iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Apl-004049

Ensembl Protein ID

ENSAPLP00000006894.1

UniProt Accession

U3II22; U3II22_ANAPL

Genbank Protein ID

ENSAPLP00000006894

Protein Name

WD repeat-containing protein 35

Genbank Nucleotide ID

ADON01041377

Gene Name

WDR35

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSAPLG00000007231.1	ENSAPLT00000007545.1	ENSAPLP00000006894.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.10e-06	25.8	17	49

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 6    vtclaf..sdtllvsGsdDgtikvWDlrtgvll 36
            +c+++  +++++++G+ Dg +kv  l t+++l
   Q: 17   LRCISWnkNEGFIACGGEDGLLKVLKLETQTVL 49
           68****9666***************99998765 PP

Organism

Anas platyrhynchos

Protein Sequence
(Fasta)

EFIYLCKKIA VPGNVQLRCI SWNKNEGFIA CGGEDGLLKV LKLETQTVLD EAKIKGLAAP 60
SNLSMNQTLE GHSGSVQVVT WNEQYHKLTT SDQNGLIIVW MMYKGAWYEE MINNRNKSVV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAGTTCATCT ACCTGTGCAA GAAGGTGCTG CCGGGTTGGG TTATAAGCCT GACTGACTGC 60
TGTTGTCGTG CCGGGTGTGC TAATGTGTCC GTAGTTCGCT GCTGCGTTCT CATAGGTGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0966--Cell projection
KW-0969--Cilium
KW-0970--Cilium biogenesis/degradation
KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0206--Cytoskeleton
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR011990--TPR-like_helical_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
IPR017233--WDR35

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005930--C:axoneme
GO:0005813--C:centrosome
GO:0036064--C:ciliary basal body
GO:0005737--C:cytoplasm
GO:0030991--C:intraciliary transport particle A
GO:0060271--P:cilium assembly
GO:0035721--P:intraciliary retrograde transport

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Cin-025165	Ciona intestinalis	66.57	2.00e-130	458.00
IUUC-Dno-029699	Dasypus novemcinctus	86.53	0.00e+00	744.00
IUUC-Dme-032005	Drosophila melanogaster	47.22	0.00e+00	1041.00
IUUC-Gmo-038607	Gadus morhua	75.04	0.00e+00	1866.00
IUUC-Gac-041560	Gasterosteus aculeatus	76.12	0.00e+00	1888.00
IUUC-Lch-050449	Latimeria chalumnae	82.32	0.00e+00	2050.00
IUUC-Psi-093525	Pelodiscus sinensis	88.66	0.00e+00	2187.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence