iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sit-110692

Ensembl Protein ID

Si016124m

UniProt Accession

K3YPD3; K3YPD3_SETIT

Genbank Protein ID

KQL28166.1; KQL28167.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM003528; CM003528

Gene Name

LOC101780561; SETIT_016125mg

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Si016125m.g	Si016126m	Si016126m
Si016125m.g	Si016124m	Si016124m

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-32	111.5	495	536
UBD/Beta-Prp	7.40e-66	223.3	326	600

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sd.tllvsGsdDgtikvWDlrtgvllks 38
           gH+ +v+c+++    d ++l++GsdD t kvWD+ t  ++++
   Q: 495  GHSKGVNCVDYftgGDrPYLITGSDDQTAKVWDYQTKSCVQT 536
           8********966*9778*******************999986 PP

UBD/Beta-Prp

   S: 9    hksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdk 108
           +++++++v+ +p +++++++ ++g++ +w+++t+++++s++  + +v++ kf+ ++++ v g++D++i+v++++t + v ++++h+d++++++++p++ +
   Q: 326  RSERVKSVDLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTDLPVRSAKFIARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTQPF 425
           5678999********************************************************************************************* PP
   S: 109  lvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvysls..fdsngkelvsgsldgtvk 205
           ++s s+d  i++wd+++g++  ++++gh++ v+ v+++p++ n ++s+slDrt+++W+l + +   tl g h + v++++     ++++l++gs+d+t k
   Q: 426  VLSSSDDMLIKLWDWDKGWVCTQIFEGHSHYVMQVTFNPKDtNTFASASLDRTIKIWSLGSPDPNFTLDG-HSKGVNCVDyfTGGDRPYLITGSDDQTAK 524
           *******************9999**********************************************9.*********7445566************* PP
   S: 206  lwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnssvisvavlsfgdnvlv 281
           +wd+qt++cv+tl+gh  nv+ v f+p+  ++++gs+Dg++r+W +++  l +tl++  ++v++  +++ +++v++
   Q: 525  VWDYQTKSCVQTLEGHAHNVSAVCFHPELPIIITGSEDGTVRMWHSTTYRLENTLNYGLERVWALGYMKGSRRVVI 600
           ***************************************************************9998666666654 PP

Organism

Setaria italica

Protein Sequence
(Fasta)

MGAKVHPGHP LPSLIACPFP FPPPLPHPSV TPTHSHFFAS SRRHQPPSWF PPLTSSRHPL 60
RRGAAWRAHG LAVVQTASGE WHARAHGRRR GVATARPRRG LWPQRCAGVQ AWGLPRLRHG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGGGCTA AAGTGCACCC TGGACATCCT CTGCCCTCAT TAATTGCTTG TCCGTTTCCC 60
TTTCCCCCAC CCCTCCCGCA CCCCTCCGTC ACACCCACCC ATTCCCATTT TTTTGCCTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR006692--Coatomer_WD-assoc_reg
IPR020472--G-protein_beta_WD-40_rep
IPR011990--TPR-like_helical_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04053--Coatomer_WDAD
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0030117--C:membrane coat
GO:0005198--F:structural molecule activity
GO:0006886--P:intracellular protein transport
GO:0016192--P:vesicle-mediated transport

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002154	Ailuropoda melanoleuca	63.03	0.00e+00	1105.00
IUUC-Apl-003976	Anas platyrhynchos	62.19	0.00e+00	1112.00
IUUC-Aca-004301	Anolis carolinensis	61.97	0.00e+00	1113.00
IUUC-Ago-007914	Ashbya gossypii	46.37	0.00e+00	709.00
IUUC-Ang-009654	Aspergillus niger	57.88	0.00e+00	815.00
IUUC-Ame-010922	Astyanax mexicanus	57.82	0.00e+00	955.00
IUUC-Bdi-015046	Brachypodium distachyon	89.74	0.00e+00	1678.00
IUUC-Cel-018387	Caenorhabditis elegans	55.73	0.00e+00	965.00
IUUC-Cja-019145	Callithrix jacchus	62.95	0.00e+00	1107.00
IUUC-Cfa-020564	Canis familiaris	63.08	0.00e+00	1108.00
IUUC-Cpo-022201	Cavia porcellus	63.03	0.00e+00	1106.00
IUUC-Csa-023383	Chlorocebus sabaeus	67.19	0.00e+00	839.00
IUUC-Cho-024454	Choloepus hoffmanni	60.24	0.00e+00	929.00
IUUC-Cin-025681	Ciona intestinalis	58.33	0.00e+00	991.00
IUUC-Dor-030462	Dipodomys ordii	60.72	0.00e+00	852.00
IUUC-Ete-033166	Echinops telfairi	59.82	0.00e+00	707.00
IUUC-Eca-034180	Equus caballus	61.26	0.00e+00	1062.00
IUUC-Gmo-039046	Gadus morhua	61.33	0.00e+00	1095.00
IUUC-Gga-041112	Gallus gallus	60.98	0.00e+00	1118.00
IUUC-Gac-041733	Gasterosteus aculeatus	62.15	0.00e+00	1067.00
IUUC-Ggo-044984	Gorilla gorilla	62.95	0.00e+00	1107.00
IUUC-Hsa-046698	Homo sapiens	62.83	0.00e+00	1107.00
IUUC-Hvu-047669	Hordeum vulgare	96.61	0.00e+00	725.00
IUUC-Itr-048212	Ictidomys tridecemlineatus	61.97	0.00e+00	1106.00
IUUC-Lpe-051579	Leersia perrieri	90.29	0.00e+00	1637.00
IUUC-Laf-053757	Loxodonta africana	63.00	0.00e+00	1102.00
IUUC-Mcc-054859	Macaca mulatta	62.95	0.00e+00	1108.00
IUUC-Mla-058937	Melampsora laricipopulina	52.92	0.00e+00	887.00
IUUC-Mga-059875	Meleagris gallopavo	60.73	0.00e+00	1113.00
IUUC-Mmr-061261	Microcebus murinus	63.08	0.00e+00	1108.00
IUUC-Mdo-062076	Monodelphis domestica	63.32	0.00e+00	1115.00
IUUC-Mmu-063324	Mus musculus	63.08	0.00e+00	1110.00
IUUC-Mpu-065961	Mustela putorius furo	63.08	0.00e+00	1107.00
IUUC-Nle-069034	Nomascus leucogenys	62.95	0.00e+00	1107.00
IUUC-Opr-070334	Ochotona princeps	63.91	0.00e+00	1003.00
IUUC-Ont-071563	Oreochromis niloticus	62.64	0.00e+00	1100.00
IUUC-Ocu-074522	Oryctolagus cuniculus	63.08	0.00e+00	1105.00
IUUC-Oba-075751	Oryza barthii	85.84	0.00e+00	1592.00
IUUC-Obr-076163	Oryza brachyantha	90.26	0.00e+00	1678.00
IUUC-Oin-079856	Oryza indica	90.75	0.00e+00	1662.00
IUUC-Ome-081554	Oryza meridionalis	86.34	0.00e+00	1571.00
IUUC-Opu-083400	Oryza punctata	88.64	0.00e+00	1657.00
IUUC-Oru-085196	Oryza rufipogon	88.57	0.00e+00	1616.00
IUUC-Oga-088163	Otolemur garnettii	60.53	0.00e+00	1050.00
IUUC-Oar-089842	Ovis aries	62.95	0.00e+00	1109.00
IUUC-Ptr-090501	Pan troglodytes	62.95	0.00e+00	1106.00
IUUC-Pan-092011	Papio anubis	62.95	0.00e+00	1108.00
IUUC-Psi-093308	Pelodiscus sinensis	62.35	0.00e+00	1113.00
IUUC-Pab-097926	Pongo abelii	60.36	0.00e+00	1040.00
IUUC-Pca-100965	Procavia capensis	61.94	0.00e+00	1069.00
IUUC-Pva-102451	Pteropus vampyrus	59.52	0.00e+00	845.00
IUUC-Sha-106905	Sarcophilus harrisii	63.32	0.00e+00	1113.00
IUUC-Sbi-113801	Sorghum bicolor	96.28	0.00e+00	1725.00
IUUC-Ssc-115593	Sus scrofa	62.95	0.00e+00	1107.00
IUUC-Tgu-117239	Taeniopygia guttata	60.71	0.00e+00	1114.00
IUUC-Tru-118025	Takifugu rubripes	60.77	0.00e+00	1099.00
IUUC-Tsy-118824	Tarsius syrichta	59.68	0.00e+00	790.00
IUUC-Tni-120142	Tetraodon nigroviridis	62.23	0.00e+00	1091.00
IUUC-Tae-125385	Triticum aestivum	89.72	0.00e+00	1664.00
IUUC-Tbe-127770	Tupaia belangeri	61.80	0.00e+00	884.00
IUUC-Ttr-129294	Tursiops truncatus	62.83	0.00e+00	1103.00
IUUC-Vda-129716	Verticillium dahliae	54.12	0.00e+00	902.00
IUUC-Xtr-132633	Xenopus tropicalis	63.32	0.00e+00	1112.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence