iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sha-106512

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AEFK01124757

Gene Name

RNF19B

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSHAG00000012574.1	ENSSHAT00000014854.1	ENSSHAP00000014729.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RBR	6.10e-52	177.0	8	207

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RBR

   S: 1    CkvCllelsveeltvlleCehtfCkeClkqylelkikegqvteiscpaaecpekleeseikellveeelykryekllleevveadaalkw 90
           C++Cl++l++e+++ l++C h+ C +Cl++yl+l+i+e++ + +scp  ec+e+l++++i+ ll+++ l+++ye+++l++++++d++++w
   Q: 8    CPLCLVRLPPERAPRLQSCPHRSCLDCLRHYLRLEISESR-VPVSCP--ECSERLNPHDIRLLLADPPLMHKYEEFMLRRYLASDPDCRW 94
           ****************************************.99****..89*************************************** PP
   S: 91   cpapdCslvvllekea..eklevecekcgkefCveCkeewHeglsCkelkeklakteeek......eeaeskelleanskkCpkCkvyie 172
           cpapdC ++v++  +a  +kl++e+e+c++efC++Ck++wH++++C+++++++ +  + +       ++ +++  ++++k+Cp+C++yi+
   Q: 95   CPAPDCGYAVIAYGCAscPKLTCEREGCQTEFCYHCKQIWHPNQTCDMARQQRVQALRVRtkhtsgLSYGQESGPADDIKPCPRCSAYII 184
           *************999899********************************999998888888888788899999*************** PP
   S: 173  k..negCnhmtCakCkaefCwlC 193
           k  +++CnhmtCa C++efCwlC
   Q: 185  KmnDGSCNHMTCAVCGCEFCWLC 207
           997889***************** PP

Organism

Sarcophilus harrisii

Protein Sequence
(Fasta)

PGGDEVECPL CLVRLPPERA PRLQSCPHRS CLDCLRHYLR LEISESRVPV SCPECSERLN 60
PHDIRLLLAD PPLMHKYEEF MLRRYLASDP DCRWCPAPDC GYAVIAYGCA SCPKLTCERE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

NNNNNNNNNN NNNNNNNNNN NNNNNNNNCC CAGAGCCCGG CGGTGACGAA GTGGAGTGCC 60
CGCTGTGCCT GGTGCGCTTG CCGCCCGAAC GCGCTCCGCG CCTGCAGAGC TGCCCGCACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0677--Repeat
KW-0808--Transferase
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR016150--Casein_kin_II_reg-sub_b-sht
IPR031127--E3_UB_ligase_RBR
IPR002867--IBR_dom
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF01485--IBR

SMART

SM00647--IBR

Gene Ontology

GO:0005829--C:cytosol
GO:0016021--C:integral component of membrane
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002183	Ailuropoda melanoleuca	89.58	0.00e+00	1023.00
IUUC-Apl-003468	Anas platyrhynchos	91.94	0.00e+00	870.00
IUUC-Aca-004324	Anolis carolinensis	87.32	0.00e+00	978.00
IUUC-Ame-011813	Astyanax mexicanus	66.84	0.00e+00	695.00
IUUC-Bta-013135	Bos taurus	90.88	0.00e+00	1065.00
IUUC-Cja-019264	Callithrix jacchus	83.65	0.00e+00	934.00
IUUC-Cpo-022502	Cavia porcellus	89.87	0.00e+00	915.00
IUUC-Cho-025032	Choloepus hoffmanni	72.56	0.00e+00	707.00
IUUC-Dre-028769	Danio rerio	66.83	0.00e+00	741.00
IUUC-Dor-030551	Dipodomys ordii	95.98	8.00e-118	417.00
IUUC-Ete-033008	Echinops telfairi	98.05	3.00e-142	498.00
IUUC-Eca-033267	Equus caballus	90.72	0.00e+00	875.00
IUUC-Fca-035520	Felis catus	90.93	0.00e+00	874.00
IUUC-Fal-037090	Ficedula albicollis	90.16	0.00e+00	777.00
IUUC-Gga-041229	Gallus gallus	87.65	0.00e+00	752.00
IUUC-Gac-041619	Gasterosteus aculeatus	69.53	0.00e+00	732.00
IUUC-Hsa-045958	Homo sapiens	92.44	0.00e+00	1076.00
IUUC-Itr-048425	Ictidomys tridecemlineatus	90.91	0.00e+00	927.00
IUUC-Lch-049552	Latimeria chalumnae	83.56	0.00e+00	912.00
IUUC-Loc-051738	Lepisosteus oculatus	67.55	0.00e+00	776.00
IUUC-Laf-054252	Loxodonta africana	87.88	0.00e+00	892.00
IUUC-Meu-055920	Macropus eugenii	97.27	0.00e+00	1009.00
IUUC-Mga-059587	Meleagris gallopavo	88.20	0.00e+00	815.00
IUUC-Mdo-061985	Monodelphis domestica	97.57	0.00e+00	1138.00
IUUC-Mmu-064262	Mus musculus	90.68	0.00e+00	1053.00
IUUC-Mpu-066101	Mustela putorius furo	90.86	0.00e+00	1062.00
IUUC-Mlu-067347	Myotis lucifugus	90.10	0.00e+00	876.00
IUUC-Ont-071298	Oreochromis niloticus	68.84	0.00e+00	751.00
IUUC-Oan-073219	Ornithorhynchus anatinus	89.92	0.00e+00	877.00
IUUC-Ocu-073792	Oryctolagus cuniculus	89.08	0.00e+00	841.00
IUUC-Ola-086499	Oryzias latipes	69.88	0.00e+00	759.00
IUUC-Oga-088812	Otolemur garnettii	93.09	0.00e+00	1029.00
IUUC-Oar-090353	Ovis aries	89.93	0.00e+00	933.00
IUUC-Psi-092988	Pelodiscus sinensis	91.54	0.00e+00	861.00
IUUC-Pfo-096268	Poecilia formosa	66.94	0.00e+00	753.00
IUUC-Pca-100597	Procavia capensis	90.68	0.00e+00	867.00
IUUC-Pva-102542	Pteropus vampyrus	98.94	4.00e-164	571.00
IUUC-Sar-113233	Sorex araneus	89.77	0.00e+00	840.00
IUUC-Ssc-115781	Sus scrofa	90.98	0.00e+00	1113.00
IUUC-Tgu-117384	Taeniopygia guttata	95.25	0.00e+00	772.00
IUUC-Tru-117919	Takifugu rubripes	68.71	0.00e+00	731.00
IUUC-Tsy-119275	Tarsius syrichta	89.22	0.00e+00	863.00
IUUC-Tbe-127335	Tupaia belangeri	97.04	0.00e+00	652.00
IUUC-Ttr-128554	Tursiops truncatus	89.94	0.00e+00	863.00
IUUC-Vpa-130407	Vicugna pacos	84.23	0.00e+00	871.00
IUUC-Xtr-132325	Xenopus tropicalis	84.62	0.00e+00	722.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence