iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000041239.6	ENSDART00000143172.3	ENSDARP00000122610.2
ENSDARG00000041239.6	ENSDART00000060455.4	ENSDARP00000060454.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.00e-10	42.4	266	294

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 7    tclaf.sd.tllvsGsdDgtikvWDlrtg 33
            c+++ +d +++v+G+ D  + vW++++ 
   Q: 266  LCVCWsPDgRYIVTGGEDDLVTVWSFSDS 294
           6*****999***************98765 PP

Organism

Danio rerio

Protein Sequence
(Fasta)

MAAEGGGKEA NEIKTQFSTR EGVYKLLPNS EYSRPNRVPF NSQGSNPVKV SFVNVNDQSG 60
NGERICFNVG RELYFYIYKG VKKAADLSKP IDKRIYKGTL PTCHDSNALT ATAESVSLLV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGCGCGCGCT GAGGAGGAGG CGCGCGCGCA TGCTCGTGCA CCCAGCAGCG GAATGAATAC 60
TAATATCCAA GATGGCGGCG GAGGGAGGAG GGAAGGAGGC GAACGAGATT AAAACTCAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0016579--P:protein deubiquitination

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Acl-008348	Aspergillus clavatus	34.41	5.00e-55	208.00
IUUC-Cin-025617	Ciona intestinalis	50.45	1.00e-89	322.00
IUUC-Dse-031362	Dothistroma septosporum	25.58	6.00e-48	185.00
IUUC-Gma-043670	Glycine max	38.66	6.00e-56	212.00
IUUC-Meu-056033	Macropus eugenii	51.89	3.00e-124	439.00
IUUC-Ogu-078225	Oryza glumaepatula	35.77	2.00e-47	184.00
IUUC-Pgr-103681	Puccinia graminis	25.05	7.00e-34	139.00
IUUC-Tme-126969	Tuber melanosporum	35.80	5.00e-55	209.00
IUUC-Vvi-131155	Vitis vinifera	37.65	2.00e-54	206.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence