iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-130892

UUCD1 version

UUC-ViV-00502

Ensembl Protein ID

VIT_18s0001g06640.t01

UniProt Accession

F6H0Y5; F6H0Y5_VITVI

Genbank Protein ID

CCB45607.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN595227

Gene Name

VIT_18s0001g06640

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_18s0001g06640	VIT_18s0001g06640.t01	VIT_18s0001g06640.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.00e-08	35.2	160	202

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl++f  ++ +++lp C+H+fh  C+  w       s + +CPlCr
   Q: 160  CSVCLSEFqeDETLRLLPkCNHAFHIPCIDTW------LSSHTNCPLCR 202
           ********8745599999**************......**********8 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MAMKHRKLFP TQTATNQSVD CLDFCDSTCP YNCYIYPDSL IPPPPPASPR PPTLSTLDQN 60
DSPNISPYVI ITVALLAGFF LLVCFNAIIV KYCCGWRRRN RSPPSESDGR DEEFLDENRG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAGAAGGCTA AAGCCTAAAA TGAGCAACCT AAATCACAGA GTGCCTCTTC ACTCCATCTC 60
GAGGACCAGA GCAGGGCGGG GAGTGGTTGA AAAGCGAAAG AGACCACAAA CCTTCTTTAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006062	Arabidopsis lyrata	44.24	1.00e-51	196.00
IUUC-Ath-007035	Arabidopsis thaliana	44.07	5.00e-48	184.00
IUUC-Bol-015703	Brassica oleracea	50.22	8.00e-51	193.00
IUUC-Bra-016736	Brassica rapa	50.22	4.00e-51	194.00
IUUC-Cin-025662	Ciona intestinalis	42.47	3.00e-12	65.50
IUUC-Gma-044241	Glycine max	45.15	1.00e-69	255.00
IUUC-Mtr-058178	Medicago truncatula	47.89	3.00e-60	224.00
IUUC-Pno-095037	Phaeosphaeria nodorum	38.37	2.00e-11	62.80
IUUC-Ppa-095182	Physcomitrella patens	44.29	1.00e-27	117.00
IUUC-Pop-099872	Populus trichocarpa	53.26	1.00e-95	342.00
IUUC-Ppe-101257	Prunus persica	45.19	4.00e-57	213.00
IUUC-Sly-111911	Solanum lycopersicum	59.07	6.00e-65	239.00
IUUC-Stu-112635	Solanum tuberosum	56.17	1.00e-65	242.00
IUUC-Tca-120964	Theobroma cacao	52.88	4.00e-92	330.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence