iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMUSG00000040767.10	ENSMUST00000039601.9	ENSMUSP00000046654.3
ENSMUSG00000040767.10	ENSMUST00000149043.2	ENSMUSP00000119306.1
ENSMUSG00000040767.10	ENSMUST00000121182.1	ENSMUSP00000112483.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress	GXD
DNA & RNA Element
microRNA	TRANSFAC	RAID2
Protein-protein Interaction
IID
Protein 3D Structure
PDB	MMDB
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UBQ/UBQ_Other	9.00e-06	26.6	32	113

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UBQ/UBQ_Other

   S: 1    vqvtvksldgseltlkvnpsdtVaeLKeki..............ekk.lgippeqqrLiykGkiL.eddktLadyglkdgst 66
           ++v+v  +dg ++++ v   +tV++LK+ i              ++  +++ ++  +L+ +G+ L ed k+L dyg+++++ 
   Q: 32   MTVRVCKMDGEVMPVVVVQNATVLDLKKAIqryvqlkqereggvQHIsWSYVWRTYHLTSAGEKLtEDRKKLRDYGIRNRDE 113
           67888899**************************99999999986666999988889999999999***********99886 PP

Organism

Mus musculus

Protein Sequence
(Fasta)

MVVQDPLLCD LPIQVTLEEV NSQIALEYGQ AMTVRVCKMD GEVMPVVVVQ NATVLDLKKA 60
IQRYVQLKQE REGGVQHISW SYVWRTYHLT SAGEKLTEDR KKLRDYGIRN RDEVSFIKKL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACAATCACTG CGCACGCGCC TTTTGCTTAT CAACCTGGAA GGCAGGGCAG GCTGGAGGAG 60
CGCCGGAAAG CAACACTAGT CTAGTAGTAG GCAGTCCTGG AGGACCCGGA GGCTGAGGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0002--3D-structure
KW-0181--Complete proteome
KW-0507--mRNA processing
KW-0508--mRNA splicing
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0747--Spliceosome

Interpro

IPR029071--Ubiquitin-rel_dom

Gene Ontology

GO:0005829--C:cytosol
GO:0045171--C:intercellular bridge
GO:0005654--C:nucleoplasm
GO:0005634--C:nucleus
GO:0005689--C:U12-type spliceosomal complex
GO:0006397--P:mRNA processing
GO:0008380--P:RNA splicing

KEGG

mmu:78372

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bta-013418	Bos taurus	98.37	8.00e-69	251.00
IUUC-Bci-013773	Botrytis cinerea	41.94	5.50e-02	31.60
IUUC-Cja-019542	Callithrix jacchus	98.37	1.00e-68	251.00
IUUC-Cpo-021791	Cavia porcellus	100.00	2.00e-69	254.00
IUUC-Cin-025440	Ciona intestinalis	61.48	1.00e-40	158.00
IUUC-Dre-028229	Danio rerio	79.67	4.00e-58	216.00
IUUC-Ete-032951	Echinops telfairi	25.00	4.90e+00	25.80
IUUC-Eca-033616	Equus caballus	98.37	6.00e-69	252.00
IUUC-Gac-041795	Gasterosteus aculeatus	77.87	2.00e-55	207.00
IUUC-Ggo-045439	Gorilla gorilla	98.37	2.00e-68	251.00
IUUC-Hsa-045948	Homo sapiens	98.37	1.00e-68	251.00
IUUC-Itr-048331	Ictidomys tridecemlineatus	97.56	2.00e-68	251.00
IUUC-Lch-050068	Latimeria chalumnae	81.30	8.00e-58	215.00
IUUC-Mcc-054809	Macaca mulatta	97.56	2.00e-68	250.00
IUUC-Mac-065187	Musa acuminata	35.16	2.00e-09	55.80
IUUC-Ocu-074308	Oryctolagus cuniculus	97.56	3.00e-68	249.00
IUUC-Oga-089042	Otolemur garnettii	100.00	2.00e-69	254.00
IUUC-Oar-089400	Ovis aries	97.56	2.00e-68	250.00
IUUC-Ptr-091264	Pan troglodytes	98.37	1.00e-68	251.00
IUUC-Pan-092931	Papio anubis	97.56	2.00e-68	250.00
IUUC-Pfo-097322	Poecilia formosa	78.69	3.00e-55	207.00
IUUC-Pab-098273	Pongo abelii	98.37	1.00e-68	251.00
IUUC-Rno-105525	Rattus norvegicus	100.00	2.00e-69	253.00
IUUC-Ssl-108605	Sclerotinia sclerotiorum	45.16	1.00e-02	33.90
IUUC-Sly-110960	Solanum lycopersicum	33.33	9.00e-11	60.10
IUUC-Stu-112094	Solanum tuberosum	30.34	8.00e-09	53.90
IUUC-Ssc-115263	Sus scrofa	96.75	3.00e-67	246.00
IUUC-Tru-117994	Takifugu rubripes	77.87	6.00e-54	202.00
IUUC-Tni-120742	Tetraodon nigroviridis	79.51	7.00e-56	209.00
IUUC-Xtr-132218	Xenopus tropicalis	81.30	1.00e-59	221.00
IUUC-Xma-133570	Xiphophorus maculatus	77.87	8.00e-55	206.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence