• HOME
  • BROWSE
  • SEARCH
  • LINK
  • DOWNLOAD
  • USER GUIDE
  • Protein
  • Gene
  • Annotation
  • Classification
  • Domain Profile
  • Function
  • Protein Sequence
  • Nucleotide Sequence
  • Keyword
  • GO
  • Orthology
  • TOP

Tag Content
UUCD2 ID IUUC-Zma-135706
UUCD1 version UUC-ZeM-00718
Ensembl Protein ID Zm00001d016402_T012
UniProt Accession A0A1D6H779; A0A1D6H779_MAIZE
Genbank Protein ID AQK70654.1
Protein Name Coatomer subunit beta'
Genbank Nucleotide ID CM000781
Gene Name ZEAMMB73_Zm00001d016402
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Zm00001d016402 Zm00001d016402_T066 Zm00001d016402_T066
Zm00001d016402 Zm00001d016402_T051 Zm00001d016402_T051
Zm00001d016402 Zm00001d016402_T030 Zm00001d016402_T030
Zm00001d016402 Zm00001d016402_T029 Zm00001d016402_T029
Zm00001d016402 Zm00001d016402_T039 Zm00001d016402_T039
Zm00001d016402 Zm00001d016402_T001 Zm00001d016402_T001
Zm00001d016402 Zm00001d016402_T069 Zm00001d016402_T069
Zm00001d016402 Zm00001d016402_T023 Zm00001d016402_T023
Zm00001d016402 Zm00001d016402_T012 Zm00001d016402_T012
Zm00001d016402 Zm00001d016402_T072 Zm00001d016402_T072
Zm00001d016402 Zm00001d016402_T032 Zm00001d016402_T032
Zm00001d016402 Zm00001d016402_T076 Zm00001d016402_T076
Zm00001d016402 Zm00001d016402_T048 Zm00001d016402_T048
Zm00001d016402 Zm00001d016402_T017 Zm00001d016402_T017
Zm00001d016402 Zm00001d016402_T026 Zm00001d016402_T026
Zm00001d016402 Zm00001d016402_T004 Zm00001d016402_T004
Zm00001d016402 Zm00001d016402_T080 Zm00001d016402_T080
Zm00001d016402 Zm00001d016402_T034 Zm00001d016402_T034
Zm00001d016402 Zm00001d016402_T045 Zm00001d016402_T045
Zm00001d016402 Zm00001d016402_T020 Zm00001d016402_T020
Zm00001d016402 Zm00001d016402_T037 Zm00001d016402_T037
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 3.40e-33 114.2 183 224
UBD/Beta-Prp 7.10e-66 224.4 14 288
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclaf...sd.tllvsGsdDgtikvWDlrtgvllks 38
           gH+ +v+c+++    d ++l++GsdD t kvWD+ t  ++++
   Q: 183  GHSKGVNCVDYftgGDrPYLITGSDDQTAKVWDYQTKSCVQT 224
           8********966*9778*******************999986 PP
   

   UBD/Beta-Prp
   S: 9    hksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvl 98
           +++++++v+ +p +++++++ ++g++ vw+++t+++++s++  + +v++ kf+ ++++ v g++D++i+v++++t + v ++++h+d+++
   Q: 14   RSERVKSVDLHPTEPWILSSLYSGSVCVWNYQTQTMVKSFEVTDLPVRSAKFIARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIR 103
           5678999*********************************************************************************** PP
   S: 99   slsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvysls 187
           +++++p++ +++s s+d  i++wd+++g++  ++++gh++ v+ v+++p++ n ++s+slDrt+++W+l + +   tl g h + v++++
   Q: 104  CVAVHPTQPFVLSSSDDMLIKLWDWDKGWVCTQIFEGHSHYVMQVTFNPKDtNTFASASLDRTIKIWSLGSPDPNFTLDG-HSKGVNCVD 192
           *****************************9999**********************************************9.********* PP
   S: 188  ..fdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnssvisvavlsf 275
                ++++l++gs+d+t k+wd+qt++cv+tl+gh  nv+ v f+p+  ++++gs+Dg++r+W +++  l +tl++  ++v++  +++ 
   Q: 193  yfTGGDRPYLITGSDDQTAKVWDYQTKSCVQTLEGHAHNVSAVCFHPELPIIITGSEDGTVRMWHSTTYRLENTLNYGLERVWALGYMKG 282
           7445566****************************************************************************9998666 PP
   S: 276  gdnvlv 281
           +++v++
   Q: 283  SRRVVI 288
           666654 PP
   
Organism Zea mays
Functional Description
(View)

Functional Description


     The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
 The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
Protein Sequence
(Fasta)
MPLRLDIKRK LAQRSERVKS VDLHPTEPWI LSSLYSGSVC VWNYQTQTMV KSFEVTDLPV 60
RSAKFIARKQ WVVAGADDMF IRVYNYNTMD KVKVFEAHTD YIRCVAVHPT QPFVLSSSDD 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Zma-135706|E3,WD_repeat;UBD,Beta-Prp|Zea mays
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GCTGTATCAC TCCCCTCTCC ACCGCGTCTC TCCTGCATGC TCGTATTCGC AAATCTCCTC 60
CCCTCTCCCC GCGCGGCGCG CCTGCACCTC CCGGTCCGGC GAGAGGCCAC CGCCCGCGCG 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Zma-135706|E3,WD_repeat;UBD,Beta-Prp|Zea mays
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0968--Cytoplasmic vesicle
KW-0931--ER-Golgi transport
KW-0333--Golgi apparatus
KW-0472--Membrane
KW-0653--Protein transport
KW-1185--Reference proteome
KW-0813--Transport
KW-0853--WD repeat
Interpro

IPR006692--Coatomer_WD-assoc_reg
IPR016453--COPB2
IPR020472--G-protein_beta_WD-40_rep
IPR011990--TPR-like_helical_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF04053--Coatomer_WDAD
PF00400--WD40
PRINTS

PR00320--GPROTEINBRPT
SMART

SM00320--WD40
Gene Ontology

GO:0030663--C:COPI-coated vesicle membrane
GO:0000139--C:Golgi membrane
GO:0030117--C:membrane coat
GO:0005198--F:structural molecule activity
GO:0006886--P:intracellular protein transport
GO:0016192--P:vesicle-mediated transport
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-002154 Ailuropoda melanoleuca 61.85 0.00e+00 1119.00
IUUC-Apl-003976 Anas platyrhynchos 60.48 0.00e+00 1125.00
IUUC-Aca-004301 Anolis carolinensis 61.79 0.00e+00 1130.00
IUUC-Aor-009939 Aspergillus oryzae 52.61 0.00e+00 929.00
IUUC-Bdi-015046 Brachypodium distachyon 89.78 0.00e+00 1672.00
IUUC-Cel-018387 Caenorhabditis elegans 54.72 0.00e+00 974.00
IUUC-Cja-019145 Callithrix jacchus 61.78 0.00e+00 1121.00
IUUC-Cfa-020564 Canis familiaris 61.89 0.00e+00 1122.00
IUUC-Cpo-022201 Cavia porcellus 61.85 0.00e+00 1120.00
IUUC-Cre-022938 Chlamydomonas reinhardtii 66.87 0.00e+00 1117.00
IUUC-Cme-027219 Cyanidioschyzon merolae 51.50 0.00e+00 884.00
IUUC-Eca-034180 Equus caballus 60.12 0.00e+00 1075.00
IUUC-Fca-036265 Felis catus 61.36 0.00e+00 1124.00
IUUC-Fal-037202 Ficedula albicollis 59.88 0.00e+00 1077.00
IUUC-Gmo-039046 Gadus morhua 61.09 0.00e+00 1107.00
IUUC-Gga-041112 Gallus gallus 61.21 0.00e+00 1135.00
IUUC-Ggo-044984 Gorilla gorilla 61.78 0.00e+00 1120.00
IUUC-Hsa-046698 Homo sapiens 61.66 0.00e+00 1120.00
IUUC-Hvu-047669 Hordeum vulgare 96.33 0.00e+00 729.00
IUUC-Itr-048212 Ictidomys tridecemlineatus 61.97 0.00e+00 1121.00
IUUC-Lpe-051579 Leersia perrieri 89.69 0.00e+00 1654.00
IUUC-Laf-053757 Loxodonta africana 61.82 0.00e+00 1116.00
IUUC-Mcc-054859 Macaca mulatta 61.78 0.00e+00 1120.00
IUUC-Meu-056174 Macropus eugenii 52.39 1.00e-108 387.00
IUUC-Mla-058937 Melampsora laricipopulina 52.92 0.00e+00 892.00
IUUC-Mga-059875 Meleagris gallopavo 60.96 0.00e+00 1130.00
IUUC-Mmr-061261 Microcebus murinus 61.89 0.00e+00 1122.00
IUUC-Mdo-062076 Monodelphis domestica 61.49 0.00e+00 1129.00
IUUC-Mmu-063324 Mus musculus 61.89 0.00e+00 1123.00
IUUC-Mac-064636 Musa acuminata 83.12 0.00e+00 1567.00
IUUC-Mpu-065961 Mustela putorius furo 61.89 0.00e+00 1120.00
IUUC-Mlu-067059 Myotis lucifugus 61.07 0.00e+00 1105.00
IUUC-Nle-069034 Nomascus leucogenys 61.78 0.00e+00 1120.00
IUUC-Ont-071563 Oreochromis niloticus 60.73 0.00e+00 1113.00
IUUC-Oan-073416 Ornithorhynchus anatinus 61.15 0.00e+00 1062.00
IUUC-Ocu-074522 Oryctolagus cuniculus 61.97 0.00e+00 1118.00
IUUC-Oba-075751 Oryza barthii 85.32 0.00e+00 1585.00
IUUC-Oin-079856 Oryza indica 90.09 0.00e+00 1660.00
IUUC-Ome-081554 Oryza meridionalis 85.68 0.00e+00 1568.00
IUUC-Opu-083400 Oryza punctata 87.43 0.00e+00 1657.00
IUUC-Oru-085196 Oryza rufipogon 88.13 0.00e+00 1619.00
IUUC-Ola-087245 Oryzias latipes 60.40 0.00e+00 1112.00
IUUC-Oga-088163 Otolemur garnettii 58.81 0.00e+00 1065.00
IUUC-Oar-089842 Ovis aries 61.66 0.00e+00 1119.00
IUUC-Ptr-090501 Pan troglodytes 61.78 0.00e+00 1121.00
IUUC-Pan-092011 Papio anubis 61.78 0.00e+00 1121.00
IUUC-Psi-093308 Pelodiscus sinensis 62.20 0.00e+00 1127.00
IUUC-Pma-094695 Petromyzon marinus 54.92 0.00e+00 984.00
IUUC-Pfo-096587 Poecilia formosa 60.44 0.00e+00 1115.00
IUUC-Pab-097926 Pongo abelii 61.18 0.00e+00 1045.00
IUUC-Pop-099634 Populus trichocarpa 83.00 0.00e+00 1544.00
IUUC-Pca-100965 Procavia capensis 61.02 0.00e+00 1084.00
IUUC-Ppe-101470 Prunus persica 83.51 0.00e+00 1587.00
IUUC-Sha-106905 Sarcophilus harrisii 61.61 0.00e+00 1130.00
IUUC-Sja-107838 Schizosaccharomyces japonicus 46.40 0.00e+00 778.00
IUUC-Sit-110692 Setaria italica 96.52 0.00e+00 1704.00
IUUC-Sly-111211 Solanum lycopersicum 82.54 0.00e+00 1494.00
IUUC-Stu-112906 Solanum tuberosum 81.94 0.00e+00 1404.00
IUUC-Sre-115040 Sporisorium reilianum 51.44 0.00e+00 892.00
IUUC-Ssc-115593 Sus scrofa 61.78 0.00e+00 1120.00
IUUC-Tgu-117239 Taeniopygia guttata 60.82 0.00e+00 1131.00
IUUC-Tni-120142 Tetraodon nigroviridis 61.09 0.00e+00 1103.00
IUUC-Tca-121613 Theobroma cacao 83.19 0.00e+00 1598.00
IUUC-Tbe-127770 Tupaia belangeri 61.65 0.00e+00 895.00
IUUC-Ttr-129294 Tursiops truncatus 61.66 0.00e+00 1118.00
IUUC-Uma-129351 Ustilago maydis 49.88 0.00e+00 880.00
IUUC-Xma-133347 Xiphophorus maculatus 60.68 0.00e+00 1117.00
Created Date 25-Jun-2017

https://dev.news.makassarkota.go.id/public/pgsoft-demo/ https://jdih.sumbawabaratkab.go.id/lato/pg-soft-demo/ https://dev.news.makassarkota.go.id/public/slot-gacor/ http://pbb.tanahbumbukab.go.id/-/slot-gacor/ slot gacor https://siakad.unipra.ac.id/sass/slot-gacor-x500/ http://kpm.dinus.ac.id/assets/images/berita/slot/
Copyright © 2004-2017.The CUCKOO Workgroup. All Rights Reserved