iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-114222

Ensembl Protein ID

Sb02g042000.1

UniProt Accession

A0A1B6QG14; A0A1B6QG14_SORBI

Genbank Protein ID

KXG36868.1; KXG36869.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000761; CM000761

Gene Name

SORBI_002G405800

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb02g042000	Sb02g042000.1	Sb02g042000.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	1.20e-09	39.1	428	470

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkC 51
            C +Cg  g+    l++C+ C  +fH +C++   e+ lp+ + w+Cp+C
   Q: 428  ECYLCGMDGN----LLCCDGCPAAFHSKCVGVV-EDLLPEGD-WYCPEC 470
           6999*99999....******************9.*******7.****** PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MEALVGRAVR KAFPGYGTFA GVVESYDPGA GYFRVLYEDG DSEEVDADEM AQILVGPAMP 60
SALQQLQHTP PRDSAGWRPK KRRRGDGDGD EDDTSPTPTP DGVVLAVPAT TSEDTEPATP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGGCGC TGGTGGGGCG GGCGGTGCGG AAGGCGTTCC CGGGGTACGG CACCTTCGCG 60
GGCGTCGTGG AGTCGTACGA CCCCGGCGCG GGATACTTCC GCGTGCTCTA CGAGGACGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR018501--DDT_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50827--DDT
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF02791--DDT
PF00628--PHD

SMART

SM00571--DDT
SM00249--PHD

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002974	Amborella trichopoda	35.05	0.00e+00	679.00
IUUC-Ago-007848	Ashbya gossypii	35.79	1.00e-09	57.00
IUUC-Acl-008313	Aspergillus clavatus	52.08	3.00e-10	60.10
IUUC-Afl-008508	Aspergillus flavus	48.21	9.00e-11	61.60
IUUC-Afu-008819	Aspergillus fumigatus	36.97	3.00e-11	63.50
IUUC-Ang-009553	Aspergillus niger	50.00	1.00e-11	64.70
IUUC-Aor-010143	Aspergillus oryzae	48.21	1.00e-10	60.80
IUUC-Ate-010574	Aspergillus terreus	47.92	1.00e-09	57.80
IUUC-Bci-013636	Botrytis cinerea	37.37	6.00e-11	62.80
IUUC-Bdi-014165	Brachypodium distachyon	62.17	0.00e+00	1864.00
IUUC-Bol-015269	Brassica oleracea	32.73	2.00e-165	576.00
IUUC-Cho-024758	Choloepus hoffmanni	26.16	4.00e-18	87.80
IUUC-Cin-025146	Ciona intestinalis	47.17	9.00e-11	62.40
IUUC-Dse-031258	Dothistroma septosporum	38.36	5.00e-09	56.20
IUUC-Dme-032140	Drosophila melanogaster	27.37	2.00e-22	102.00
IUUC-Fox-038014	Fusarium oxysporum	36.17	3.00e-12	67.00
IUUC-Fso-038262	Fusarium solani	39.56	3.00e-13	70.50
IUUC-Ggr-039977	Gaeumannomyces graminis	36.08	1.00e-08	55.50
IUUC-Hvu-047760	Hordeum vulgare	59.32	0.00e+00	1684.00
IUUC-Lpe-051272	Leersia perrieri	59.96	0.00e+00	1627.00
IUUC-Mtr-058758	Medicago truncatula	38.90	3.00e-131	462.00
IUUC-Ont-071737	Oreochromis niloticus	27.90	1.00e-21	99.80
IUUC-Oba-075584	Oryza barthii	60.99	0.00e+00	1622.00
IUUC-Obr-076085	Oryza brachyantha	62.62	0.00e+00	1672.00
IUUC-Ogl-077125	Oryza glaberrima	59.86	0.00e+00	1675.00
IUUC-Ogu-078256	Oryza glumaepatula	59.79	0.00e+00	1707.00
IUUC-Oin-079426	Oryza indica	59.67	0.00e+00	1712.00
IUUC-Olo-080881	Oryza longistaminata	61.39	0.00e+00	1644.00
IUUC-Ome-081742	Oryza meridionalis	58.50	0.00e+00	1710.00
IUUC-Oni-082756	Oryza nivara	59.98	0.00e+00	1716.00
IUUC-Opu-083742	Oryza punctata	61.63	0.00e+00	1702.00
IUUC-Oru-085016	Oryza rufipogon	59.68	0.00e+00	1708.00
IUUC-Pma-094355	Petromyzon marinus	28.78	6.00e-22	100.00
IUUC-Ppe-101582	Prunus persica	37.25	0.00e+00	705.00
IUUC-Sja-107964	Schizosaccharomyces japonicus	31.37	7.00e-10	57.80
IUUC-Spo-108017	Schizosaccharomyces pombe	45.83	2.00e-08	53.50
IUUC-Sit-110833	Setaria italica	77.67	0.00e+00	2387.00
IUUC-Tre-121959	Trichoderma reesei	38.95	1.00e-11	64.70
IUUC-Tvi-122553	Trichoderma virens	40.00	1.00e-11	65.10
IUUC-Tae-125366	Triticum aestivum	54.49	0.00e+00	1649.00
IUUC-Vda-129876	Verticillium dahliae	50.00	2.00e-08	53.50
IUUC-Vvi-131129	Vitis vinifera	44.81	5.00e-115	409.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence