iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vvi-130973

Ensembl Protein ID

VIT_08s0040g01960.t01

UniProt Accession

F6HR18; F6HR18_VITVI

Genbank Protein ID

CCB57067.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN596008

Gene Name

VIT_08s0040g01960

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_08s0040g01960	VIT_08s0040g01960.t01	VIT_08s0040g01960.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.80e-18	66.4	301	330

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 4    dsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           +s++++ f +d  ++++ ++Dg ++v+D++
   Q: 301  GSINGVTFsTDgAYIATVGRDGYLRVFDFS 330
           58******9888****************76 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MINTTNGMMS PSSSSATNNA QSPGLKTYFK TPEGRYKLHY EKTHPAGLLH YGHGKTVTQV 60
TLAHLKDKPV SASPPAPPSS YSTGGGVRSA AARFLGGSNG SRALSFVGGN GGSKSVSGNG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCCCCCATTT TCTTCTGTCA TTCTTCCCAC ACTCATTTCG CTCTTCGCCC ACCGTCCCTT 60
CCCTCCACTC CGCCCGCAGT CCGGTAATTC TCTGAATCGA ATCCTAATCG TGAAGCCACT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0016579--P:protein deubiquitination

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000844	Aegilops tauschii	59.83	7.00e-121	426.00
IUUC-Aml-001329	Ailuropoda melanoleuca	31.00	3.00e-54	204.00
IUUC-Atr-002459	Amborella trichopoda	75.46	0.00e+00	775.00
IUUC-Aly-005705	Arabidopsis lyrata	73.70	0.00e+00	802.00
IUUC-Ath-007396	Arabidopsis thaliana	73.35	0.00e+00	802.00
IUUC-Acl-008348	Aspergillus clavatus	31.68	1.00e-53	203.00
IUUC-Afl-008642	Aspergillus flavus	32.03	3.00e-56	212.00
IUUC-Afu-008994	Aspergillus fumigatus	32.35	4.00e-52	198.00
IUUC-Ani-009266	Aspergillus nidulans	32.61	7.00e-58	217.00
IUUC-Ang-009614	Aspergillus niger	32.47	1.00e-58	220.00
IUUC-Aor-010159	Aspergillus oryzae	32.03	3.00e-56	212.00
IUUC-Ate-010476	Aspergillus terreus	32.92	5.00e-56	211.00
IUUC-Bdi-014307	Brachypodium distachyon	68.60	0.00e+00	700.00
IUUC-Bol-015990	Brassica oleracea	77.00	0.00e+00	810.00
IUUC-Bra-017842	Brassica rapa	61.41	0.00e+00	646.00
IUUC-Cpo-022431	Cavia porcellus	34.83	3.00e-48	185.00
IUUC-Cin-025617	Ciona intestinalis	32.05	3.00e-31	128.00
IUUC-Cgl-026394	Colletotrichum gloeosporioides	31.25	4.00e-54	205.00
IUUC-Cme-027228	Cyanidioschyzon merolae	24.26	3.00e-15	77.00
IUUC-Dse-031362	Dothistroma septosporum	33.33	3.00e-60	225.00
IUUC-Fso-038140	Fusarium solani	31.74	3.00e-56	212.00
IUUC-Ggr-039757	Gaeumannomyces graminis	32.04	2.00e-56	213.00
IUUC-Gma-043670	Glycine max	82.33	0.00e+00	837.00
IUUC-Lpe-051378	Leersia perrieri	70.82	0.00e+00	687.00
IUUC-Lma-053071	Leptosphaeria maculans	33.12	6.00e-49	188.00
IUUC-Meu-056033	Macropus eugenii	34.71	3.00e-45	175.00
IUUC-Mor-057249	Magnaporthe oryzae	30.48	2.00e-55	209.00
IUUC-Mpo-057472	Magnaporthe poae	31.13	1.00e-55	209.00
IUUC-Mtr-058649	Medicago truncatula	78.72	0.00e+00	776.00
IUUC-Mla-059179	Melampsora laricipopulina	27.16	7.00e-35	141.00
IUUC-Mmr-061308	Microcebus murinus	34.85	5.00e-49	188.00
IUUC-Nfi-068256	Neosartorya fischeri	32.20	2.00e-58	219.00
IUUC-Ncr-068904	Neurospora crassa	31.11	6.00e-53	201.00
IUUC-Oba-075876	Oryza barthii	63.13	0.00e+00	641.00
IUUC-Obr-076346	Oryza brachyantha	66.73	0.00e+00	686.00
IUUC-Ogl-077048	Oryza glaberrima	67.60	0.00e+00	701.00
IUUC-Ogu-078225	Oryza glumaepatula	65.69	0.00e+00	681.00
IUUC-Oin-079605	Oryza indica	67.60	0.00e+00	701.00
IUUC-Oni-082472	Oryza nivara	65.69	0.00e+00	681.00
IUUC-Opu-083440	Oryza punctata	64.64	0.00e+00	684.00
IUUC-Oru-084205	Oryza rufipogon	63.01	0.00e+00	642.00
IUUC-Osa-086186	Oryza sativa	67.60	0.00e+00	701.00
IUUC-Olu-087793	Ostreococcus lucimarinus	34.10	9.00e-38	150.00
IUUC-Ppa-095812	Physcomitrella patens	60.73	1.00e-178	618.00
IUUC-Pop-099732	Populus trichocarpa	81.28	0.00e+00	826.00
IUUC-Ppe-101762	Prunus persica	79.89	0.00e+00	841.00
IUUC-Pte-104091	Pyrenophora teres	30.18	4.00e-54	205.00
IUUC-Pyt-104509	Pyrenophora triticirepentis	31.62	3.00e-55	208.00
IUUC-Sja-107886	Schizosaccharomyces japonicus	31.51	2.00e-43	169.00
IUUC-Spo-108343	Schizosaccharomyces pombe	32.18	2.00e-44	172.00
IUUC-Ssl-108563	Sclerotinia sclerotiorum	33.65	2.00e-44	172.00
IUUC-Smo-108850	Selaginella moellendorffii	66.22	0.00e+00	654.00
IUUC-Sit-110829	Setaria italica	67.85	0.00e+00	710.00
IUUC-Sly-111715	Solanum lycopersicum	80.48	0.00e+00	779.00
IUUC-Stu-112818	Solanum tuberosum	79.84	0.00e+00	790.00
IUUC-Sar-113582	Sorex araneus	39.15	7.00e-43	167.00
IUUC-Sbi-114804	Sorghum bicolor	67.30	0.00e+00	676.00
IUUC-Tca-121339	Theobroma cacao	84.76	0.00e+00	867.00
IUUC-Tre-122206	Trichoderma reesei	31.53	6.00e-49	187.00
IUUC-Tvi-122377	Trichoderma virens	32.30	4.00e-50	191.00
IUUC-Tae-125451	Triticum aestivum	66.92	0.00e+00	697.00
IUUC-Tme-126969	Tuber melanosporum	30.14	3.00e-56	212.00
IUUC-Vda-129875	Verticillium dahliae	31.24	8.00e-58	217.00
IUUC-Zma-135897	Zea mays	69.76	0.00e+00	672.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence