   Q: 251  VPDELLCLICKDLMTDAVVIPcCGNSYCDDCIRTCLlESEEHVCPTCKQSDvSPDALIANKFLRQAVNNFKNET 324
           8***********************************5555559****9986599999*********99998765 PP
   
Organism Danio rerio
Protein Sequence
(Fasta)
MSCVHYKFSS KLNYDTVTFD GLHITLSDLK RQIMGREKLK AADCDLQITN AQTKEEYTDD 60
EALIPKNSSV IIRRIPIGGL KSTSKTYVID RSEPSGSSKA IDSSSISLAL LSKTANLAET 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Dre-028023|E3,U-box|Danio rerio
Please wait for a moment...
Nucleotide Sequence
(Fasta)
CTCCTAGTAA CAGCTTTATT CTTTGCCCCT GCGTTTTCTG CGGAAACCCC TAGTGTGCGT 60
AAAGTCAACG GGTTGTTTTC GATCACGGAC GTGAGTCAGT ACGACAAAAC TGTGATTTAA 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Dre-028023|E3,U-box|Danio rerio
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
Interpro

IPR014891--DWNN_domain
IPR033489--RBBP6
IPR003613--Ubox_domain
IPR025829--Zn_knuckle_CX2CX3GHX4C
IPR001878--Znf_CCHC
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
PROSITE

PS51282--DWNN
PS51698--U_BOX
PS50158--ZF_CCHC
PS50089--ZF_RING_2
Pfam

PF08783--DWNN
PF04564--U-box
PF13696--zf-CCHC_2
SMART

SM01180--DWNN
SM00343--ZnF_C2HC
Gene Ontology

GO:0005634--C:nucleus
GO:0003676--F:nucleic acid binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0006397--P:mRNA processing
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000195 Aegilops tauschii 35.63 6.00e-14 73.20
IUUC-Aml-001655 Ailuropoda melanoleuca 62.00 1.00e-155 545.00
IUUC-Atr-002768 Amborella trichopoda 36.78 2.00e-14 74.30
IUUC-Apl-004100 Anas platyrhynchos 56.16 1.00e-129 458.00
IUUC-Aca-004345 Anolis carolinensis 76.86 6.00e-86 312.00
IUUC-Aly-006444 Arabidopsis lyrata 36.78 2.00e-23 104.00
IUUC-Ath-006684 Arabidopsis thaliana 35.29 2.00e-21 98.20
IUUC-Ago-007949 Ashbya gossypii 29.72 2.00e-33 136.00
IUUC-Acl-008118 Aspergillus clavatus 28.64 1.00e-26 115.00
IUUC-Afl-008408 Aspergillus flavus 31.88 8.00e-16 78.60
IUUC-Afu-008777 Aspergillus fumigatus 32.09 8.00e-35 142.00
IUUC-Ani-009426 Aspergillus nidulans 29.11 2.00e-36 147.00
IUUC-Ang-009735 Aspergillus niger 30.58 1.00e-32 134.00
IUUC-Aor-010213 Aspergillus oryzae 31.81 1.00e-33 138.00
IUUC-Ate-010474 Aspergillus terreus 29.89 8.00e-32 132.00
IUUC-Ame-010679 Astyanax mexicanus 86.39 1.00e-165 578.00
IUUC-Bgr-012229 Blumeria graminis 30.93 2.00e-33 137.00
IUUC-Bta-012672 Bos taurus 59.26 3.00e-157 550.00
IUUC-Bci-013880 Botrytis cinerea 31.03 8.00e-32 132.00
IUUC-Bdi-014250 Brachypodium distachyon 28.27 2.00e-33 138.00
IUUC-Bol-015602 Brassica oleracea 37.36 9.00e-24 105.00
IUUC-Bra-016670 Brassica rapa 37.36 1.00e-23 105.00
IUUC-Cel-018532 Caenorhabditis elegans 37.01 3.00e-53 204.00
IUUC-Cja-018843 Callithrix jacchus 58.80 8.00e-136 479.00
IUUC-Cfa-021107 Canis familiaris 60.56 2.00e-156 548.00
IUUC-Cre-022712 Chlamydomonas reinhardtii 41.33 1.00e-11 64.70
IUUC-Csa-023397 Chlorocebus sabaeus 60.67 5.00e-157 549.00
IUUC-Cho-024327 Choloepus hoffmanni 61.99 2.00e-154 540.00
IUUC-Cin-025439 Ciona intestinalis 46.72 3.00e-44 171.00
IUUC-Csv-026162 Ciona savignyi 52.13 9.00e-52 196.00
IUUC-Cgl-026629 Colletotrichum gloeosporioides 29.03 1.00e-26 114.00
IUUC-Cne-026921 Cryptococcus neoformans 33.33 3.00e-24 107.00
IUUC-Cme-027244 Cyanidioschyzon merolae 51.28 1.00e-18 89.00
IUUC-Dno-029430 Dasypus novemcinctus 57.51 6.00e-152 532.00
IUUC-Dor-030406 Dipodomys ordii 56.78 2.00e-102 367.00
IUUC-Dse-031312 Dothistroma septosporum 31.82 7.00e-36 145.00
IUUC-Dme-032133 Drosophila melanogaster 44.38 2.00e-76 281.00
IUUC-Ete-032466 Echinops telfairi 51.30 3.00e-78 287.00
IUUC-Eca-033447 Equus caballus 83.07 6.00e-139 486.00
IUUC-Eeu-034677 Erinaceus europaeus 57.05 1.00e-120 428.00
IUUC-Fca-035439 Felis catus 58.19 8.00e-154 538.00
IUUC-Fal-037230 Ficedula albicollis 73.93 1.00e-153 538.00
IUUC-Fox-037976 Fusarium oxysporum 30.84 5.00e-33 135.00
IUUC-Fso-038202 Fusarium solani 29.01 7.00e-34 139.00
IUUC-Gmo-039390 Gadus morhua 74.02 4.00e-90 323.00
IUUC-Ggr-040035 Gaeumannomyces graminis 28.57 3.00e-29 123.00
IUUC-Gga-040908 Gallus gallus 60.14 2.00e-161 564.00
IUUC-Gac-041718 Gasterosteus aculeatus 72.38 4.00e-89 320.00
IUUC-Gma-044229 Glycine max 33.94 5.00e-23 103.00
IUUC-Ggo-044567 Gorilla gorilla 61.28 3.00e-160 560.00
IUUC-Hsa-046849 Homo sapiens 61.47 3.00e-157 550.00
IUUC-Hvu-047050 Hordeum vulgare 26.24 6.00e-25 109.00
IUUC-Itr-048832 Ictidomys tridecemlineatus 61.19 1.00e-157 551.00
IUUC-Kpa-049323 Komagataella pastoris 30.89 1.00e-32 134.00
IUUC-Lch-050524 Latimeria chalumnae 79.19 2.00e-157 550.00
IUUC-Lpe-050947 Leersia perrieri 28.80 5.00e-27 116.00
IUUC-Loc-052709 Lepisosteus oculatus 66.23 2.00e-168 587.00
IUUC-Lma-053186 Leptosphaeria maculans 30.99 1.00e-30 128.00
IUUC-Laf-054472 Loxodonta africana 61.65 6.00e-156 546.00
IUUC-Mcc-055743 Macaca mulatta 60.67 7.00e-157 549.00
IUUC-Meu-056399 Macropus eugenii 52.77 1.00e-129 458.00
IUUC-Mor-057073 Magnaporthe oryzae 29.48 8.00e-31 129.00
IUUC-Mpo-057378 Magnaporthe poae 29.46 1.00e-29 124.00
IUUC-Mtr-058761 Medicago truncatula 30.12 3.00e-31 130.00
IUUC-Mla-058840 Melampsora laricipopulina 38.26 2.00e-24 108.00
IUUC-Mga-060129 Meleagris gallopavo 57.23 6.00e-124 439.00
IUUC-Mvi-060424 Microbotryum violaceum 32.91 9.00e-23 102.00
IUUC-Mmr-061295 Microcebus murinus 61.55 3.00e-159 556.00
IUUC-Mdo-062295 Monodelphis domestica 54.34 7.00e-152 532.00
IUUC-Mmu-064009 Mus musculus 62.19 2.00e-160 560.00
IUUC-Mac-065479 Musa acuminata 34.44 5.00e-21 96.70
IUUC-Mpu-065875 Mustela putorius furo 61.50 3.00e-160 560.00
IUUC-Mlu-066941 Myotis lucifugus 59.68 4.00e-163 570.00
IUUC-Nfi-068518 Neosartorya fischeri 33.52 1.00e-35 145.00
IUUC-Ncr-068886 Neurospora crassa 28.85 6.00e-30 125.00
IUUC-Nle-069717 Nomascus leucogenys 61.27 3.00e-157 550.00
IUUC-Opr-070280 Ochotona princeps 73.40 3.00e-140 493.00
IUUC-Ont-071462 Oreochromis niloticus 69.40 8.00e-150 525.00
IUUC-Oan-073300 Ornithorhynchus anatinus 56.08 5.00e-152 533.00
IUUC-Ocu-074124 Oryctolagus cuniculus 61.42 2.00e-157 550.00
IUUC-Oba-075756 Oryza barthii 29.26 1.00e-27 118.00
IUUC-Obr-076580 Oryza brachyantha 31.38 1.00e-29 125.00
IUUC-Ogl-077759 Oryza glaberrima 30.16 8.00e-34 139.00
IUUC-Ogu-078657 Oryza glumaepatula 29.10 2.00e-28 120.00
IUUC-Oin-079481 Oryza indica 30.55 1.00e-30 128.00
IUUC-Olo-081062 Oryza longistaminata 34.90 4.00e-20 93.60
IUUC-Ome-081813 Oryza meridionalis 30.07 2.00e-27 118.00
IUUC-Oni-083007 Oryza nivara 29.10 1.00e-27 118.00
IUUC-Opu-083385 Oryza punctata 29.33 7.00e-27 116.00
IUUC-Oru-084861 Oryza rufipogon 29.10 1.00e-27 118.00
IUUC-Osa-085896 Oryza sativa 30.16 8.00e-34 138.00
IUUC-Ola-086693 Oryzias latipes 62.50 2.00e-130 460.00
IUUC-Olu-087631 Ostreococcus lucimarinus 50.00 2.00e-15 73.60
IUUC-Oga-088262 Otolemur garnettii 60.81 2.00e-156 547.00
IUUC-Oar-089658 Ovis aries 59.36 2.00e-157 551.00
IUUC-Ptr-091311 Pan troglodytes 62.08 9.00e-159 555.00
IUUC-Pan-091925 Papio anubis 60.67 1.00e-156 548.00
IUUC-Psi-093605 Pelodiscus sinensis 73.54 1.00e-117 419.00
IUUC-Pma-094163 Petromyzon marinus 73.08 9.00e-90 322.00
IUUC-Pno-094790 Phaeosphaeria nodorum 35.62 3.00e-18 87.00
IUUC-Ppa-095943 Physcomitrella patens 35.50 4.00e-23 103.00
IUUC-Pfo-096581 Poecilia formosa 73.21 2.00e-139 491.00
IUUC-Pab-098229 Pongo abelii 61.27 2.00e-157 551.00
IUUC-Pop-099598 Populus trichocarpa 31.59 1.00e-36 149.00
IUUC-Pca-100875 Procavia capensis 49.31 2.00e-67 252.00
IUUC-Ppe-101658 Prunus persica 49.33 4.00e-16 80.50
IUUC-Pva-102343 Pteropus vampyrus 60.15 5.00e-156 546.00
IUUC-Pgr-103275 Puccinia graminis 36.42 2.00e-18 88.20
IUUC-Ptt-104004 Puccinia triticina 33.33 2.00e-09 57.40
IUUC-Pte-104161 Pyrenophora teres 29.63 7.00e-26 112.00
IUUC-Pyt-104576 Pyrenophora triticirepentis 30.37 2.00e-26 114.00
IUUC-Rno-105264 Rattus norvegicus 61.57 5.00e-159 556.00
IUUC-Sce-106138 Saccharomyces cerevisiae 28.25 4.00e-34 139.00
IUUC-Sha-107497 Sarcophilus harrisii 61.86 1.00e-157 551.00
IUUC-Sja-107991 Schizosaccharomyces japonicus 33.33 4.00e-42 166.00
IUUC-Spo-108257 Schizosaccharomyces pombe 31.23 1.00e-41 164.00
IUUC-Ssl-108581 Sclerotinia sclerotiorum 29.60 1.00e-32 134.00
IUUC-Smo-109324 Selaginella moellendorffii 30.22 2.00e-24 106.00
IUUC-Sit-109920 Setaria italica 27.88 3.00e-30 127.00
IUUC-Sly-111616 Solanum lycopersicum 36.21 2.00e-23 104.00
IUUC-Stu-112648 Solanum tuberosum 33.33 8.00e-10 58.50
IUUC-Sar-113120 Sorex araneus 55.34 1.00e-105 379.00
IUUC-Sbi-113881 Sorghum bicolor 30.48 9.00e-33 135.00
IUUC-Sre-115127 Sporisorium reilianum 37.64 6.00e-32 132.00
IUUC-Ssc-116147 Sus scrofa 59.19 3.00e-157 550.00
IUUC-Tgu-117215 Taeniopygia guttata 73.56 2.00e-121 431.00
IUUC-Tru-118525 Takifugu rubripes 65.59 4.00e-136 478.00
IUUC-Tsy-119160 Tarsius syrichta 61.18 3.00e-158 553.00
IUUC-Tni-119816 Tetraodon nigroviridis 73.04 7.00e-88 316.00
IUUC-Tca-121727 Theobroma cacao 30.16 1.00e-28 121.00
IUUC-Tre-122181 Trichoderma reesei 30.46 4.00e-33 136.00
IUUC-Tvi-122316 Trichoderma virens 29.14 3.00e-33 137.00
IUUC-Tae-125227 Triticum aestivum 36.21 3.00e-15 77.40
IUUC-Tur-126827 Triticum urartu 36.21 3.00e-14 73.90
IUUC-Tme-126984 Tuber melanosporum 31.55 2.00e-43 171.00
IUUC-Tbe-127263 Tupaia belangeri 35.17 4.00e-48 187.00
IUUC-Ttr-128498 Tursiops truncatus 59.26 7.00e-158 552.00
IUUC-Uma-129457 Ustilago maydis 39.33 4.00e-32 132.00
IUUC-Vda-129986 Verticillium dahliae 28.82 5.00e-33 135.00
IUUC-Vpa-130795 Vicugna pacos 78.86 2.00e-93 338.00
IUUC-Vvi-131146 Vitis vinifera 48.00 4.00e-16 80.50
IUUC-Xtr-132789 Xenopus tropicalis 77.24 7.00e-151 529.00
IUUC-Xma-133011 Xiphophorus maculatus 71.68 6.00e-137 481.00
IUUC-Yli-134516 Yarrowia lipolytica 30.17 3.00e-34 139.00
IUUC-Zma-134699 Zea mays 29.60 4.00e-32 133.00
Created Date 25-Jun-2017

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