iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Loc-052196

Ensembl Protein ID

ENSLOCP00000014246.1

UniProt Accession

W5N0T7; W5N0T7_LEPOC

Genbank Protein ID

ENSLOCP00000014246

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AHAT01003694

Gene Name

WDR25

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLOCG00000011593.1	ENSLOCT00000014275.1	ENSLOCP00000014246.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.80e-21	74.5	150	182

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sd..tllvsGsdDgtikvWD 29
           H+++v+ +++   +   +ll+s+s D+t+kvWD
   Q: 150  HQGPVNNVQWcpvPQfsHLLLSASMDKTVKVWD 182
           9***********9444489************** PP

Organism

Lepisosteus oculatus

Protein Sequence
(Fasta)

MDVKAVSHGD AFCSASALQP RGTEIPHRDL PPDWPQEISS TPWAAPVGLK SSTQGLQSSA 60
LLSRGLGDAI ARKRPQVAVG AVKPYVPKRQ RMGQMPEHDT ETALQTEIPA AGATDSKLLT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGCTGAACCA GGAAGTGAAG TTACGTGTGG TTGAGTGATT CGAGCGTGCA GCATCTCCGG 60
TTAGTCCAAA TTTCAGTCTC ATAAGAGCAT GTAGGTACTG TATGATTGAC ACGACTAATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR013979--TIF_beta_prop-like
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08662--eIF2A
PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001588	Ailuropoda melanoleuca	54.92	1.00e-118	420.00
IUUC-Atr-003155	Amborella trichopoda	37.03	1.00e-68	253.00
IUUC-Apl-003544	Anas platyrhynchos	72.38	2.00e-96	344.00
IUUC-Aly-006510	Arabidopsis lyrata	35.09	4.00e-71	261.00
IUUC-Ath-007329	Arabidopsis thaliana	36.70	3.00e-73	269.00
IUUC-Ame-010607	Astyanax mexicanus	73.42	1.00e-93	335.00
IUUC-Bta-013542	Bos taurus	55.32	6.00e-119	421.00
IUUC-Bdi-014736	Brachypodium distachyon	36.51	1.00e-75	276.00
IUUC-Bol-016112	Brassica oleracea	37.30	2.00e-74	273.00
IUUC-Bra-016685	Brassica rapa	37.77	1.00e-73	270.00
IUUC-Cja-018883	Callithrix jacchus	52.22	2.00e-115	409.00
IUUC-Cfa-021278	Canis familiaris	55.04	5.00e-120	424.00
IUUC-Cpo-022449	Cavia porcellus	60.37	6.00e-114	403.00
IUUC-Csa-023916	Chlorocebus sabaeus	55.61	1.00e-115	409.00
IUUC-Cin-025210	Ciona intestinalis	35.52	2.00e-41	162.00
IUUC-Csv-026371	Ciona savignyi	34.78	2.00e-43	169.00
IUUC-Dno-029053	Dasypus novemcinctus	48.40	3.00e-50	192.00
IUUC-Dor-030299	Dipodomys ordii	43.16	2.00e-47	182.00
IUUC-Eca-033484	Equus caballus	53.47	1.00e-114	407.00
IUUC-Fca-035673	Felis catus	55.56	3.00e-119	422.00
IUUC-Fal-036795	Ficedula albicollis	65.34	1.00e-135	475.00
IUUC-Gmo-039062	Gadus morhua	66.05	1.00e-108	385.00
IUUC-Gga-040773	Gallus gallus	67.41	1.00e-114	405.00
IUUC-Gac-042364	Gasterosteus aculeatus	69.00	4.00e-113	400.00
IUUC-Gma-043100	Glycine max	37.03	3.00e-68	251.00
IUUC-Ggo-045220	Gorilla gorilla	52.23	6.00e-115	407.00
IUUC-Hsa-046511	Homo sapiens	55.11	1.00e-114	406.00
IUUC-Hvu-047431	Hordeum vulgare	38.17	3.00e-71	261.00
IUUC-Lch-049590	Latimeria chalumnae	67.90	8.00e-115	406.00
IUUC-Lpe-050810	Leersia perrieri	43.12	2.00e-59	222.00
IUUC-Laf-053481	Loxodonta africana	50.71	1.00e-68	253.00
IUUC-Mcc-055622	Macaca mulatta	53.96	4.00e-115	408.00
IUUC-Mtr-058041	Medicago truncatula	38.85	6.00e-67	248.00
IUUC-Mga-060149	Meleagris gallopavo	72.73	5.00e-97	346.00
IUUC-Mmr-061552	Microcebus murinus	51.93	1.00e-114	406.00
IUUC-Mdo-061969	Monodelphis domestica	54.01	3.00e-135	474.00
IUUC-Mmu-063343	Mus musculus	52.64	1.00e-113	403.00
IUUC-Mac-065079	Musa acuminata	37.17	1.00e-64	240.00
IUUC-Mpu-065949	Mustela putorius furo	54.65	2.00e-97	349.00
IUUC-Mlu-067523	Myotis lucifugus	55.06	7.00e-90	324.00
IUUC-Nle-069645	Nomascus leucogenys	52.73	3.00e-67	249.00
IUUC-Ont-072361	Oreochromis niloticus	58.33	2.00e-140	492.00
IUUC-Ocu-074916	Oryctolagus cuniculus	52.26	2.00e-67	249.00
IUUC-Oba-075367	Oryza barthii	39.94	3.00e-64	239.00
IUUC-Obr-076738	Oryza brachyantha	41.09	7.00e-71	261.00
IUUC-Ogu-078590	Oryza glumaepatula	39.63	1.00e-63	237.00
IUUC-Oin-079678	Oryza indica	40.12	1.00e-69	256.00
IUUC-Olo-080453	Oryza longistaminata	41.88	1.00e-66	246.00
IUUC-Ome-081794	Oryza meridionalis	39.27	9.00e-53	200.00
IUUC-Oni-082432	Oryza nivara	40.12	1.00e-69	256.00
IUUC-Opu-083897	Oryza punctata	37.47	2.00e-69	256.00
IUUC-Oru-085068	Oryza rufipogon	38.87	4.00e-63	235.00
IUUC-Osa-085805	Oryza sativa	39.83	2.00e-69	256.00
IUUC-Ola-087567	Oryzias latipes	69.49	6.00e-119	419.00
IUUC-Oga-088168	Otolemur garnettii	56.68	2.00e-119	422.00
IUUC-Oar-090158	Ovis aries	52.85	7.00e-108	384.00
IUUC-Ptr-090913	Pan troglodytes	44.89	6.00e-87	314.00
IUUC-Pan-092157	Papio anubis	55.61	8.00e-116	410.00
IUUC-Psi-093817	Pelodiscus sinensis	65.19	3.00e-112	397.00
IUUC-Pma-094263	Petromyzon marinus	58.66	4.00e-62	230.00
IUUC-Ppa-095302	Physcomitrella patens	39.02	1.00e-74	273.00
IUUC-Pfo-097526	Poecilia formosa	60.36	4.00e-141	494.00
IUUC-Pab-098152	Pongo abelii	55.01	2.00e-101	362.00
IUUC-Pop-099987	Populus trichocarpa	40.45	2.00e-73	269.00
IUUC-Ppe-101575	Prunus persica	39.42	9.00e-73	267.00
IUUC-Pva-102942	Pteropus vampyrus	55.81	1.00e-118	419.00
IUUC-Rno-104857	Rattus norvegicus	55.50	6.00e-115	407.00
IUUC-Sha-106763	Sarcophilus harrisii	55.01	4.00e-130	458.00
IUUC-Sit-110488	Setaria italica	38.46	1.00e-70	259.00
IUUC-Sly-110893	Solanum lycopersicum	34.69	6.00e-66	244.00
IUUC-Stu-112566	Solanum tuberosum	35.92	3.00e-65	242.00
IUUC-Sar-113617	Sorex araneus	45.12	7.00e-68	251.00
IUUC-Sbi-114566	Sorghum bicolor	40.51	4.00e-72	265.00
IUUC-Tgu-117015	Taeniopygia guttata	65.64	2.00e-135	474.00
IUUC-Tsy-119467	Tarsius syrichta	44.21	3.00e-69	255.00
IUUC-Tca-121587	Theobroma cacao	37.53	2.00e-71	263.00
IUUC-Tae-123717	Triticum aestivum	39.62	3.00e-72	265.00
IUUC-Tbe-127502	Tupaia belangeri	46.60	1.00e-88	320.00
IUUC-Ttr-129033	Tursiops truncatus	56.95	3.00e-119	422.00
IUUC-Vvi-131505	Vitis vinifera	37.46	1.00e-71	263.00
IUUC-Xtr-132851	Xenopus tropicalis	63.46	3.00e-84	303.00
IUUC-Xma-133463	Xiphophorus maculatus	60.62	8.00e-141	493.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence