iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000005737.2	ENSLACT00000006521.2	ENSLACP00000006468.2
ENSLACG00000005737.2	ENSLACT00000006520.1	ENSLACP00000006467.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.10e-24	83.6	397	428
UBD/Beta-Prp	1.60e-44	152.5	311	518

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sdtllvsGsdDgtikvWDlr 31
           gHtd vt+  f  ++ +vsGsdD t+kvWDl+
   Q: 397  GHTDTVTSAVFtVGDNVVSGSDDRTVKVWDLK 428
           8*******99*733669*************96 PP

UBD/Beta-Prp

   S: 8    hhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkc..vhtlkghe 94
           +h++v+ + ++  ++++++t+s+d+t  +++v+t  l++sl gh++e t ++ +p++ + vt+s+D t ++wd++++++  v +++gh+
   Q: 311  SHQGVVIAADWLVGGKQVVTASWDRTANLYEVETSELVHSLTGHDQELTHCCTHPTQRLVVTSSRDTTFRLWDFRDPSIhsVNVFQGHT 399
           56666667999999*************************************************************665422889***** PP
   S: 95   dsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl...ktgkllrtltgght 180
           d+v+s  f   gd +vsGs+drt++vwdl++          +d++vn ++v+  +++++  +++r+vrl+d+   + ++l r  ++gh 
   Q: 400  DTVTSAVFTV-GDNVVSGSDDRTVKVWDLKNMRSPI-ATIRTDSAVNRISVSVGQRIIALPHDNRQVRLFDMsgvRLARLPRSNRQGHR 486
           *****99999.********************99887.677778889999999989*****************777778888888888** PP
   S: 181  dsvyslsfdsng..kelvsgsldgtvklwdlq 210
           ++v +++++++     l +++ d++ + w++ 
   Q: 487  RMVCCTAWSEEHptGNLFTCGFDRQAIGWNIN 518
           **********998889*************986 PP

Organism

Latimeria chalumnae

Protein Sequence
(Fasta)

MPVESGSGAA ARQAKQKRKS HSLSIRRTNS SEQERPGIQR EMLEGQDSKL PSAIRNTLLE 60
LFGQIEREFE NLYIENLELR REIDTLNERL AAEGQTIDGA ELSKGQLKAK GNAASHSTSQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACCAAAAAAA TGGCGCCCAC TTACGCCAAT AATTAAGCTT TGACCCCCAC TTAAGCTCAT 60
GTTCCCGGAT GTAAGATGCA ATTTGACAAG AGAGAGAGAG AGAAAAAAAA AATAATACAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR020472--G-protein_beta_WD-40_rep
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

lcm:102361103

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001249	Ailuropoda melanoleuca	83.30	0.00e+00	873.00
IUUC-Apl-003647	Anas platyrhynchos	86.31	0.00e+00	905.00
IUUC-Aca-004759	Anolis carolinensis	86.31	0.00e+00	914.00
IUUC-Ame-011103	Astyanax mexicanus	54.02	4.00e-141	494.00
IUUC-Bta-012718	Bos taurus	83.49	0.00e+00	877.00
IUUC-Cel-018499	Caenorhabditis elegans	38.14	1.00e-91	329.00
IUUC-Cja-019492	Callithrix jacchus	84.03	0.00e+00	905.00
IUUC-Cfa-020199	Canis familiaris	83.11	0.00e+00	896.00
IUUC-Cpo-022500	Cavia porcellus	79.13	0.00e+00	847.00
IUUC-Csa-023567	Chlorocebus sabaeus	84.79	0.00e+00	913.00
IUUC-Cho-025071	Choloepus hoffmanni	60.27	1.00e-166	578.00
IUUC-Cin-025460	Ciona intestinalis	42.89	7.00e-101	360.00
IUUC-Csv-026042	Ciona savignyi	44.42	1.00e-103	370.00
IUUC-Dre-028214	Danio rerio	82.13	0.00e+00	860.00
IUUC-Dno-029826	Dasypus novemcinctus	84.75	0.00e+00	771.00
IUUC-Dor-030967	Dipodomys ordii	84.47	0.00e+00	822.00
IUUC-Dme-031936	Drosophila melanogaster	48.64	5.00e-116	411.00
IUUC-Ete-032452	Echinops telfairi	82.13	0.00e+00	878.00
IUUC-Eca-033278	Equus caballus	83.49	0.00e+00	898.00
IUUC-Eeu-034592	Erinaceus europaeus	72.43	0.00e+00	750.00
IUUC-Fca-036431	Felis catus	83.52	0.00e+00	897.00
IUUC-Fal-037149	Ficedula albicollis	85.74	0.00e+00	900.00
IUUC-Gmo-038476	Gadus morhua	76.84	0.00e+00	766.00
IUUC-Gga-041099	Gallus gallus	86.12	0.00e+00	905.00
IUUC-Gac-042374	Gasterosteus aculeatus	80.34	0.00e+00	808.00
IUUC-Ggo-044683	Gorilla gorilla	77.19	0.00e+00	818.00
IUUC-Hsa-046658	Homo sapiens	84.03	0.00e+00	902.00
IUUC-Itr-048870	Ictidomys tridecemlineatus	85.60	0.00e+00	846.00
IUUC-Loc-052652	Lepisosteus oculatus	89.35	0.00e+00	948.00
IUUC-Laf-053712	Loxodonta africana	83.96	0.00e+00	897.00
IUUC-Mcc-055521	Macaca mulatta	84.79	0.00e+00	913.00
IUUC-Meu-056324	Macropus eugenii	82.32	0.00e+00	842.00
IUUC-Mga-060114	Meleagris gallopavo	85.96	0.00e+00	901.00
IUUC-Mmr-061176	Microcebus murinus	84.98	0.00e+00	915.00
IUUC-Mdo-061888	Monodelphis domestica	86.15	0.00e+00	872.00
IUUC-Mmu-063977	Mus musculus	85.01	0.00e+00	913.00
IUUC-Mpu-066220	Mustela putorius furo	71.71	2.00e-161	561.00
IUUC-Mlu-068155	Myotis lucifugus	84.44	0.00e+00	908.00
IUUC-Nle-069964	Nomascus leucogenys	84.60	0.00e+00	912.00
IUUC-Opr-070925	Ochotona princeps	79.08	1.00e-132	466.00
IUUC-Ont-071317	Oreochromis niloticus	82.16	0.00e+00	837.00
IUUC-Oan-072952	Ornithorhynchus anatinus	86.15	0.00e+00	900.00
IUUC-Ocu-073913	Oryctolagus cuniculus	85.20	0.00e+00	910.00
IUUC-Ola-087024	Oryzias latipes	79.92	0.00e+00	867.00
IUUC-Oga-087945	Otolemur garnettii	84.06	0.00e+00	907.00
IUUC-Oar-089854	Ovis aries	83.68	0.00e+00	871.00
IUUC-Ptr-091486	Pan troglodytes	84.22	0.00e+00	903.00
IUUC-Pan-091738	Papio anubis	84.79	0.00e+00	913.00
IUUC-Psi-093953	Pelodiscus sinensis	85.96	0.00e+00	898.00
IUUC-Pma-094560	Petromyzon marinus	71.83	0.00e+00	764.00
IUUC-Pfo-097222	Poecilia formosa	79.85	0.00e+00	810.00
IUUC-Pab-098778	Pongo abelii	79.66	0.00e+00	842.00
IUUC-Pca-100852	Procavia capensis	80.80	0.00e+00	849.00
IUUC-Pva-103130	Pteropus vampyrus	78.75	2.00e-120	426.00
IUUC-Rno-105848	Rattus norvegicus	76.47	0.00e+00	801.00
IUUC-Sha-106750	Sarcophilus harrisii	86.34	0.00e+00	900.00
IUUC-Sar-113749	Sorex araneus	77.95	0.00e+00	819.00
IUUC-Ssc-115691	Sus scrofa	84.03	0.00e+00	872.00
IUUC-Tgu-117365	Taeniopygia guttata	85.74	0.00e+00	860.00
IUUC-Tru-117595	Takifugu rubripes	80.46	0.00e+00	820.00
IUUC-Tsy-118973	Tarsius syrichta	69.70	9.00e-140	489.00
IUUC-Tni-120545	Tetraodon nigroviridis	79.21	0.00e+00	855.00
IUUC-Tbe-127976	Tupaia belangeri	74.10	1.00e-154	539.00
IUUC-Ttr-128472	Tursiops truncatus	81.56	0.00e+00	868.00
IUUC-Xtr-132621	Xenopus tropicalis	86.31	0.00e+00	896.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence